RH130672 Marker Search Result - Rat Genome Database
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Summary
References - curated
Strains and Sequence
Sequence
Region
Genes in Region
Nucleotide Sequences
QTLs in Region (GRCr8)
General
Marker: RH130672
Symbol:
RH130672
Previously known as:
AI043896;
RGD ID:
5044558
Expected Size:
201 (bp)
Position
Rat Assembly
Chr
Position (strand)
Source
JBrowse
mRatBN7.2
5
9,345,981 - 9,346,182 (+)
MAPPER
mRatBN7.2
Rnor_6.0
5
9,047,110 - 9,047,310
NCBI
Rnor6.0
Rnor_5.0
5
13,848,127 - 13,848,327
UniSTS
Rnor5.0
RH 3.4 Map
5
54.7
UniSTS
Annotation
References - curated
1 to 1 of 1 rows
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#
Reference Title
Reference Citation
1.
UniSTS Pipeline
RGD automated pipelines
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Strains and Sequence
Sequence
Forward Primer
AATGACAGAAGTAGCCTGGATCG
Reverse Primer
TTCCTTGGATGTGTTACCTTGG
Region
Genes in Region
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The following
Genes
overlap with this region.
Full Report
CSV
TAB
Printer
Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
620242
Sgk3
serum/glucocorticoid regulated kinase family, member 3
5
9345761
9472243
Rat
1 to 1 of 1 rows
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Nucleotide Sequences
3
5
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3
5
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QTLs in Region (GRCr8)
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The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293666
Bmd38
Bone mineral density QTL 38
4.4
femur size trait (VT:1000369)
femoral neck cortical cross-sectional area (CMO:0001702)
5
8948228
53948228
Rat
2312562
Pur18
Proteinuria QTL 18
2.6
0.001
urine total protein amount (VT:0000032)
urine total protein excretion rate (CMO:0000756)
5
2138965
32656739
Rat
1576314
Eutr1
Estrogen induced uterine response QTL 1
uterus integrity trait (VT:0010575)
pyometritis severity score (CMO:0002009)
5
2138965
166875058
Rat
8662454
Vetf3
Vascular elastic tissue fragility QTL 3
27.4
artery integrity trait (VT:0010639)
number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)
5
2282226
69540447
Rat
70212
Niddm25
Non-insulin dependent diabetes mellitus QTL 25
3.54
blood glucose amount (VT:0000188)
blood glucose level (CMO:0000046)
5
1
131345958
Rat
1300117
Hrtrt8
Heart rate QTL 8
3.49
heart pumping trait (VT:2000009)
heart rate (CMO:0000002)
5
3844018
47869213
Rat
61462
Niddm10
Non-insulin dependent diabetes mellitus QTL 10
3.9
0.001
blood glucose amount (VT:0000188)
plasma glucose level (CMO:0000042)
5
5112159
47171491
Rat
1331756
Rf34
Renal function QTL 34
4.16275
kidney blood vessel physiology trait (VT:0100012)
absolute change in renal blood flow rate (CMO:0001168)
5
1
90450412
Rat
631827
Alc4
Alcohol consumption QTL 4
3.5
consumption behavior trait (VT:0002069)
ethanol drink intake rate (CMO:0001407)
5
8187501
18616199
Rat
2313085
Bss59
Bone structure and strength QTL 59
2.9
0.0001
long bone metaphysis morphology trait (VT:0000133)
tibia midshaft total cross-sectional area (CMO:0001715)
5
3844018
26141981
Rat
1331771
Rf35
Renal function QTL 35
4.36965
kidney blood vessel physiology trait (VT:0100012)
absolute change in renal blood flow rate (CMO:0001168)
5
729470
86724018
Rat
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Additional Information