Eif3g (eukaryotic translation initiation factor 3, subunit G) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Eif3g (eukaryotic translation initiation factor 3, subunit G) Rattus norvegicus
Analyze
Symbol: Eif3g
Name: eukaryotic translation initiation factor 3, subunit G
RGD ID: 1307191
Description: Predicted to enable RNA binding activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in translational initiation and viral translational termination-reinitiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Orthologous to human EIF3G (eukaryotic translation initiation factor 3 subunit G); PARTICIPATES IN translation initiation pathway; RNA transport pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: eIF-3 RNA-binding subunit; eIF-3-delta; eIF3 p42; eIF3 p44; Eif3s4; eukaryotic translation initiation factor 3 RNA-binding subunit; eukaryotic translation initiation factor 3 subunit 4; eukaryotic translation initiation factor 3 subunit G; eukaryotic translation initiation factor 3, subunit 4 (delta); LOC298700
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8827,705,914 - 27,709,946 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl827,705,915 - 27,709,987 (-)EnsemblGRCr8
mRatBN7.2819,429,728 - 19,433,760 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl819,429,643 - 19,433,808 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx823,449,092 - 23,453,123 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0821,746,939 - 21,750,970 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0819,659,410 - 19,663,443 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0821,911,632 - 21,915,664 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl821,911,625 - 21,915,716 (-)Ensemblrn6Rnor6.0
Rnor_5.0821,967,947 - 21,971,979 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4819,915,632 - 19,920,117 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera820,824,729 - 20,828,761 (-)NCBICelera
RGSC_v3.1819,915,632 - 19,920,117 (-)NCBI
Cytogenetic Map8q13NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-citrinin  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (EXP)
2,6-dimethoxyphenol  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Brodifacoum  (EXP)
Butylbenzyl phthalate  (EXP)
caffeine  (ISO)
clobetasol  (ISO)
clofibric acid  (EXP)
cobalt dichloride  (ISO)
CU-O LINKAGE  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
flutamide  (EXP)
folic acid  (ISO)
folpet  (ISO)
FR900359  (ISO)
furfural  (ISO)
gentamycin  (EXP)
ivermectin  (ISO)
lead(0)  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nitrates  (ISO)
nitric oxide  (ISO)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
paracetamol  (ISO)
rotenone  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
SB 431542  (ISO)
senecionine  (ISO)
serpentine asbestos  (ISO)
sevoflurane  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
T-2 toxin  (EXP)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. The scanning mechanism of eukaryotic translation initiation. Hinnebusch AG Annu Rev Biochem. 2014;83:779-812. doi: 10.1146/annurev-biochem-060713-035802. Epub 2014 Jan 29.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:12426392   PMID:17322308   PMID:17581632   PMID:18599441   PMID:21347434   PMID:22658674   PMID:22681889   PMID:25849773   PMID:27462815  


Genomics

Comparative Map Data
Eif3g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8827,705,914 - 27,709,946 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl827,705,915 - 27,709,987 (-)EnsemblGRCr8
mRatBN7.2819,429,728 - 19,433,760 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl819,429,643 - 19,433,808 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx823,449,092 - 23,453,123 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0821,746,939 - 21,750,970 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0819,659,410 - 19,663,443 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0821,911,632 - 21,915,664 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl821,911,625 - 21,915,716 (-)Ensemblrn6Rnor6.0
Rnor_5.0821,967,947 - 21,971,979 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4819,915,632 - 19,920,117 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera820,824,729 - 20,828,761 (-)NCBICelera
RGSC_v3.1819,915,632 - 19,920,117 (-)NCBI
Cytogenetic Map8q13NCBI
EIF3G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381910,115,014 - 10,119,899 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1910,115,010 - 10,119,951 (-)Ensemblhg38GRCh38
GRCh371910,225,690 - 10,230,575 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361910,086,690 - 10,091,599 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341910,086,690 - 10,091,585NCBI
