Dhrs7 (dehydrogenase/reductase 7) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Dhrs7 (dehydrogenase/reductase 7) Rattus norvegicus
Analyze
Symbol: Dhrs7
Name: dehydrogenase/reductase 7
RGD ID: 1565002
Description: Predicted to enable all-trans-retinol dehydrogenase (NADP+) activity and carbonyl reductase (NADPH) activity. Predicted to be involved in retinol metabolic process. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human DHRS7 (dehydrogenase/reductase 7); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dehydrogenase/reductase (SDR family) member 7; dehydrogenase/reductase SDR family member 7; LOC299135; RGD1565002; similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4); uncharacterized protein LOC299135
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8697,068,149 - 97,083,744 (-)NCBIGRCr8
mRatBN7.2691,332,259 - 91,347,856 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl691,251,323 - 91,347,892 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx691,702,321 - 91,717,879 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0692,001,790 - 92,017,354 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0691,429,732 - 91,445,294 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0695,522,577 - 95,541,393 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl695,522,577 - 95,541,393 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06104,960,365 - 104,979,222 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4695,049,769 - 95,065,288 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera689,793,235 - 89,808,720 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1,2-naphthoquinone  (ISO)
1,4-benzoquinone  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-nitrobenzaldehyde  (ISO)
6-propyl-2-thiouracil  (EXP)
9,10-phenanthroquinone  (ISO)
aflatoxin B1  (ISO)
amphotericin B  (ISO)
androst-4-ene-3,17-dione  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
beauvericin  (ISO)
benzil  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
buspirone  (EXP)
cadmium dichloride  (EXP)
cantharidin  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
copper(II) sulfate  (ISO)
cortisone  (ISO)
coumestrol  (ISO)
cyclosporin A  (EXP,ISO)
decabromodiphenyl ether  (EXP)
deguelin  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
enniatin  (ISO)
epoxiconazole  (ISO)
estrone  (ISO)
finasteride  (EXP)
flutamide  (EXP)
folic acid  (ISO)
furan  (EXP)
gentamycin  (EXP)
indole-3-methanol  (EXP)
indometacin  (ISO)
inulin  (ISO)
isatin  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
metyrapone  (ISO)
N-nitrosodiethylamine  (EXP)
N-nitrosodimethylamine  (EXP)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
nimesulide  (EXP)
ochratoxin A  (EXP)
oxcarbazepine  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP,ISO)
rotenone  (EXP,ISO)
SB 431542  (ISO)
sodium dichromate  (EXP)
streptozocin  (EXP)
temozolomide  (ISO)
thioacetamide  (EXP)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19946888  


Genomics

Comparative Map Data
Dhrs7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8697,068,149 - 97,083,744 (-)NCBIGRCr8
mRatBN7.2691,332,259 - 91,347,856 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl691,251,323 - 91,347,892 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx691,702,321 - 91,717,879 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0692,001,790 - 92,017,354 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0691,429,732 - 91,445,294 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0695,522,577 - 95,541,393 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl695,522,577 - 95,541,393 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06104,960,365 - 104,979,222 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4695,049,769 - 95,065,288 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera689,793,235 - 89,808,720 (-)NCBICelera
Cytogenetic Map6q24NCBI
DHRS7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381460,144,119 - 60,169,889 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1460,144,119 - 60,169,856 (-)EnsemblGRCh38hg38GRCh38
GRCh371460,610,837 - 60,636,607 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361459,681,252 - 59,701,857 (-)NCBINCBI36Build 36hg18NCBI36
Build 341459,681,251 - 59,701,857NCBI
Celera1440,661,330 - 40,682,046 (-)NCBICelera
Cytogenetic Map14q23.1NCBI
HuRef1440,775,646 - 40,796,362 (-)NCBIHuRef
CHM1_11460,550,762 - 60,571,492 (-)NCBICHM1_1
T2T-CHM13v2.01454,350,401 - 54,376,186 (-)NCBIT2T-CHM13v2.0
Dhrs7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391272,697,127 - 72,711,678 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1272,697,127 - 72,711,683 (-)EnsemblGRCm39 Ensembl
GRCm381272,650,353 - 72,664,828 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1272,650,353 - 72,664,909 (-)EnsemblGRCm38mm10GRCm38
MGSCv371273,751,340 - 73,765,815 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361273,569,194 - 73,583,620 (-)NCBIMGSCv36mm8
Celera1273,765,970 - 73,781,060 (-)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1230.23NCBI
DHRS7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21561,280,412 - 61,301,179 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11460,496,926 - 60,517,636 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01440,750,407 - 40,771,106 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11459,014,176 - 59,034,877 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1459,014,182 - 59,034,877 (-)Ensemblpanpan1.1panPan2
DHRS7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1835,251,988 - 35,269,880 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl835,251,975 - 35,269,869 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha835,005,894 - 35,023,773 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0835,484,966 - 35,502,849 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl835,484,959 - 35,517,165 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1835,097,280 - 35,115,157 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0835,174,178 - 35,192,051 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0835,534,164 - 35,552,049 (-)NCBIUU_Cfam_GSD_1.0
LOC101966596
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864069,833,360 - 69,850,438 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364954,339,700 - 4,358,547 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364954,341,261 - 4,358,279 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DHRS7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1189,151,131 - 189,170,534 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11189,153,579 - 189,170,745 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21210,275,976 - 210,293,200 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DHRS7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12437,368,792 - 37,389,433 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2437,368,982 - 37,389,403 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605325,613,416 - 25,634,468 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dhrs7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473440,993,587 - 41,006,074 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473440,994,786 - 41,006,001 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dhrs7
26 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:202
Count of miRNA genes:152
Interacting mature miRNAs:171
Transcripts:ENSRNOT00000007645, ENSRNOT00000034289
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat

