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Gene: Or14j10b (olfactory receptor family 14 subfamily J member 10B) Rattus norvegicus

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No known orthologs.

Symbol:

Or14j10b (Ensembl: Or14j3b)

Name:

olfactory receptor family 14 subfamily J member 10B (Ensembl:olfactory receptor family 14 subfamily J member 3B)

RGD ID:

1333667

Description:

Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in plasma membrane; INTERACTS WITH cadmium dichloride.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

LOC100910936; olfactory receptor 14J1-like; olfactory receptor 1705; olfactory receptor gene Olr1705; olfactory receptor Olr1705; Olr1705

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	839,072 - 840,010 (+)	NCBI		GRCr8
mRatBN7.2	20	833,814 - 834,752 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	824,274 - 825,212 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	857,064 - 858,002 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	860,522 - 861,460 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	809,599 - 810,537 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	1,129,826 - 1,134,755 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	1,133,709 - 1,134,647 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	20	1,021,594 - 1,022,532 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	1,131,019 - 1,131,957 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	792,620 - 793,558 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	792,619 - 793,558 (+)	NCBI
Celera	20	1,601,330 - 1,602,268 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

cadmium dichloride (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

detection of chemical stimulus involved in sensory perception of smell (IEA)

G protein-coupled receptor signaling pathway (IEA)

Cellular Component

plasma membrane (IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

odorant binding (IBA)

olfactory receptor activity (IBA,IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

taste/olfaction phenotype (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Genome sequence of the Brown Norway rat yields insights into mammalian evolution.	Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

Variants in Or14j10b
67 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	227
Count of miRNA genes:	164
Interacting mature miRNAs:	174
Transcripts:	ENSRNOT00000071933, ENSRNOT00000075252
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7387283	Uae44	Urinary albumin excretion QTL 44		0.1712	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	20	1	26123605	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600972	Rat
1354642	Despr15	Despair related QTL 15		0.0027	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	20	1	24159021	Rat
1600382	Edcs3	Endometrial carcinoma susceptibility QTL3	3.5	0.003	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	20	1	25159026	Rat
8694189	Bw153	Body weight QTL 153	3.13	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	20	1	29191651	Rat
724519	Bp144	Blood pressure QTL 144		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	20	1	3624629	Rat
9590109	Sffal8	Serum free fatty acids level QTL 8	5.32	0.01	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	20	1	29191651	Rat
9590275	Scort15	Serum corticosterone level QTL 15	3.48	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	29191651	Rat
9589155	Insul32	Insulin level QTL 32	6.38	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	29191651	Rat
7411650	Foco23	Food consumption QTL 23	20.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	29191651	Rat
2317851	Alcrsp22	Alcohol response QTL 22	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
1641893	Alcrsp7	Alcohol response QTL 7			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27339237	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578807	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600972	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001000887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000071933 ⟹ ENSRNOP00000065565

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	1,021,594 - 1,022,532 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000075252 ⟹ ENSRNOP00000063991

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	20	1,133,709 - 1,134,647 (+)	Ensembl

RefSeq Acc Id:

NM_001000887 ⟹ NP_001000887

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	839,072 - 840,010 (+)	NCBI
mRatBN7.2	20	833,814 - 834,752 (+)	NCBI
Rnor_6.0	20	1,133,709 - 1,134,647 (+)	NCBI
Rnor_5.0	20	1,131,019 - 1,131,957 (+)	NCBI
RGSC_v3.4	20	792,620 - 793,558 (+)	RGD
Celera	20	1,601,330 - 1,602,268 (+)	RGD

Sequence:

