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Gene: Sptbn5 (spectrin, beta, non-erythrocytic 5) Rattus norvegicus
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Symbol: Sptbn5
Name: spectrin, beta, non-erythrocytic 5
Description: Predicted to have several functions, including cytoskeletal protein binding activity; dynein intermediate chain binding activity; and opsin binding activity. Predicted to be involved in Golgi organization and lysosomal transport. Predicted to localize to the apical cortex; cytoskeleton; and photoreceptor cell cilium. Orthologous to human SPTBN5 (spectrin beta, non-erythrocytic 5); INTERACTS WITH 2,6-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC296090; LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5; spectrin beta chain, brain 4; spectrin beta chain, non-erythrocytic 5
Orthologs:
Homo sapiens (human) : SPTBN5 (spectrin beta, non-erythrocytic 5)  HGNC  Alliance
Mus musculus (house mouse) : Sptbn5 (spectrin beta, non-erythrocytic 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sptbn5 (spectrin beta, non-erythrocytic 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SPTBN5 (spectrin beta, non-erythrocytic 5)
Canis lupus familiaris (dog) : SPTBN5 (spectrin beta, non-erythrocytic 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sptbn5 (spectrin beta, non-erythrocytic 5)
Sus scrofa (pig) : SPTBN5 (spectrin beta, non-erythrocytic 5)
Chlorocebus sabaeus (green monkey) : SPTBN5 (spectrin beta, non-erythrocytic 5)
Heterocephalus glaber (naked mole-rat) : Sptbn5 (spectrin beta, non-erythrocytic 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03111,833,411 - 111,875,551 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03118,382,048 - 118,422,616 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43106,548,449 - 106,591,064 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13106,445,029 - 106,490,705 (-)NCBI
Celera3105,923,233 - 105,964,782 (-)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sptbn5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311047
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.