DKK2 (dickkopf WNT signaling pathway inhibitor 2) - Rat Genome Database

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Pathways
Gene: DKK2 (dickkopf WNT signaling pathway inhibitor 2) Sus scrofa
Analyze
Symbol: DKK2
Name: dickkopf WNT signaling pathway inhibitor 2
RGD ID: 14225890
Description: ENCODES a protein that exhibits co-receptor binding (inferred); INVOLVED IN negative regulation of canonical Wnt signaling pathway (inferred); negative regulation of Wnt signaling pathway (inferred); positive regulation of canonical Wnt signaling pathway (inferred); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN extracellular region (inferred); extracellular space (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dickkopf-related protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8114,862,247 - 114,974,304 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.18114,862,056 - 114,974,327 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28123,169,059 - 123,280,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DKK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8114,862,247 - 114,974,304 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.18114,862,056 - 114,974,327 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28123,169,059 - 123,280,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DKK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384106,921,802 - 107,036,313 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4106,921,802 - 107,283,806 (-)Ensemblhg38GRCh38
GRCh374107,842,959 - 107,957,470 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364108,062,408 - 108,176,902 (-)NCBIBuild 36Build 36hg18NCBI36
Build 344108,200,564 - 108,315,057NCBI
Celera4105,142,017 - 105,256,526 (-)NCBICelera
Cytogenetic Map4q25NCBI
HuRef4103,577,892 - 103,692,398 (-)NCBIHuRef
CHM1_14107,819,993 - 107,934,463 (-)NCBICHM1_1
T2T-CHM13v2.04110,226,876 - 110,341,391 (-)NCBIT2T-CHM13v2.0
Dkk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393131,791,027 - 131,886,065 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3131,791,053 - 131,886,065 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm383132,085,266 - 132,180,304 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3132,085,292 - 132,180,304 (+)Ensemblmm10GRCm38
MGSCv373131,748,256 - 131,843,268 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv363132,022,607 - 132,117,610 (+)NCBIMGSCv36mm8
Celera3138,511,569 - 138,606,576 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map361.32NCBI
Dkk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82223,242,375 - 223,334,249 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2223,242,377 - 223,334,724 (+)EnsemblGRCr8
mRatBN7.22220,568,338 - 220,660,225 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2220,568,338 - 220,660,225 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2228,216,913 - 228,308,598 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02226,116,586 - 226,208,267 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02220,974,246 - 221,065,929 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2223,076,131 - 223,167,945 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive2223,263,769 - 223,355,572 (+)NCBILyon_Normotensive
Lyon_Hypertensive2222,894,847 - 222,986,665 (+)NCBILyon_Hypertensive
F344_StmMcwi2222,949,941 - 223,042,033 (+)NCBIF344_StmMcwi
Rnor_6.02237,148,918 - 237,240,883 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2237,148,941 - 237,241,350 (+)Ensemblrn6Rnor6.0
Rnor_5.02255,689,579 - 255,781,478 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42229,542,203 - 229,634,156 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2212,811,245 - 212,902,656 (+)NCBICelera
RGSC_v3.12229,529,344 - 229,619,963 (+)NCBI
Cytogenetic Map2q43NCBI
Dkk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554962,489,373 - 2,578,639 (+)Ensembl
ChiLan1.0NW_0049554962,489,373 - 2,578,310 (+)NCBIChiLan1.0ChiLan1.0
DKK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23105,015,174 - 105,130,173 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14105,316,460 - 105,431,125 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0499,428,210 - 99,542,884 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14110,002,933 - 110,117,159 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4110,001,499 - 110,117,326 (-)EnsemblpanPan2panpan1.1
DKK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13227,548,877 - 27,647,039 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3227,550,833 - 27,713,838 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3214,380,145 - 14,478,884 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03227,778,999 - 27,877,746 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3227,779,000 - 27,877,708 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13227,773,574 - 27,872,045 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03227,516,644 - 27,615,395 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03212,241,851 - 12,340,868 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dkk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530113,467,767 - 13,563,668 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936814184,832 - 282,633 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936814184,625 - 280,945 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DKK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1754,875,611 - 54,982,310 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl754,875,627 - 54,982,300 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603733,521,289 - 33,628,173 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dkk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248302,093,797 - 2,186,754 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248302,093,481 - 2,186,497 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dkk2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1326,747,387 - 26,839,706 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in DKK2
2930 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 21 3 4 13 11 21 3 6 1