show sequence

ATGATTGTGAAAAATATAACCACAATGACTGGATTTCTCCTCATGGGGTTCTCTGACAACCATG
AGCTGCAGATCTTACAAGCTTTGCTCTTCTTGGTGACATACCTATTGGGCTCAGCAGGTAACTT
CATCATTATCACCATCATAACACTGGACCCTCAGCTCCAGTCTCCAATGTATTACTTTCTGAAG
CACCTTTCCATTCTGGACCTCTCATCCCTCTCTGTCACAGTTCCTCAGTATGTTGAGAGTTCCC
TGGCACGTAGTGGCTACATTTCATATGGCCAGTGCATGCTGCAGGTTTTTTTCTTCACAGCTTT
GGCCTGGAGTGAAATGGCCATTCTCACAGTGATGTCTTATGACCGCTATGTGGCCATCTGCCTC
CCACTGCACTATGAGGTCATCATGGGTCCCAGAAAGTGTACTTGGGCTGTGGCAGCTGTGTGGC
TATGTGGAAGCATCCCAGGAACATTATACACAGCAAGTATACTCTCTATCAGATTCTGTGGGGA
CAAAATAATTCACCAGTTCTTCTGTGATGTCCCCCAGTTGCTCAAGCTCTCCTGCTCTAATGAT
CACCTTGATATAATTGGAATGATTGATTTCCTGTCTGTAATTACCTTTGCCTGCTTGATTGGGA
TCATCATCTCCTATGTCCACATATTCTCCACAGTTCTCAGGATGCCCTCTGCTGAGAGCAGGTC
TAAGGTCTTCTCTACTTGCCTGCCCCACCTTTTTGTTGTCTCATTGTTTCTTTCTTCAGGTGCC
TGTGCATATCTAAACCCAACCTCAGACTCTCCAACTGCTTTTGAGTTCTTATTCTCTGTATTCT
ACACAGTACTACCTCCAACTCTCAACCCTCTTATTTACAGTCTGAGAAATGAGACCATAAAGAG
TGTTGTAAGGAAGTTACTGTTTAGTACAAAATTCACTGGGTAG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001000887	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000078128.1

RefSeq Acc Id:

NP_001000887 ⟸ NM_001000887

- UniProtKB:

A0A8I5ZJP2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MIVKNITTMTGFLLMGFSDNHELQILQALLFLVTYLLGSAGNFIIITIITLDPQLQSPMYYFLK
HLSILDLSSLSVTVPQYVESSLARSGYISYGQCMLQVFFFTALAWSEMAILTVMSYDRYVAICL
PLHYEVIMGPRKCTWAVAAVWLCGSIPGTLYTASILSIRFCGDKIIHQFFCDVPQLLKLSCSND
HLDIIGMIDFLSVITFACLIGIIISYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVSLFLSSGA
CAYLNPTSDSPTAFEFLFSVFYTVLPPTLNPLIYSLRNETIKSVVRKLLFSTKFTG

hide sequence

Ensembl Acc Id:

ENSRNOP00000063991 ⟸ ENSRNOT00000075252

Ensembl Acc Id:

ENSRNOP00000065565 ⟸ ENSRNOT00000071933

Protein Domains

G-protein coupled receptors family 1 profile

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R3S0-F1-model_v2	AlphaFold	M0R3S0	1-312	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1333667	AgrOrtholog
BioCyc Gene	G2FUF-5050	BioCyc
Ensembl Genes	ENSRNOG00000048714	Ensembl
	ENSRNOG00000049753	Ensembl
	ENSRNOG00000064704	Ensembl
	ENSRNOG00000070514	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000101825.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Olfact_rcpt	UniProtKB/TrEMBL
	Olfactory_GPCR	UniProtKB/TrEMBL
NCBI Gene	405188	ENTREZGENE
PANTHER	OLFACTORY RECEPTOR	UniProtKB/TrEMBL
	OLFACTORY RECEPTOR-RELATED	UniProtKB/TrEMBL
Pfam	7tm_4	UniProtKB/TrEMBL
PhenoGen	Or14j10b	PhenoGen
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	OLFACTORYR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000048714	RatGTEx
	ENSRNOG00000049753	RatGTEx
	ENSRNOG00000064704	RatGTEx
	ENSRNOG00000070514	RatGTEx
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A8I5ZJP2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-08-16	Or14j10b	olfactory receptor family 14 subfamily J member 10B	Olr1705	olfactory receptor 1705	Symbol and Name Changed	1299863	APPROVED
2021-03-09	Olr1705	olfactory receptor 1705	LOC100910936	olfactory receptor 14J1-like	Data merged from RGD:6495953	737654	PROVISIONAL
2012-07-05	LOC100910936	olfactory receptor 14J1-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	Olr1705	olfactory receptor 1705	Olr1705_predicted	olfactory receptor 1705 (predicted)	'predicted' is removed	2292626	APPROVED
2005-02-04	Olr1705_predicted	olfactory receptor 1705 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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