Celera1910,121,181 - 10,126,038 (-)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef199,806,336 - 9,811,241 (-)NCBIHuRef
CHM1_11910,225,972 - 10,230,857 (-)NCBICHM1_1
T2T-CHM13v2.01910,241,223 - 10,246,106 (-)NCBIT2T-CHM13v2.0
Eif3g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39920,805,645 - 20,809,886 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl920,805,645 - 20,809,919 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38920,894,349 - 20,898,590 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl920,894,349 - 20,898,623 (-)Ensemblmm10GRCm38
MGSCv37920,698,793 - 20,703,034 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36920,644,751 - 20,648,992 (-)NCBIMGSCv36mm8
Celera918,163,047 - 18,167,288 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.66NCBI
Eif3g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554951,451,454 - 1,457,216 (-)Ensembl
ChiLan1.0NW_0049554951,452,806 - 1,456,834 (-)NCBIChiLan1.0ChiLan1.0
EIF3G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22015,030,048 - 15,035,003 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11914,030,358 - 14,035,308 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0199,663,525 - 9,668,475 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11910,324,063 - 10,328,960 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1910,324,063 - 10,328,960 (-)EnsemblpanPan2panpan1.1
EIF3G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12050,941,413 - 50,946,042 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2050,941,503 - 50,946,041 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2050,810,980 - 50,815,575 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02051,463,242 - 51,467,835 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2051,463,297 - 51,467,829 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12050,670,901 - 50,675,493 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02051,098,150 - 51,102,741 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02051,339,040 - 51,343,631 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Eif3g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118209,843,936 - 209,848,244 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936659506,359 - 510,776 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936659506,460 - 510,752 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF3G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl268,966,222 - 68,970,614 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1268,966,221 - 68,970,648 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2269,294,401 - 69,298,556 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EIF3G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.169,183,740 - 9,188,896 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl69,183,835 - 9,188,870 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366607410,872,836 - 10,877,556 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif3g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248282,308,178 - 2,312,247 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248282,308,086 - 2,311,986 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Eif3g
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1817,157,420 - 17,161,522 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Eif3g
30 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:55
Count of miRNA genes:49
Interacting mature miRNAs:50
Transcripts:ENSRNOT00000027985
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357398Slep3Serum leptin concentration QTL 33.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)81799410550763951Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)81699464261994642Rat
12880044Am9Aortic mass QTL 90.007aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)81038254055382540Rat
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)81296416557964165Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)81595227960952279Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)81296416557964165Rat
1598824Memor4Memory QTL 42.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)81799386262252873Rat
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)81038254055382540Rat
9590084Insglur5Insulin/glucose ratio QTL 518.540.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)8132882639Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)81038254055382540Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)81699464261994642Rat
2317048Ginf1Gastrointestinal inflammation QTL 13.520.005cecum mucosa thickness (VT:0010234)enterocolitis severity score (CMO:0002138)81296416557964165Rat
2302367Slep5Serum leptin concentration QTL 53.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)81799410550763951Rat
12880025Cm102Cardiac mass QTL 1020.044heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)81038254055382540Rat

