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Gene: CHMP3 (charged multivesicular body protein 3) Sus scrofa

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Symbol:

CHMP3

Name:

charged multivesicular body protein 3

RGD ID:

14133886

Description:

ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); mitotic metaphase chromosome alignment (ortholog); nucleus organization (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN early endosome (ortholog); late endosome (ortholog); midbody (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	58,206,921 - 58,279,248 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	58,206,921 - 58,279,252 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	60,964,960 - 61,037,189 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagosome maturation (IEA)

autophagy (IEA)

endosome to lysosome transport (ISO)

endosome transport via multivesicular body sorting pathway (IBA)

late endosome to lysosome transport (IEA)

late endosome to vacuole transport (IBA)

membrane fission (IEA)

midbody abscission (IEA)

mitotic metaphase chromosome alignment (IEA,ISO)

multivesicular body sorting pathway (IEA)

multivesicular body-lysosome fusion (IEA)

nuclear membrane reassembly (IEA)

nucleus organization (IEA,ISO)

plasma membrane repair (IEA)

positive regulation of cytokinesis (ISO)

protein polymerization (IEA)

protein transport (IBA)

regulation of centrosome duplication (IEA)

regulation of early endosome to late endosome transport (IEA)

regulation of endosome size (ISO)

regulation of exosomal secretion (ISO)

regulation of mitotic spindle assembly (IEA,ISO)

suppression of viral release by host (IEA)

ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (IEA)

vacuolar transport (IEA)

viral budding from plasma membrane (IEA)

viral budding via host ESCRT complex (IEA)

viral release from host cell (IEA)

Cellular Component

amphisome membrane (IEA)

autophagosome membrane (IEA)

cytoplasmic vesicle (IEA)

early endosome (ISO)

ESCRT III complex (IBA,IEA)

kinetochore (IEA)

kinetochore microtubule (IEA)

late endosome (IEA,ISO)

lysosomal membrane (IEA)

midbody (IEA,ISO)

multivesicular body (IBA)

multivesicular body membrane (IEA)

plasma membrane (IEA)

Molecular Function

membrane bending activity (IEA)

molecular function inhibitor activity (ISO)

phosphatidylcholine binding (IEA)

phosphatidylinositol-4,5-bisphosphate binding (ISO)

protein binding (ISO)

ubiquitin-specific protease binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

autophagy pathway (ISO)

References

Additional References at PubMed

PMID:15679890	PMID:30032202

Genomics

Comparative Map Data

CHMP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	58,206,921 - 58,279,248 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	58,206,921 - 58,279,252 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	60,964,960 - 61,037,189 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CHMP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	86,503,430 - 86,563,443 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	86,503,430 - 86,563,507 (-)	Ensembl			hg38	GRCh38
GRCh37	2	86,730,553 - 86,790,566 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	86,584,064 - 86,644,111 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	86,642,210 - 86,702,258	NCBI
Celera	2	86,558,596 - 86,618,513 (-)	NCBI		Celera
Cytogenetic Map	2	p11.2	NCBI
HuRef	2	86,628,305 - 86,688,178 (-)	NCBI		HuRef
CHM1_1	2	86,660,612 - 86,720,561 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	86,505,444 - 86,565,457 (-)	NCBI		T2T-CHM13v2.0

Chmp3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	71,520,820 - 71,559,593 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	71,520,781 - 71,559,593 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	71,543,831 - 71,582,609 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	71,543,797 - 71,582,609 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	71,493,848 - 71,531,568 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	71,473,363 - 71,511,083 (+)	NCBI		MGSCv36	mm8
Celera	6	73,623,309 - 73,665,394 (+)	NCBI		Celera
Cytogenetic Map	6	C1	NCBI
cM Map	6	32.17	NCBI

Chmp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	105,134,860 - 105,180,862 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	105,134,755 - 105,182,262 (+)	Ensembl				GRCr8
mRatBN7.2	4	103,576,453 - 103,622,566 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	103,576,515 - 103,623,959 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	108,959,774 - 109,006,553 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	104,734,897 - 104,781,676 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	103,346,475 - 103,392,244 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	4	106,624,290 - 106,670,027 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	4	104,307,864 - 104,353,610 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	4	104,825,525 - 104,871,305 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	4	104,677,122 - 104,723,885 (+)	NCBI		F344_StmMcwi
Rnor_6.0	4	99,449,213 - 99,496,156 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	99,449,111 - 99,494,423 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	164,228,516 - 164,275,602 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	104,812,177 - 104,857,896 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	92,735,412 - 92,780,550 (+)	NCBI		Celera
RGSC_v3.1	4	105,056,657 - 105,102,377 (+)	NCBI
Cytogenetic Map	4	q32	NCBI

