D3Got75 Marker Search Result - Rat Genome Database

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Marker: D3Got75

Symbol: D3Got75
Previously known as: oxsts1954; OT76.18; 
RGD ID: 43678
Expected Size: 145 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83127,505,878 - 127,506,023 (+)Marker Load Pipeline
mRatBN7.23107,052,096 - 107,052,241 (+)MAPPERmRatBN7.2
Rnor_6.03111,871,759 - 111,871,903NCBIRnor6.0
Rnor_5.03118,419,526 - 118,419,670UniSTSRnor5.0
RGSC_v3.43106,588,836 - 106,588,981RGDRGSC3.4
RGSC_v3.43106,588,837 - 106,588,981UniSTSRGSC3.4
RGSC_v3.13106,485,265 - 106,485,409RGD
Celera3105,960,990 - 105,961,134UniSTS
RH 3.4 Map3927.6RGD
RH 3.4 Map3927.6UniSTS
RH 2.0 Map3604.6RGD
Cytogenetic Map3q35UniSTS
Is Marker For: Genes:   Sptbn5  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer ATCCCCTTGAGATGCAGCA
Reverse Primer AAAGATGGTGCAGAAAATGAGAGT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1311047Sptbn5spectrin, beta, non-erythrocytic 53107013783107054878Rat
GenBank Nucleotide AU027661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 40 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)370653097121056321Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)353184593115665732Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
1582216Bw65Body weight QTL 656.3body mass (VT:0001259)body weight (CMO:0000012)3102200529115665732Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat

1 to 10 of 40 rows


Database
Acc Id
Source(s)
NCBI Gene 296090 UniSTS