UniSTS:486248 Marker Search Result - Rat Genome Database

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Marker: UniSTS:486248

Symbol: UniSTS:486248
Previously known as:
RGD ID: 5505620
Expected Size: 1376 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2112,504,998 - 2,506,374 (+)MAPPERmRatBN7.2
Rnor_6.0111,835,478 - 1,836,853NCBIRnor6.0
Rnor_5.0111,816,054 - 1,817,429UniSTSRnor5.0
RGSC_v3.4112,122,125 - 2,123,500UniSTSRGSC3.4
Celera112,486,541 - 2,487,916UniSTS
Cytogenetic Map11p12UniSTS
Is Marker For: Genes:   Zfp654  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGCCCAGGCTCATCAGAAAA
Reverse Primer TTGGTTTGGAAGGTGCCTGA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1308321Zfp654zinc finger protein 6541125008922565552Rat

Nucleotide Sequences
RefSeq Transcripts XM_237855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)11121836709Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 288354 UniSTS