Markers in Region
D6Rat17  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.4695,059,986 - 95,060,168UniSTSRGSC3.4
RGSC_v3.4695,059,985 - 95,060,168RGDRGSC3.4
RGSC_v3.1695,063,442 - 95,063,624RGD
RH 3.4 Map6656.3RGD
RH 3.4 Map6656.3UniSTS
RH 2.0 Map6867.5RGD
SHRSP x BN Map655.6199RGD
Cytogenetic Map6q24UniSTS
RH142558  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2691,161,917 - 91,162,018 (+)MAPPERmRatBN7.2
mRatBN7.2691,258,530 - 91,258,631 (+)MAPPERmRatBN7.2
Rnor_6.0695,449,264 - 95,449,364NCBIRnor6.0
Rnor_5.06104,887,052 - 104,887,152UniSTSRnor5.0
RGSC_v3.4694,975,005 - 94,975,105UniSTSRGSC3.4
RGSC_v3.4694,876,878 - 94,876,978UniSTSRGSC3.4
Celera689,719,568 - 89,719,668UniSTS
Celera689,623,428 - 89,623,528UniSTS
RH 3.4 Map6655.4UniSTS
Cytogenetic Map6q24UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 26 41 11 8
Low 9
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000007645   ⟹   ENSRNOP00000007645
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl691,332,262 - 91,347,892 (-)Ensembl
Rnor_6.0 Ensembl695,522,577 - 95,541,393 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000109573   ⟹   ENSRNOP00000079632
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl691,251,323 - 91,347,824 (-)Ensembl
RefSeq Acc Id: NM_001271394   ⟹   NP_001258323
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8697,068,149 - 97,083,744 (-)NCBI
mRatBN7.2691,332,259 - 91,347,856 (-)NCBI
Rnor_6.0695,522,577 - 95,541,393 (-)NCBI
Rnor_5.06104,960,365 - 104,979,222 (-)NCBI
Celera689,793,235 - 89,808,720 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001258323 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM03597 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000007645
  ENSRNOP00000007645.7
  ENSRNOP00000079632.1
Reference Protein Sequences
RefSeq Acc Id: NP_001258323   ⟸   NM_001271394
- UniProtKB: D4A0T8 (UniProtKB/TrEMBL),   A0A8I5ZN24 (UniProtKB/TrEMBL),   A6HC42 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000007645   ⟸   ENSRNOT00000007645
RefSeq Acc Id: ENSRNOP00000079632   ⟸   ENSRNOT00000109573

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A0T8-F1-model_v2 AlphaFold D4A0T8 1-340 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694658
Promoter ID:EPDNEW_R5183
Type:multiple initiation site
Name:Dhrs7_1
Description:dehydrogenase/reductase 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0695,541,368 - 95,541,428EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565002 AgrOrtholog
BioCyc Gene G2FUF-37140 BioCyc
Ensembl Genes ENSRNOG00000005589 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000007645 ENTREZGENE
  ENSRNOT00000007645.7 UniProtKB/TrEMBL
  ENSRNOT00000109573.1 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro Glc/ribitol_DH UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  Sc_DH/Rdtase_CS UniProtKB/TrEMBL
KEGG Report rno:299135 UniProtKB/TrEMBL
NCBI Gene 299135 ENTREZGENE
PANTHER DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7 UniProtKB/TrEMBL
  DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED UniProtKB/TrEMBL
Pfam adh_short UniProtKB/TrEMBL
PhenoGen Dhrs7 PhenoGen
PRINTS GDHRDH UniProtKB/TrEMBL
  SDRFAMILY UniProtKB/TrEMBL
PROSITE ADH_SHORT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000005589 RatGTEx
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt A0A8I5ZN24 ENTREZGENE, UniProtKB/TrEMBL
  A6HC42 ENTREZGENE, UniProtKB/TrEMBL
  D4A0T8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-01 Dhrs7  dehydrogenase/reductase 7  Dhrs7  dehydrogenase/reductase (SDR family) member 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-11-25 Dhrs7  dehydrogenase/reductase (SDR family) member 7  RGD1565002  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1565002  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4)   RGD1565002_predicted  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-10 RGD1565002_predicted  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4) (predicted)      Name updated 1299863 APPROVED
2006-03-07 RGD1565002_predicted  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4) (predicted)  LOC299135  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4)  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC299135  similar to Dehydrogenase/reductase SDR family member 7 precursor (Retinal short-chain dehydrogenase/reductase 4)      Symbol and Name status set to provisional 70820 PROVISIONAL