D10Rat185 Marker Search Result - Rat Genome Database

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Marker: D10Rat185

Symbol: D10Rat185
Previously known as: oxsts8706; R0226-A07; 
RGD ID: 41376
Expected Size: 126 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21012,302,835 - 12,302,958 (+)MAPPERmRatBN7.2
Rnor_6.01012,642,114 - 12,642,236NCBIRnor6.0
Rnor_5.01012,466,048 - 12,466,170UniSTSRnor5.0
RGSC_v3.41012,518,948 - 12,519,071RGDRGSC3.4
RGSC_v3.41012,518,949 - 12,519,071UniSTSRGSC3.4
RGSC_v3.11012,518,662 - 12,519,150RGD
Celera1012,027,398 - 12,027,520UniSTS
SHRSP x BN Map105.71RGD
SHRSP x BN Map105.71UniSTS
Is Marker For: Strains:   AVN/Orl   BP/Cub   OKA/Wsl   SHR/OlaHsd   SHRSP/Riv   GK/KyoSwe   COP/OlaHsd  


Annotation


#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TCCTCTGACTTTCACCTCACAA
Reverse Primer TCTCTCTATGTGTCTGTGTGCATG
 
Template 
TGCATGCCTGCAGGTCGACTCTAGAGGATCCCCCCAACTACGGCTACAGAGTGTGACCTTGTTT
CTAATATATACATTCAGAACTATTTTTAATCTCAATTTATGTTGTCTGTCTCTCTATGTGTCTG
TGTGCATGCACATGTGTTTCTGCGCACGCATNANTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTACCTTGCATGTCAGGTATTGTGAGGTGAAAGTCAGAGGACNGTTTCATGAGTGAGTT
ATCTCCTTTCAACTGTGTGGGTCCCAGGAACCCAACTCACATATTCTATCTTTGTGGCAAGTGC
CTTTATCTCCTGAGCCACCTCTTCTGCCCCTAAGTGATAGCCCTGTTTGGGAGATAAGTGTTAC
ATGTGAATTTGCATATTGAGATTGCCTAAGGATCTATTACCTAAGGATCAATCTTGTTGAAAAA
CTGACTCTTTCCTGTACATCGTATTCCCATATGCTNNCCCTACATGCTGAGAACCAGGAGAAGA
GGCAGTCACTG
Strain, Expected Size(s)

AVN/Orl 118 BP/Cub 118 COP/OlaHsd 118
GK/KyoSwe 118 OKA/Wsl 118 SHR/OlaHsd 118
SHRSP/Riv 118


GenBank Nucleotide JH616936.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10129497586Rat

1 to 10 of 25 rows