Markers in Region
RH141339  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8827,705,966 - 27,706,446 (+)Marker Load Pipeline
mRatBN7.2819,429,780 - 19,430,260 (+)MAPPERmRatBN7.2
Rnor_6.0821,911,685 - 21,912,164NCBIRnor6.0
Rnor_5.0821,968,000 - 21,968,479UniSTSRnor5.0
RGSC_v3.4819,915,685 - 19,916,566UniSTSRGSC3.4
Celera820,824,782 - 20,825,261UniSTS
Cytogenetic Map8q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001013095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC135310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ235264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000027985   ⟹   ENSRNOP00000027986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl827,705,915 - 27,709,987 (-)Ensembl
mRatBN7.2 Ensembl819,429,728 - 19,433,789 (-)Ensembl
Rnor_6.0 Ensembl821,911,625 - 21,915,716 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000095125   ⟹   ENSRNOP00000088904
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl827,706,195 - 27,709,987 (-)Ensembl
mRatBN7.2 Ensembl819,429,728 - 19,433,807 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101320   ⟹   ENSRNOP00000090835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl827,706,195 - 27,709,987 (-)Ensembl
mRatBN7.2 Ensembl819,429,643 - 19,433,808 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000118769   ⟹   ENSRNOP00000087437
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl827,706,195 - 27,709,987 (-)Ensembl
mRatBN7.2 Ensembl819,429,730 - 19,433,793 (-)Ensembl
RefSeq Acc Id: NM_001013095   ⟹   NP_001013113
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8827,705,914 - 27,709,946 (-)NCBI
mRatBN7.2819,429,728 - 19,433,760 (-)NCBI
Rnor_6.0821,911,632 - 21,915,664 (-)NCBI
Rnor_5.0821,967,947 - 21,971,979 (-)NCBI
RGSC_v3.4819,915,632 - 19,920,117 (-)RGD
Celera820,824,729 - 20,828,761 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001013113 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH86383 (Get FASTA)   NCBI Sequence Viewer  
  EDL78343 (Get FASTA)   NCBI Sequence Viewer  
  EDL78344 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000027986
GenBank Protein Q5RK09 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001013113   ⟸   NM_001013095
- UniProtKB: Q5RK09 (UniProtKB/Swiss-Prot),   A0A8I6ADE1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000027986   ⟸   ENSRNOT00000027985
Ensembl Acc Id: ENSRNOP00000090835   ⟸   ENSRNOT00000101320
Ensembl Acc Id: ENSRNOP00000088904   ⟸   ENSRNOT00000095125
Ensembl Acc Id: ENSRNOP00000087437   ⟸   ENSRNOT00000118769
Protein Domains
RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5RK09-F1-model_v2 AlphaFold Q5RK09 1-320 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695767
Promoter ID:EPDNEW_R6292
Type:multiple initiation site
Name:Eif3g_1
Description:eukaryotic translation initiation factor 3, subunit G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0821,915,690 - 21,915,750EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307191 AgrOrtholog
BioCyc Gene G2FUF-31450 BioCyc
Ensembl Genes ENSRNOG00000020619 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000027985 ENTREZGENE
Gene3D-CATH 3.30.70.330 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7301572 IMAGE-MGC_LOAD
InterPro eIF3_g UniProtKB/Swiss-Prot
  eIF3g_N UniProtKB/Swiss-Prot
  eIF3G_RRM UniProtKB/Swiss-Prot
  Nucleotide-bd_a/b_plait_sf UniProtKB/Swiss-Prot
  RBD_domain_sf UniProtKB/Swiss-Prot
  RRM_dom UniProtKB/Swiss-Prot
KEGG Report rno:298700 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105936 IMAGE-MGC_LOAD
NCBI Gene 298700 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G UniProtKB/Swiss-Prot
Pfam eIF3g UniProtKB/Swiss-Prot
  RRM_1 UniProtKB/Swiss-Prot
PhenoGen Eif3g PhenoGen
PIRSF Transl_init_eIF-3_RNA-bind UniProtKB/Swiss-Prot
PROSITE RRM UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000020619 RatGTEx
SMART RRM UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54928 UniProtKB/Swiss-Prot
UniProt A0A8I6A465_RAT UniProtKB/TrEMBL
  A0A8I6A906_RAT UniProtKB/TrEMBL
  A0A8I6ADE1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2QF28_RAT UniProtKB/TrEMBL
  EIF3G_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-04 Eif3g  eukaryotic translation initiation factor 3, subunit G  Eif3s4  eukaryotic translation initiation factor 3, subunit 4 (delta)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Eif3s4  eukaryotic translation initiation factor 3, subunit 4 (delta)  Eif3s4_predicted  eukaryotic translation initiation factor 3, subunit 4 (delta) (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Eif3s4_predicted  eukaryotic translation initiation factor 3, subunit 4 (delta) (predicted)      Symbol and Name status set to approved 70820 APPROVED