Helt (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 16 | 52,723,828 - 52,725,610 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 45,991,227 - 45,993,045 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 45,991,227 - 45,992,960 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 16 | 49,185,560 - 49,187,293 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 49,185,560 - 49,187,293 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 48,897,557 - 48,899,320 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 49,271,310 - 49,273,233 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 16 | 43,990,135 - 43,991,868 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | q11 | NCBI | | | | |
|
HELT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 185,018,490 - 185,020,953 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 185,018,490 - 185,020,953 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 185,939,644 - 185,942,107 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 186,177,077 - 186,178,920 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 183,267,003 - 183,268,846 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q35.1 | NCBI | | | | | HuRef | 4 | 181,693,384 - 181,695,227 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 185,916,557 - 185,918,400 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 188,361,903 - 188,364,366 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Helt (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 8 | 46,745,080 - 46,747,785 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 46,745,076 - 46,747,708 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 46,292,043 - 46,294,748 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 46,292,039 - 46,294,671 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 47,377,401 - 47,380,025 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 47,790,864 - 47,793,488 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 48,973,821 - 48,976,445 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | B1.1 | NCBI | | | | | cM Map | 8 | 26.32 | NCBI | | | | |
|
Helt (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955403 | 23,996,488 - 23,998,290 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955403 | 23,996,488 - 23,998,290 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
HELT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 182,755,377 - 182,757,964 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 183,103,808 - 183,106,395 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 177,183,619 - 177,186,099 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 189,404,960 - 189,406,918 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 189,405,042 - 189,406,886 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
HELT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 16 | 45,564,986 - 45,567,225 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 16 | 45,565,131 - 45,566,884 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 16 | 46,052,470 - 46,054,710 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 47,781,611 - 47,783,852 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 16 | 47,781,595 - 47,783,564 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 16 | 45,748,432 - 45,750,671 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 16 | 46,362,009 - 46,364,254 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 46,494,214 - 46,496,455 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Helt (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404943 | 33,861,934 - 33,864,392 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936554 | 4,245,648 - 4,247,700 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936554 | 4,245,684 - 4,247,832 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
HELT (Sus scrofa - pig) |
|
HELT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 7 | 130,982,298 - 130,988,696 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 130,985,304 - 130,987,148 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 111,243,420 - 111,245,377 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Helt (Heterocephalus glaber - naked mole-rat) |
|