PRSS12 (serine protease 12) - Rat Genome Database

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Pathways
Gene: PRSS12 (serine protease 12) Sus scrofa
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Symbol: PRSS12
Name: serine protease 12
RGD ID: 14122203
Description: ENCODES a protein that exhibits hydrolase activity (inferred); peptidase activity (inferred); serine-type endopeptidase activity (inferred); INVOLVED IN proteolysis (ortholog); zymogen activation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 1 (ortholog); intellectual disability (ortholog); long QT syndrome (ortholog); FOUND IN axon (inferred); cytoplasmic vesicle (inferred); dendrite (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neurotrypsin; protease, serine 12
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8105,121,529 - 105,197,141 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.18105,121,529 - 105,197,142 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28112,836,262 - 112,911,646 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
exocytosis  (IEA)
proteolysis  (IEA,ISO)
zymogen activation  (IBA,ISO)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
PRSS12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8105,121,529 - 105,197,141 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.18105,121,529 - 105,197,142 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28112,836,262 - 112,911,646 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRSS12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384118,280,038 - 118,353,003 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4118,280,038 - 118,353,003 (-)Ensemblhg38GRCh38
GRCh374119,201,193 - 119,274,158 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364119,421,865 - 119,493,370 (-)NCBIBuild 36Build 36hg18NCBI36
Build 344119,560,019 - 119,631,525NCBI
Celera4116,492,317 - 116,565,055 (-)NCBICelera
Cytogenetic Map4q26NCBI
HuRef4114,936,619 - 115,009,040 (-)NCBIHuRef
CHM1_14119,177,431 - 119,250,161 (-)NCBICHM1_1
T2T-CHM13v2.04121,585,014 - 121,657,983 (-)NCBIT2T-CHM13v2.0
Prss12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393123,240,562 - 123,300,251 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3123,240,562 - 123,300,246 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm383123,446,913 - 123,506,602 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3123,446,913 - 123,506,597 (+)Ensemblmm10GRCm38
MGSCv373123,149,831 - 123,209,520 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv363123,438,935 - 123,498,619 (+)NCBIMGSCv36mm8
Celera3129,878,310 - 129,935,827 (+)NCBICelera
Cytogenetic Map3G1NCBI
cM Map354.58NCBI
Prss12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82214,308,695 - 214,368,679 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2214,308,774 - 214,369,941 (+)EnsemblGRCr8
mRatBN7.22211,624,134 - 211,684,126 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2211,624,134 - 211,684,126 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2219,299,258 - 219,359,183 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02217,199,129 - 217,259,048 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02212,053,382 - 212,113,300 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2214,057,125 - 214,116,824 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive2214,274,103 - 214,333,803 (+)NCBILyon_Normotensive
Lyon_Hypertensive2213,893,862 - 213,953,562 (+)NCBILyon_Hypertensive
F344_StmMcwi2213,948,125 - 214,007,827 (+)NCBIF344_StmMcwi
Rnor_6.02227,657,983 - 227,717,884 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2227,657,983 - 227,717,884 (+)Ensemblrn6Rnor6.0
Rnor_5.02247,015,139 - 247,074,636 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42220,194,590 - 220,254,502 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2204,036,064 - 204,095,891 (+)NCBICelera
RGSC_v3.12220,157,651 - 220,217,564 (+)NCBI
Cytogenetic Map2q42NCBI
Prss12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542821,574,947 - 21,644,539 (+)Ensembl
ChiLan1.0NW_00495542821,574,947 - 21,644,909 (+)NCBIChiLan1.0ChiLan1.0
PRSS12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23116,316,460 - 116,391,208 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14116,613,235 - 116,687,963 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04110,727,731 - 110,801,258 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14121,279,868 - 121,352,783 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4121,279,868 - 121,353,151 (-)EnsemblpanPan2panpan1.1
