D7Got130 Marker Search Result - Rat Genome Database

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Marker: D7Got130

Symbol: D7Got130
Previously known as: oxsts2396; OT62.44; 
RGD ID: 44323
Expected Size: 214 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27121,665,245 - 121,665,459 (+)MAPPERmRatBN7.2
Rnor_6.07131,673,326 - 131,673,638NCBIRnor6.0
Rnor_5.07131,348,682 - 131,348,994UniSTSRnor5.0
RGSC_v3.47128,935,281 - 128,935,494RGDRGSC3.4
RGSC_v3.47128,935,281 - 128,935,494UniSTSRGSC3.4
RGSC_v3.17128,969,511 - 128,969,724RGD
Celera7118,119,238 - 118,119,442UniSTS
RH 3.4 Map7963.7RGD
RH 3.4 Map7963.7UniSTS
RH 2.0 Map7714.9RGD
Cytogenetic Map7q35UniSTS
Is Marker For: Genes:   Cpne8   LOC100359500  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer CGATCCAAGTTCCCAGCA
Reverse Primer CGATCTGAGATACAAGGTGTCTTT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1307939Cpne8copine 87121615293121789507Rat
GenBank Nucleotide AU025281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 26 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7119513385135012528Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
1357339Stl14Serum triglyceride level QTL 143.450.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7112729683133492707Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat

1 to 10 of 26 rows


Database
Acc Id
Source(s)
NCBI Gene 100359500 UniSTS
  362988 UniSTS