CHMP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	39,816,276 - 39,876,240 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	39,819,055 - 39,879,001 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	86,559,695 - 86,619,615 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	88,105,216 - 88,224,003 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	88,106,242 - 88,165,104 (-)	Ensembl			panPan2	panpan1.1

CHMP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	38,600,793 - 38,658,368 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	38,286,558 - 38,344,133 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	39,333,768 - 39,391,356 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	39,332,859 - 39,393,172 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	38,499,831 - 38,557,408 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	38,536,249 - 38,593,804 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	38,884,203 - 38,941,802 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Chmp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	79,813,720 - 79,834,454 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936712	1,023,989 - 1,044,728 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936712	1,023,994 - 1,044,727 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CHMP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	20,536,490 - 20,654,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	20,594,817 - 20,654,404 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	91,842,572 - 91,903,310 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Chmp3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	16,738,416 - 16,772,391 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	16,738,538 - 16,772,553 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Chmp3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	74,567,087 - 74,615,545 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in CHMP3
2779 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003354734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK231203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK232282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK400025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY609625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU467088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01101811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000031530 ⟹ ENSSSCP00000022901

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	58,206,921 - 58,279,243 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000071331 ⟹ ENSSSCP00000065475

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	58,207,331 - 58,279,242 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000081836 ⟹ ENSSSCP00000074378

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	58,232,403 - 58,279,238 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000101318 ⟹ ENSSSCP00000078302

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	58,236,424 - 58,279,248 (+)	Ensembl

RefSeq Acc Id:

XM_003354734 ⟹ XP_003354782

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	58,206,921 - 58,279,252 (+)	NCBI

Sequence:

show sequence

AGCGTTGACTCCGCCGACCTAAATCTGCGCATGAGTTCGGCGCATGCGCACCAGGACCCCAGCG
GCCGCTCCCGACTCCGGGCGTCCAGCCTCCTCTTCCCTAACCCGCCCCGCCCAGGCGGCTGCCC
GTGACCTGCCTGGGCGCAGGGAACGGAGAGCCGGAAGGGGCAAGACGAGTTCAGTTCACCATGG
GGCTGTTTGGTAAAACCCAAGAGAAGCCGCCCAAAGAGCTGGTCAATGAATGGTCATTGAAAAT
AAGAAAGGAAATGAGAGTTGTTGACAGGCAAATAAGAGATATCCAAAGAGAAGAAGAAAAAGTG
AAACGATCTGTAAAAGATGCTGCCAAGAAGGGTCAGAAGGATGTCTGTGTGGTTCTAGCCAAGG
AGATGATCCGGTCGAGAAAGGCCGTGAGCAAGCTCTATGCATCCAAAGCGCACATGAACTCCGT
GCTCATGGGGATGAAGAACCAGCTGGCGGTTTTGCGAGTGGCTGGTTCCCTGCAGAAGAGCACA
GAGGTGATGAAGGCCATGCAGAGTCTAGTGAAGATCCCAGAAATCCAGGCCACCATGCGAGAGC
TGTCCAAAGAGATGATGAAGGCTGGGATCATAGAAGAGATGTTAGAGGACACTTTTGAAAGCAT
GGACGATCAGGAAGAAATGGAAGAAGCAGCAGAAATGGAAATTGACAAAATTCTGTTTGAAATC
ACCGCAGGGGCCTTGGGCAAAGCACCTAGTAAAGTGACCGACGCCCTCCCAGAGCCTGAACCTC
CAGGAGCCATGGCTGCATCGGAAGATGAGGAGGAGGAAGAGGCCCTGGAGGCCATGCAGTCCCG
TCTGGCCACACTCCGCAGCTAGGACCGCCCGGCTGGGCCACAGGCTCTCTCCTGGCCCAGGCGT
CACCATTTTATTTGTCTCTTGCACTACACTCCTGGGGGAGGCTCTGCATTCTGGAGAATGTTCT
CTGCTAATCTCTCTTCACTCTCTGCAGAGGTTTGGGATCTCAGTGGGATGGTTCTGGAGAGGTG
GTGTAATAAATGCATCATCTTCAGGAGTATAAACAGAAGTATCTCTTGAGGGGCGAGGGCAAAG
AAATCTCACGAAGCGTTTCTGAGGATAGACTTGATTGCCTGAATGTTGAGGACTGTACATTTTT
TTTTGTCTGTAAAACACTATATAAATGGATTTTAATAAATTTCTGCTTTAACATTTGGTCGTA

