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Gene: Rab33a (RAB33A, member RAS oncogene family) Rattus norvegicus

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Symbol:

Rab33a

Name:

RAB33A, member RAS oncogene family

RGD ID:

1563280

Description:

Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in antigen processing and presentation and autophagosome assembly. Predicted to be active in Golgi apparatus and endosome. Orthologous to human RAB33A (RAB33A, member RAS oncogene family); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC317580; RAB33A, member of RAS oncogene family; ras-related protein Rab-33A; RGD1563280; similar to Ras-related protein Rab-33A (Small GTP-binding protein S10)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RAB33A (RAB33A, member RAS oncogene family)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rab33a (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rab33a (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RAB33A (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RAB33A (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rab33a (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RAB33A (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RAB33A (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rab33a (RAB33A, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PSAP (prosaposin)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	RAB33A (RAB33A, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rab33a (RAB33A, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rab33a (RAB33A, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rab-33	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rab33a	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	132,572,133 - 132,584,255 (+)	NCBI		GRCr8
mRatBN7.2	X	127,694,219 - 127,706,378 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	127,694,964 - 127,706,378 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	129,820,706 - 129,832,102 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	133,391,515 - 133,402,927 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	130,917,865 - 130,929,261 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	135,348,799 - 135,360,204 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	135,348,436 - 135,360,203 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	135,420,269 - 135,431,674 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	134,913,903 - 134,925,308 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	126,643,393 - 126,654,798 (+)	NCBI		Celera
Cytogenetic Map	X	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab33a	Rat	3-hydroxyisobutryl-CoA hydrolase deficiency		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: 3-hydroxyisobutyryl-CoA hydrolase deficiency	ClinVar	PMID:25741868
Rab33a	Rat	Auditory Neuropathy		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Auditory neuropathy	ClinVar
Rab33a	Rat	autistic disorder		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 more ...
Rab33a	Rat	autosomal hemophilia A		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: AUTOSOMAL HEMOPHILIA A	ClinVar	PMID:31690835
Rab33a	Rat	autosomal recessive nonsyndromic deafness 9		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Auditory neuropathy spectrum disorder	ClinVar
Rab33a	Rat	Charcot-Marie-Tooth disease		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Charcot-Marie-Tooth disease	ClinVar	PMID:25741868 more ...
Rab33a	Rat	Charcot-Marie-Tooth disease type X		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Charcot-Marie-Tooth Neuropathy X	ClinVar	PMID:17576681 more ...
Rab33a	Rat	Charcot-Marie-Tooth disease X-linked recessive 4		ISO	RAB33A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15693857 more ...
Rab33a	Rat	combined oxidative phosphorylation deficiency		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Combined oxidative phosphorylation deficiency	ClinVar	PMID:23806086 more ...
Rab33a	Rat	combined oxidative phosphorylation deficiency 6		ISO	RAB33A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:17576681 more ...
Rab33a	Rat	factor VIII deficiency		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Factor 8 deficiency and congenital	ClinVar	PMID:31690835
Rab33a	Rat	genetic disease		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:17576681 more ...
Rab33a	Rat	hypomyelinating leukodystrophy		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hypomyelinating leukodystrophy	ClinVar	PMID:25741868 and PMID:28842795
Rab33a	Rat	intellectual disability		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar	PMID:25741868
Rab33a	Rat	leukodystrophy		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Leukodystrophy	ClinVar	PMID:25741868 and PMID:28842795
Rab33a	Rat	metachromatic leukodystrophy		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Metachromatic leukodystrophy variant	ClinVar	PMID:25741868 and PMID:28842795
Rab33a	Rat	neuropathy		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Peripheral neuropathy	ClinVar
Rab33a	Rat	peripheral nervous system disease		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Peripheral neuropathy	ClinVar
Rab33a	Rat	prostate cancer		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Malignant tumor of prostate	ClinVar	PMID:23265383 and PMID:28492532
Rab33a	Rat	sensorineural hearing loss		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Sensorineural hearing loss disorder	ClinVar	PMID:25590979 more ...
Rab33a	Rat	Sketetal Dysplasia Coarse Facies Mental Retardation		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Spondyloepimetaphyseal dysplasia X-linked with mental deterioration	ClinVar	PMID:10486082 more ...
Rab33a	Rat	syndromic X-linked intellectual disability Lubs type		ISO	RAB33A (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs type	ClinVar	PMID:25741868
Rab33a	Rat	X-linked deafness 5		ISO	RAB33A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16816020 more ...
Rab33a	Rat	X-linked Spondyloepimetaphyseal Dysplasia with Hypomyelinating Leukodystrophy		ISO	RAB33A (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:10486082 more ...