PRSS12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13237,509,662 - 37,586,933 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3237,509,124 - 37,587,155 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha324,487,268 - 4,564,942 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03237,730,129 - 37,808,285 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3237,730,142 - 37,808,489 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13237,753,268 - 37,831,362 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03237,476,304 - 37,554,549 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0322,249,097 - 2,327,432 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Prss12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530167,819,767 - 67,846,476 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936869651,373 - 711,168 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRSS12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1766,027,172 - 66,101,563 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl766,025,613 - 66,101,549 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603744,859,539 - 44,939,830 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prss12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248675,338,463 - 5,451,160 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248675,341,202 - 5,450,977 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Prss12
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1336,295,245 - 36,355,698 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in PRSS12
2797 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000009981   ⟹   ENSSSCP00000009723
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl8105,121,529 - 105,197,141 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000073320   ⟹   ENSSSCP00000064688
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl8105,121,388 - 105,197,142 (+)Ensembl
RefSeq Acc Id: XM_003129227   ⟹   XP_003129275
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.18105,121,529 - 105,197,142 (+)NCBI
Sequence:
RefSeq Acc Id: XP_003129275   ⟸   XM_003129227
- UniProtKB: F1S153 (UniProtKB/TrEMBL),   A0A8D1ESU7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000009723   ⟸   ENSSSCT00000009981
Ensembl Acc Id: ENSSSCP00000064688   ⟸   ENSSSCT00000073320
Protein Domains
Kringle   Peptidase S1   SRCR


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000009114 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015057734 UniProtKB/TrEMBL
  ENSSSCG00025068871 UniProtKB/TrEMBL
  ENSSSCG00030000178 UniProtKB/TrEMBL
  ENSSSCG00040046708 UniProtKB/TrEMBL
  ENSSSCG00045007679 UniProtKB/TrEMBL
  ENSSSCG00050031622 UniProtKB/TrEMBL
  ENSSSCG00055030079 UniProtKB/TrEMBL
  ENSSSCG00060047460 UniProtKB/TrEMBL
  ENSSSCG00065017700 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000009981 ENTREZGENE
  ENSSSCT00000009981.5 UniProtKB/TrEMBL
  ENSSSCT00015077032.1 UniProtKB/TrEMBL
  ENSSSCT00015077252.1 UniProtKB/TrEMBL
  ENSSSCT00025094630.1 UniProtKB/TrEMBL
  ENSSSCT00030000278.1 UniProtKB/TrEMBL
  ENSSSCT00040062889.1 UniProtKB/TrEMBL
  ENSSSCT00045012838.1 UniProtKB/TrEMBL
  ENSSSCT00050042511.1 UniProtKB/TrEMBL
  ENSSSCT00055059806.1 UniProtKB/TrEMBL
  ENSSSCT00060064431.1 UniProtKB/TrEMBL
  ENSSSCT00065023523.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL
  2.40.20.10 UniProtKB/TrEMBL
  3.10.250.10 UniProtKB/TrEMBL
InterPro Kringle UniProtKB/TrEMBL
  Kringle-like UniProtKB/TrEMBL
  Kringle_CS UniProtKB/TrEMBL
  Kringle_sf UniProtKB/TrEMBL
  Peptidase_S1_PA UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/TrEMBL
  SRCR UniProtKB/TrEMBL
  SRCR-like_dom_sf UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
KEGG Report ssc:100524882 UniProtKB/TrEMBL
NCBI Gene PRSS12 ENTREZGENE
PANTHER DELETED IN MALIGNANT BRAIN TUMORS 1 PROTEIN-RELATED UniProtKB/TrEMBL
  EGG PEPTIDE SPERACT RECEPTOR UniProtKB/TrEMBL
  SCAVENGER RECEPTOR DOMAIN-CONTAINING UniProtKB/TrEMBL
  SRCR DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam Kringle UniProtKB/TrEMBL
  SRCR UniProtKB/TrEMBL
  Trypsin UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/TrEMBL
  SPERACTRCPTR UniProtKB/TrEMBL
PROSITE KRINGLE_1 UniProtKB/TrEMBL
  KRINGLE_2 UniProtKB/TrEMBL
  SRCR_1 UniProtKB/TrEMBL
  SRCR_2 UniProtKB/TrEMBL
  TRYPSIN_DOM UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
SMART SM00130 UniProtKB/TrEMBL
  SM00202 UniProtKB/TrEMBL
  Tryp_SPc UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/TrEMBL
  SSF56487 UniProtKB/TrEMBL
  SSF57440 UniProtKB/TrEMBL
UniProt A0A8D0PAX2_PIG UniProtKB/TrEMBL
  A0A8D0T699_PIG UniProtKB/TrEMBL
  A0A8D0V3V6_PIG UniProtKB/TrEMBL
  A0A8D1ESU7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1KS41_PIG UniProtKB/TrEMBL
  A0A8D1M2K2_PIG UniProtKB/TrEMBL
  A0A8D1S5U0_PIG UniProtKB/TrEMBL
  A0A8D1XQ91_PIG UniProtKB/TrEMBL
  F1S153 ENTREZGENE, UniProtKB/TrEMBL
  Q5G3K3_PIG UniProtKB/TrEMBL
VGNC ID VGNC:91877 ENTREZGENE