AA850405 Marker Search Result - Rat Genome Database

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Marker: AA850405

Symbol: AA850405
Previously known as:
RGD ID: 5084446
Expected Size: 209 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr87130,972,924 - 130,973,133 (+)Marker Load Pipeline
mRatBN7.27129,093,847 - 129,094,056 (+)MAPPERmRatBN7.2
Rnor_6.07139,450,310 - 139,450,518NCBIRnor6.0
Rnor_5.07139,642,062 - 139,642,270UniSTSRnor5.0
RGSC_v3.47136,674,287 - 136,674,495UniSTSRGSC3.4
Celera7125,584,817 - 125,585,025UniSTS
RH 3.4 Map71089.4UniSTS
Cytogenetic Map7q36UniSTS
Is Marker For: Genes:   Tmem106c  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CAAGCCCTTCAGTAGACCCTTG
Reverse Primer CAAACTTGGTGTGAGAAGCACC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1311532Tmem106ctransmembrane protein 106C7129088468129094128Rat
RefSeq Transcripts NM_001008358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC086606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7119513385135012528Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat

1 to 10 of 20 rows


Database
Acc Id
Source(s)
NCBI Gene 315286 UniSTS