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab33a	Rat	1,2-dimethylhydrazine	decreases expression	ISO	Rab33a (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of RAB33A mRNA	CTD	PMID:22206623
Rab33a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of RAB33A mRNA	CTD	PMID:22298810
Rab33a	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of RAB33A mRNA	CTD	PMID:32109520 and PMID:33387578
Rab33a	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Rab33a (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of RAB33A mRNA	CTD	PMID:21570461 and PMID:26377647
Rab33a	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Tetrachlorodibenzodioxin results in increased expression of RAB33A mRNA	CTD	PMID:21632981
Rab33a	Rat	2,3,7,8-Tetrachlorodibenzofuran	decreases expression	EXP		6480464	2 more ...	CTD	PMID:32109520
Rab33a	Rat	all-trans-retinoic acid	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[Tretinoin co-treated with arsenic trioxide] results in increased expression of RAB33A mRNA	CTD	PMID:15894607
Rab33a	Rat	all-trans-retinoic acid	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Tretinoin results in decreased expression of RAB33A mRNA	CTD	PMID:23724009
Rab33a	Rat	arsenous acid	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[Tretinoin co-treated with Arsenic Trioxide] results in increased expression of RAB33A mRNA	CTD	PMID:15894607
Rab33a	Rat	arsenous acid	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Arsenic Trioxide results in increased expression of RAB33A mRNA	CTD	PMID:20458559
Rab33a	Rat	belinostat	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	benzo[a]pyrene	multiple interactions	ISO	Rab33a (Mus musculus)	6480464	Benzo(a)pyrene promotes the reaction [AHR protein binds to RAB33A promoter]	CTD	PMID:19654925
Rab33a	Rat	benzo[a]pyrene	decreases methylation	ISO	RAB33A (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased methylation of RAB33A promoter	CTD	PMID:27901495
Rab33a	Rat	benzo[a]pyrene	decreases expression	ISO	Rab33a (Mus musculus)	6480464	Benzo(a)pyrene results in decreased expression of RAB33A mRNA	CTD	PMID:22228805
Rab33a	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of RAB33A mRNA	CTD	PMID:25181051
Rab33a	Rat	bisphenol A	increases expression	ISO	RAB33A (Homo sapiens)	6480464	bisphenol A results in increased expression of RAB33A mRNA	CTD	PMID:27685785
Rab33a	Rat	butanal	increases expression	ISO	RAB33A (Homo sapiens)	6480464	butyraldehyde results in increased expression of RAB33A mRNA	CTD	PMID:26079696
Rab33a	Rat	cadmium dichloride	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Cadmium Chloride results in decreased expression of RAB33A mRNA	CTD	PMID:38382870
Rab33a	Rat	chloroacetaldehyde	increases expression	ISO	RAB33A (Homo sapiens)	6480464	chloroacetaldehyde results in increased expression of RAB33A mRNA	CTD	PMID:25596134
Rab33a	Rat	diarsenic trioxide	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[Tretinoin co-treated with Arsenic Trioxide] results in increased expression of RAB33A mRNA	CTD	PMID:15894607
Rab33a	Rat	diarsenic trioxide	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Arsenic Trioxide results in increased expression of RAB33A mRNA	CTD	PMID:20458559
Rab33a	Rat	Dibutyl phosphate	affects expression	ISO	RAB33A (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of RAB33A mRNA	CTD	PMID:37042841
Rab33a	Rat	dibutyl phthalate	decreases expression	EXP		6480464	Dibutyl Phthalate results in decreased expression of RAB33A mRNA	CTD	PMID:21266533
Rab33a	Rat	dimethylarsinic acid	multiple interactions	ISO	Rab33a (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of RAB33A mRNA	CTD	PMID:34876320
Rab33a	Rat	dioxygen	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Oxygen deficiency results in increased expression of RAB33A mRNA	CTD	PMID:25596134
Rab33a	Rat	dorsomorphin	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Rab33a	Rat	endosulfan	increases expression	EXP		6480464	Endosulfan results in increased expression of RAB33A mRNA	CTD	PMID:29391264
Rab33a	Rat	entinostat	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	entinostat results in decreased expression of RAB33A mRNA	CTD	PMID:26272509
Rab33a	Rat	entinostat	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	ethanol	affects expression	ISO	Rab33a (Mus musculus)	6480464	Ethanol affects the expression of RAB33A mRNA	CTD	PMID:30319688
Rab33a	Rat	ethanol	increases expression	ISO	Rab33a (Mus musculus)	6480464	Ethanol results in increased expression of RAB33A mRNA	CTD	PMID:30319688
Rab33a	Rat	ethyl methanesulfonate	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Ethyl Methanesulfonate results in decreased expression of RAB33A mRNA	CTD	PMID:23649840
Rab33a	Rat	ferroheme b	increases expression	ISO	Rab33a (Mus musculus)	6480464	Heme metabolite results in increased expression of RAB33A mRNA	CTD	PMID:19191707
Rab33a	Rat	formaldehyde	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Formaldehyde results in decreased expression of RAB33A mRNA	CTD	PMID:23649840
Rab33a	Rat	heme b	increases expression	ISO	Rab33a (Mus musculus)	6480464	Heme metabolite results in increased expression of RAB33A mRNA	CTD	PMID:19191707
Rab33a	Rat	Licochalcone B	increases expression	ISO	RAB33A (Homo sapiens)	6480464	licochalcone B results in increased expression of RAB33A mRNA	CTD	PMID:33647349
Rab33a	Rat	lipopolysaccharide	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[S-(1 and 2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of RAB33A mRNA	CTD	PMID:35811015
Rab33a	Rat	mercury dibromide	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	mercuric bromide results in decreased expression of RAB33A mRNA	CTD	PMID:26272509
