Scort14 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Scort14 (Serum corticosterone level QTL 14) Rattus norvegicus

Symbol: Scort14
Name: Serum corticosterone level QTL 14
RGD ID: 9590272
Previously known as: basal level Plasma Cort; basal level plasma corticosterone in response to restraint stress
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 2.78
P Value: 0.001
Variance: 9.2
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01516,980,907 - 61,980,907RGD_MAPPER_PIPELINERnor6.0
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Quantitative Trait Loci Influencing Abdominal Fat Deposition and Functional Variability of the HPA Axis in the Rat. Marissal-Arvy N, etal., Horm Metab Res. 2014 Jul 8.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D15Rat52)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01539,480,797 - 39,481,017NCBI
Celera1532,875,574 - 32,875,793UniSTS
RH 3.4 Map15216.2UniSTS
RH 3.4 Map15216.2RGD
RH 2.0 Map15188.4RGD
SHRSP x BN Map1527.8499RGD
FHH x ACI Map1529.96RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general confidence interval 12.3-82.1 Mb 8694157
qtl_general number of animals used: 93 F2 males and 94 F2 females  
qtl_general software package used: MultiQTL software 8694157
qtl_general measurement method: animals were exposed to restraint stress in a plastic bag for 20 min at the peak of the response blood samples were collected on EDTA, centrifuged at 4000g for 10 min to extract the plasma, plasma corticosterone was measured with an in-house RIA kit using an anti-Cort antibody 8694157