Sequence


Ensembl Acc Id: ENSSSCT00000058233   ⟹   ENSSSCP00000045342
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl8114,862,247 - 114,974,304 (+)Ensembl
RefSeq Acc Id: XM_003129269   ⟹   XP_003129317
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.18114,862,056 - 114,974,327 (+)NCBI
Sequence:
RefSeq Acc Id: XP_003129317   ⟸   XM_003129269
- UniProtKB: A0A287AN69 (UniProtKB/TrEMBL),   A0A4X1UUA8 (UniProtKB/TrEMBL),   A0A8D0N2C9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000045342   ⟸   ENSSSCT00000058233

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000032094 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015021425 UniProtKB/TrEMBL
  ENSSSCG00025043481 UniProtKB/TrEMBL
  ENSSSCG00030002840 UniProtKB/TrEMBL
  ENSSSCG00035025066 UniProtKB/TrEMBL
  ENSSSCG00040063989 UniProtKB/TrEMBL
  ENSSSCG00045002855 UniProtKB/TrEMBL
  ENSSSCG00055006517 UniProtKB/TrEMBL
  ENSSSCG00060040780 UniProtKB/TrEMBL
  ENSSSCG00065005295 UniProtKB/TrEMBL
  ENSSSCG00070019506 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000058233 ENTREZGENE
  ENSSSCT00000058233.3 UniProtKB/TrEMBL
  ENSSSCT00015028287.1 UniProtKB/TrEMBL
  ENSSSCT00025058963.1 UniProtKB/TrEMBL
  ENSSSCT00030003631.1 UniProtKB/TrEMBL
  ENSSSCT00035032981.1 UniProtKB/TrEMBL
  ENSSSCT00040087379.1 UniProtKB/TrEMBL
  ENSSSCT00045004505.1 UniProtKB/TrEMBL
  ENSSSCT00055012605.1 UniProtKB/TrEMBL
  ENSSSCT00060055256.1 UniProtKB/TrEMBL
  ENSSSCT00065007176.1 UniProtKB/TrEMBL
  ENSSSCT00070038568.1 UniProtKB/TrEMBL
Gene3D-CATH Lipase, subunit A UniProtKB/TrEMBL
InterPro Dickkopf_N UniProtKB/TrEMBL
  DIKK1/2/4_C-subdom1 UniProtKB/TrEMBL
  DIKK1/2/4_C-subdom2 UniProtKB/TrEMBL
  DKK-like UniProtKB/TrEMBL
  Dkk2_Cys1 UniProtKB/TrEMBL
  Dkk2_Cys2 UniProtKB/TrEMBL
KEGG Report ssc:100519672 UniProtKB/TrEMBL
NCBI Gene DKK2 ENTREZGENE
PANTHER DICKKOPF-RELATED PROTEIN 2 UniProtKB/TrEMBL
  PTHR12113 UniProtKB/TrEMBL
Pfam Dickkopf_N UniProtKB/TrEMBL
  DIKK1-2-4_C-subdom1 UniProtKB/TrEMBL
  DIKK1-2-4_C-subdom2 UniProtKB/TrEMBL
UniProt A0A287AN69 ENTREZGENE
  A0A4X1UUA8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0N2C9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A287AN69 UniProtKB/TrEMBL
VGNC ID VGNC:87322 ENTREZGENE