Rab33a	Rat	mercury dibromide	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	metformin	increases expression	EXP		6480464	Metformin results in increased expression of RAB33A mRNA	CTD	PMID:25596134
Rab33a	Rat	methyl methanesulfonate	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Methyl Methanesulfonate results in decreased expression of RAB33A mRNA	CTD	PMID:23649840
Rab33a	Rat	methylarsonic acid	multiple interactions	ISO	Rab33a (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of RAB33A mRNA	CTD	PMID:34876320
Rab33a	Rat	N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal	decreases expression	ISO	Rab33a (Mus musculus)	6480464	benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in decreased expression of RAB33A mRNA	CTD	PMID:25566086
Rab33a	Rat	p-chloromercuribenzoic acid	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	p-Chloromercuribenzoic Acid results in decreased expression of RAB33A mRNA	CTD	PMID:26272509
Rab33a	Rat	p-chloromercuribenzoic acid	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	panobinostat	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	panobinostat	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	panobinostat results in decreased expression of RAB33A mRNA	CTD	PMID:26272509
Rab33a	Rat	paracetamol	decreases expression	EXP		6480464	Acetaminophen results in decreased expression of RAB33A mRNA	CTD	PMID:33387578
Rab33a	Rat	paraquat	increases expression	EXP		6480464	Paraquat results in increased expression of RAB33A mRNA	CTD	PMID:32680482
Rab33a	Rat	pentanal	increases expression	ISO	RAB33A (Homo sapiens)	6480464	pentanal results in increased expression of RAB33A mRNA	CTD	PMID:26079696
Rab33a	Rat	phenobarbital	multiple interactions	ISO	Rab33a (Mus musculus)	6480464	NR1I3 protein affects the reaction [Phenobarbital results in increased expression of RAB33A mRNA]	CTD	PMID:19482888
Rab33a	Rat	phenobarbital	increases expression	ISO	Rab33a (Mus musculus)	6480464	Phenobarbital results in increased expression of RAB33A mRNA	CTD	PMID:19482888
Rab33a	Rat	phenylmercury acetate	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Phenylmercuric Acetate results in decreased expression of RAB33A mRNA	CTD	PMID:26272509
Rab33a	Rat	phenylmercury acetate	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	protein kinase inhibitor	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	Protein Kinase Inhibitors inhibits the reaction [gardiquimod results in increased expression of RAB33A mRNA]	CTD	PMID:28003376
Rab33a	Rat	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[S-(1 and 2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of RAB33A mRNA	CTD	PMID:35811015
Rab33a	Rat	SB 431542	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Rab33a	Rat	silicon dioxide	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Silicon Dioxide analog results in decreased expression of RAB33A mRNA	CTD	PMID:25895662
Rab33a	Rat	sodium arsenate	multiple interactions	ISO	Rab33a (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of RAB33A mRNA	CTD	PMID:34876320
Rab33a	Rat	sodium arsenite	multiple interactions	ISO	Rab33a (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of RAB33A mRNA	CTD	PMID:34876320
Rab33a	Rat	sodium dodecyl sulfate	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Sodium Dodecyl Sulfate results in increased expression of RAB33A mRNA	CTD	PMID:31734321
Rab33a	Rat	sunitinib	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Sunitinib results in increased expression of RAB33A mRNA	CTD	PMID:31533062
Rab33a	Rat	temozolomide	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Temozolomide results in decreased expression of RAB33A mRNA	CTD	PMID:31758290
Rab33a	Rat	titanium dioxide	decreases expression	ISO	Rab33a (Mus musculus)	6480464	titanium dioxide results in decreased expression of RAB33A mRNA	CTD	PMID:29264374
Rab33a	Rat	trichloroethene	decreases expression	EXP		6480464	Trichloroethylene results in decreased expression of RAB33A mRNA	CTD	PMID:33387578
Rab33a	Rat	trichostatin A	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	trichostatin A results in decreased expression of RAB33A mRNA	CTD	PMID:24935251
Rab33a	Rat	trichostatin A	increases expression	ISO	RAB33A (Homo sapiens)	6480464	trichostatin A results in increased expression of RAB33A mRNA	CTD	PMID:24935251
Rab33a	Rat	triclosan	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Triclosan results in increased expression of RAB33A mRNA	CTD	PMID:30510588
Rab33a	Rat	triphenyl phosphate	affects expression	ISO	RAB33A (Homo sapiens)	6480464	triphenyl phosphate affects the expression of RAB33A mRNA	CTD	PMID:37042841
Rab33a	Rat	triptonide	increases expression	ISO	Rab33a (Mus musculus)	6480464	triptonide results in increased expression of RAB33A mRNA	CTD	PMID:33045310
Rab33a	Rat	valproic acid	affects expression	ISO	RAB33A (Homo sapiens)	6480464	Valproic Acid affects the expression of RAB33A mRNA	CTD	PMID:25979313
Rab33a	Rat	valproic acid	multiple interactions	ISO	RAB33A (Homo sapiens)	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of RAB33A mRNA	CTD	PMID:27188386
Rab33a	Rat	valproic acid	decreases expression	ISO	RAB33A (Homo sapiens)	6480464	Valproic Acid results in decreased expression of RAB33A mRNA	CTD	PMID:24935251 and PMID:26272509
Rab33a	Rat	valproic acid	increases expression	ISO	RAB33A (Homo sapiens)	6480464	Valproic Acid results in increased expression of RAB33A mRNA	CTD	PMID:24935251
Rab33a	Rat	vinclozolin	increases expression	EXP		6480464	vinclozolin results in increased expression of RAB33A mRNA	CTD	PMID:22570695