hide sequence

RefSeq Acc Id:

XM_013995984 ⟹ XP_013851438

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	58,207,315 - 58,279,242 (+)	NCBI

Sequence:

show sequence

CCAGTTGTGGCGAAAGAAAACCTCTGTACCACAGCGCTCCGCAGAGGAGCCGAGGGCTAGGTTA
AGAGTTATGCAGGCTCGGCACGGGGCGCGGAGGCAGCAGCGCCGTCCTGGCCTCTGGAACCCCT
TCCTCTGCCGGCGTTGGTACGTCCCTCCCGGAACCTATCCCGGGCGCAGGCCCCGCCCCCCTCA
GTCCGCCCACGGGCATGGGCGTACCTGCCCGTAGCAGGTGAGCTGTCCTCGAGGACCCCCTTCC
CGATCACGGAGCGGTATAGGCGCTTGCCGCCCTTTCCCCACACAGTGCGGCGTGTTGAGAGGTC
AATGAATGGTCATTGAAAATAAGAAAGGAAATGAGAGTTGTTGACAGGCAAATAAGAGATATCC
AAAGAGAAGAAGAAAAAGTGAAACGATCTGTAAAAGATGCTGCCAAGAAGGGTCAGAAGGATGT
CTGTGTGGTTCTAGCCAAGGAGATGATCCGGTCGAGAAAGGCCGTGAGCAAGCTCTATGCATCC
AAAGCGCACATGAACTCCGTGCTCATGGGGATGAAGAACCAGCTGGCGGTTTTGCGAGTGGCTG
GTTCCCTGCAGAAGAGCACAGAGGTGATGAAGGCCATGCAGAGTCTAGTGAAGATCCCAGAAAT
CCAGGCCACCATGCGAGAGCTGTCCAAAGAGATGATGAAGGCTGGGATCATAGAAGAGATGTTA
GAGGACACTTTTGAAAGCATGGACGATCAGGAAGAAATGGAAGAAGCAGCAGAAATGGAAATTG
ACAAAATTCTGTTTGAAATCACCGCAGGGGCCTTGGGCAAAGCACCTAGTAAAGTGACCGACGC
CCTCCCAGAGCCTGAACCTCCAGGAGCCATGGCTGCATCGGAAGATGAGGAGGAGGAAGAGGCC
CTGGAGGCCATGCAGTCCCGTCTGGCCACACTCCGCAGCTAGGACCGCCCGGCTGGGCCACAGG
CTCTCTCCTGGCCCAGGCGTCACCATTTTATTTGTCTCTTGCACTACACTCCTGGGGGAGGCTC
TGCATTCTGGAGAATGTTCTCTGCTAATCTCTCTTCACTCTCTGCAGAGGTTTGGGATCTCAGT
GGGATGGTTCTGGAGAGGTGGTGTAATAAATGCATCATCTTCAGGAGTATAAACAGAAGTATCT
CTTGAGGGGCGAGGGCAAAGAAATCTCACGAAGCGTTTCTGAGGATAGACTTGATTGCCTGAAT
GTTGAGGACTGTACATTTTTTTTTGTCTGTAAAACACTATATAAATGGATTTTAATAAATTTCT
GCTTTAACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003354782	(Get FASTA)	NCBI Sequence Viewer
	XP_013851438	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000022901
	ENSSSCP00000022901.1
	ENSSSCP00000065475
	ENSSSCP00000065475.2
	ENSSSCP00000074378.1
	ENSSSCP00000078302.1
	ENSSSCP00025045148.1
	ENSSSCP00025045176.1
	ENSSSCP00025045206.1
	ENSSSCP00030004955.1
	ENSSSCP00030004962.1
	ENSSSCP00030004968.1
	ENSSSCP00035001519.1
	ENSSSCP00035001524.1
	ENSSSCP00035001526.1
	ENSSSCP00055026142.1
	ENSSSCP00055026181.1
	ENSSSCP00055026219.1
	ENSSSCP00070049254.1
	ENSSSCP00070049255.1

