rs6063046 Rat Genome Database

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Variant: rs6063046 -  Homo sapiens

RGD ID: 406216532
RS ID: rs6063046
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: EYA2  
Reference Nucleotide: A
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh38 20 46,967,739
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
rs6063046Humanblood triglyceride level  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:36376304

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
rs6063046Humantriglyceride measurement  IAGP 405850206 GWAS_CATALOGPMID:36376304
rs6063046Humantype 2 diabetes mellitus  IAGP 405850206 GWAS_CATALOGPMID:35551307
Data has come from the GWAS Catalog   
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1639517_H GCST90492734 Type 2 diabetes 50,251 African American cases, 103,909 African American controls, 88,109 East Asian ancestry cases, 339,395 East Asian ancestry controls, 242,283 European ancestry cases, 1,569,734 European ancestry controls, 29,375 Hispanic cases, 59,368 Hispanic controls, 1,602 South African ancestry cases, 976 South African ancestry controls, 16,832 South Asian ancestry cases, 33,767 South Asian ancestry controls A 0.79919 5E-24 23.302 rs6063046 N/A PMID:38374256
GWAS1243187_H GCST90179149 Triglyceride levels (MTAG) 361,194 European ancestry individuals A NR 1E-11 11 rs6063046 0.018569 triglyceride measurement (EFO:0004530)
 PMID:36376304
GWAS1366142_H GCST90132183 Type 2 diabetes 251,740 European ancestry individuals, 139,705 East Asian ancestry individuals, 40,737 South Asian ancestry individuals, 27,417 Hispanic individuals, 30,167 African American individuals, 2,426 Zulu ancestry individuals A NR 8E-11 10.097 rs6063046 1.04 PMID:35551307
GWAS1366329_H GCST90132184 Type 2 diabetes 251,740 European ancestry individuals A 0.727 7E-10 9.155 rs6063046 0.045 PMID:35551307

Gene Symbol:EYA2
Accession:XM_047440010
Location:5UTRS;INTRON

Gene Symbol:EYA2
Accession:NM_172110
Location:5UTRS;INTRON

Gene Symbol:EYA2
Accession:XM_005260327
Location:5UTRS;INTRON

Gene Symbol:EYA2
Accession:NM_005244
Location:5UTRS;INTRON

Gene Symbol:EYA2
Accession:XM_017027721
Location:5UTRS;INTRON

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Database
Acc Id
Source(s)
GWAS Catalog GCST90132183 GWAS Catalog
  GCST90132184 GWAS Catalog
  GCST90179149 GWAS Catalog