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab33a	Rat	antigen processing and presentation	involved_in	ISO	RAB33A (Homo sapiens)	1624291	PMID:19717423	RGD	PMID:19717423
Rab33a	Rat	antigen processing and presentation	involved_in	IEA	UniProtKB:Q14088 and ensembl:ENSP00000257017	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Rab33a	Rat	autophagosome assembly	involved_in	IBA	MGI:1330805 and PANTHER:PTN002374832	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab33a	Rat	Rab protein signal transduction	involved_in	IEA	InterPro:IPR041822	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab33a	Rat	endomembrane system	located_in	IEA	UniProtKB-SubCell:SL-0147	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Rab33a	Rat	endosome	is_active_in	IBA	PANTHER:PTN000635999 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab33a	Rat	Golgi apparatus	is_active_in	IBA	MGI:1330805 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab33a	Rat	GTP binding	enables	IBA	PANTHER:PTN004662974 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab33a	Rat	GTP binding	enables	IEA	InterPro:IPR001806 and InterPro:IPR005225	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Rab33a	Rat	GTP binding	enables	IEA	UniProtKB-KW:KW-0342	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Rab33a	Rat	GTPase activity	enables	IBA	CGD:CAL0000197426 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Rab33a	Rat	GTPase activity	enables	IEA	InterPro:IPR001806 and InterPro:IPR041822	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Rab33a	Rat	protein binding	enables	ISO	RAB33A (Homo sapiens)	1624291	UniProtKB:O76011 more ...	RGD	PMID:16189514 more ...