RefSeq Acc Id:	XP_003354782 ⟸ XM_003354734
- Peptide Label:	isoform X1
- UniProtKB:	I3LFQ9 (UniProtKB/TrEMBL), A0A4X1W457 (UniProtKB/TrEMBL), A0A4X1VZF9 (UniProtKB/TrEMBL), A0A8D0YCW1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLA KEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPE PPGAMAASEDEEEEEALEAMQSRLATLRS hide sequence

RefSeq Acc Id:	XP_013851438 ⟸ XM_013995984
- Peptide Label:	isoform X2
- UniProtKB:	A0A5G2QU03 (UniProtKB/TrEMBL), A0A4X1VZF9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMG MKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQ EEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEALEAMQSRLAT LRS hide sequence

Ensembl Acc Id:

ENSSSCP00000022901 ⟸ ENSSSCT00000031530

Ensembl Acc Id:

ENSSSCP00000065475 ⟸ ENSSSCT00000071331

Ensembl Acc Id:

ENSSSCP00000074378 ⟸ ENSSSCT00000081836

Ensembl Acc Id:

ENSSSCP00000078302 ⟸ ENSSSCT00000101318

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000008222	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025074126	UniProtKB/TrEMBL
	ENSSSCG00030008225	UniProtKB/TrEMBL
	ENSSSCG00035003642	UniProtKB/TrEMBL
	ENSSSCG00055016609	UniProtKB/TrEMBL
	ENSSSCG00070028888	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000031530	ENTREZGENE
	ENSSSCT00000031530.4	UniProtKB/TrEMBL
	ENSSSCT00000071331	ENTREZGENE
	ENSSSCT00000071331.2	UniProtKB/TrEMBL
	ENSSSCT00000081836.1	UniProtKB/TrEMBL
	ENSSSCT00000101318.1	UniProtKB/TrEMBL
	ENSSSCT00025102080.1	UniProtKB/TrEMBL
	ENSSSCT00025102134.1	UniProtKB/TrEMBL
	ENSSSCT00025102201.1	UniProtKB/TrEMBL
	ENSSSCT00030011163.1	UniProtKB/TrEMBL
	ENSSSCT00030011171.1	UniProtKB/TrEMBL
	ENSSSCT00030011181.1	UniProtKB/TrEMBL
	ENSSSCT00035004518.1	UniProtKB/TrEMBL
	ENSSSCT00035004532.1	UniProtKB/TrEMBL
	ENSSSCT00035004538.1	UniProtKB/TrEMBL
	ENSSSCT00055032820.1	UniProtKB/TrEMBL
	ENSSSCT00055032861.1	UniProtKB/TrEMBL
	ENSSSCT00055032911.1	UniProtKB/TrEMBL
	ENSSSCT00070057934.1	UniProtKB/TrEMBL
	ENSSSCT00070057935.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.1230	UniProtKB/TrEMBL
InterPro	Snf7_fam	UniProtKB/TrEMBL
KEGG Report	ssc:100522249	UniProtKB/TrEMBL
NCBI Gene	CHMP3	ENTREZGENE
PANTHER	PTHR10476	UniProtKB/TrEMBL
Pfam	Snf7	UniProtKB/TrEMBL
UniProt	A0A4X1VZF9	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1W457	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2QU03	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0IZJ7_PIG	UniProtKB/TrEMBL
	A0A8D0TE27_PIG	UniProtKB/TrEMBL
	A0A8D0YCW1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1U4F1_PIG	UniProtKB/TrEMBL
	A0A8W4FG57_PIG	UniProtKB/TrEMBL
	I3LFQ9	ENTREZGENE
UniProt Secondary	A0A5G2RGZ7	UniProtKB/TrEMBL
	I3LFQ9	UniProtKB/TrEMBL
VGNC ID	VGNC:106570	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations