C2cd5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 177,700,515 - 177,790,576 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 175,969,544 - 176,055,597 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 175,969,545 - 176,055,558 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 182,264,524 - 182,350,615 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 178,048,794 - 178,134,888 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 176,669,376 - 176,755,467 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 177,245,868 - 177,331,910 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 177,245,868 - 177,331,915 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 241,450,858 - 241,536,434 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 180,903,353 - 180,989,193 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 181,149,267 - 181,234,270 (-) | NCBI | | | | | Celera | 4 | 164,500,350 - 164,586,357 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q44 | NCBI | | | | |
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C2CD5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 22,448,583 - 22,544,542 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 22,448,583 - 22,544,546 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 22,601,517 - 22,697,476 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 22,492,784 - 22,588,719 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 22,492,786 - 22,588,719 | NCBI | | | | | Celera | 12 | 27,749,342 - 27,845,274 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12.1 | NCBI | | | | | HuRef | 12 | 22,367,856 - 22,463,789 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 22,566,581 - 22,662,495 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 22,320,046 - 22,416,003 (-) | NCBI | | T2T-CHM13v2.0 | | |
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C2cd5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 142,956,646 - 143,045,878 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 142,956,646 - 143,045,867 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 143,010,920 - 143,100,155 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 143,010,920 - 143,100,141 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 142,959,440 - 143,048,627 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 142,968,151 - 143,069,912 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 146,066,244 - 146,155,543 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | G3 | NCBI | | | | | cM Map | 6 | 75.13 | NCBI | | | | |
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C2cd5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955413 | 17,884,556 - 17,972,851 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 17,883,411 - 17,972,865 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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C2CD5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 74,271,825 - 74,369,730 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 74,268,239 - 74,366,135 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 63,769,552 - 63,865,681 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 66,377,634 - 66,472,883 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 66,377,634 - 66,472,877 (+) | Ensembl | panpan1.1 | | panPan2 | |
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C2CD5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 24,697,036 - 24,798,138 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 24,697,016 - 24,797,543 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 21,564,193 - 21,665,404 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 24,907,508 - 25,008,844 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 24,907,536 - 25,008,968 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 24,712,280 - 24,813,433 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 24,736,875 - 24,838,054 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 21,733,960 - 21,835,265 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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C2cd5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 86,554,495 - 86,649,759 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936548 | 4,477,313 - 4,572,670 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936548 | 4,477,336 - 4,572,645 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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C2CD5 (Sus scrofa - pig) |
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C2CD5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 22,267,508 - 22,362,927 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 22,267,415 - 22,362,969 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666069 | 12,781,268 - 12,876,482 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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C2cd5 (Heterocephalus glaber - naked mole-rat) |
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