Scort23 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Scort23 (Serum corticosterone level QTL 23) Rattus norvegicus

Symbol: Scort23
Name: Serum corticosterone level QTL 23
RGD ID: 10053700
Previously known as: Ln basal corticosterone 1
Trait: blood corticosterone amount   (VT:0005345)    
Measurement Type: plasma corticosterone level   (CMO:0001173)    
LOD Score: 2.69
P Value: 0.0024
Variance: 9.4
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.4118,725,123 - 63,725,123RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: ISIAH WAG/Nov 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
ISIAH  (IEA)
WAG/Nov  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic control of the corticosterone level at rest and under emotional stress in ISIAH rats with inherited stress-induced arterial hypertension. Redina OE, etal., Clin Exp Hypertens. 2010;32(6):364-71. doi: 10.3109/10641961003628502.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D1Rat234)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.4141,225,048 - 41,225,199UniSTS
RGSC_v3.4141,225,047 - 41,225,199RGD
RGSC_v3.1141,227,993 - 41,228,144RGD
Celera142,702,392 - 42,702,542UniSTS
RH 3.4 Map1536.4UniSTS
RH 3.4 Map1536.4RGD
RH 2.0 Map1271.1RGD
SHRSP x BN Map122.7299RGD
FHH x ACI Map127.8699RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 126 F2 males 10053640
qtl_general software package used: ANOVA, MAPMAKER/EXP 3.0, MAPMAKER/QTL 1.1 10053640
qtl_general measurement method: animals were maintained under normal conditions, blood was collected and basal corticosterone level determined 10053640
qtl_general confidence interval: 27-51 Mb 10053640