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:19717423	PMID:21383079	PMID:22740627	PMID:22972995	PMID:25871792

Rab33a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	132,572,133 - 132,584,255 (+)	NCBI		GRCr8
mRatBN7.2	X	127,694,219 - 127,706,378 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	127,694,964 - 127,706,378 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	129,820,706 - 129,832,102 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	133,391,515 - 133,402,927 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	130,917,865 - 130,929,261 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	135,348,799 - 135,360,204 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	135,348,436 - 135,360,203 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	135,420,269 - 135,431,674 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	134,913,903 - 134,925,308 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	126,643,393 - 126,654,798 (+)	NCBI		Celera
Cytogenetic Map	X	q36	NCBI

RAB33A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	130,110,623 - 130,184,870 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	130,171,962 - 130,184,870 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	129,305,936 - 129,318,844 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	129,133,454 - 129,146,525 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	129,031,307 - 129,044,378	NCBI
Celera	X	129,692,335 - 129,705,325 (+)	NCBI		Celera
Cytogenetic Map	X	q26.1	NCBI
HuRef	X	118,701,562 - 118,715,130 (+)	NCBI		HuRef
CHM1_1	X	129,217,402 - 129,230,486 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	128,429,426 - 128,503,675 (+)	NCBI		T2T-CHM13v2.0

Rab33a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	47,602,540 - 47,619,112 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	47,608,162 - 47,619,109 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	48,513,663 - 48,530,240 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	48,519,285 - 48,530,232 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	45,872,647 - 45,883,409 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	44,764,097 - 44,774,859 (+)	NCBI		MGSCv36	mm8
Celera	X	36,021,110 - 36,031,749 (+)	NCBI		Celera
Cytogenetic Map	X	A5	NCBI
cM Map	X	25.68	NCBI

Rab33a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955473	4,875,202 - 4,887,177 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955473	4,875,230 - 4,891,898 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB33A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	129,589,775 - 129,605,230 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	129,593,388 - 129,608,845 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	119,298,428 - 119,311,625 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	129,591,231 - 129,605,214 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	129,591,222 - 129,605,214 (+)	Ensembl	panpan1.1		panPan2

RAB33A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	101,311,752 - 101,322,825 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	101,312,611 - 101,322,689 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	87,489,539 - 87,500,593 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	103,168,072 - 103,179,136 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	103,168,952 - 103,178,995 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	100,585,386 - 100,596,426 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	102,431,428 - 102,442,487 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	102,209,808 - 102,220,845 (+)	NCBI		UU_Cfam_GSD_1.0

Rab33a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	99,550,127 - 99,561,728 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936479	1,425,722 - 1,437,374 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936479	1,425,765 - 1,437,338 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB33A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	106,712,398 - 106,723,404 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	106,708,402 - 106,723,803 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	122,480,414 - 122,491,875 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB33A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	105,421,709 - 105,437,206 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	105,424,290 - 105,437,169 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	42,850,170 - 42,864,050 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab33a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624797	9,389,732 - 9,401,312 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624797	9,389,651 - 9,401,260 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Rab33a
23 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	39
Count of miRNA genes:	35
Interacting mature miRNAs:	39
Transcripts:	ENSRNOT00000008868
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598872	Memor14	Memory QTL 14	4.5		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	93956491	138956491	Rat
1598856	Memor1	Memory QTL 1	1.9		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	X	103312877	148312877	Rat
1598809	Memor15	Memory QTL 15	4.4		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	103312877	148312877	Rat
738025	Stresp3	Stress response QTL 3	4.61	0.0066	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	100567703	150256146	Rat
634346	Insul4	Insulin level QTL 4	0		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	X	126975089	152453651	Rat
738029	Stresp2	Stress response QTL 2	3.4	0.0004	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	112934952	138400867	Rat
10059603	Bw174	Body weight QTL 174	3.4	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	X	113937816	152453651	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	41052407	146860749	Rat

D83277

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	127,706,245 - 127,706,343 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	135,360,072 - 135,360,169	NCBI	Rnor6.0
Rnor_5.0	X	135,431,542 - 135,431,639	UniSTS	Rnor5.0
RGSC_v3.4	X	134,925,176 - 134,925,273	UniSTS	RGSC3.4
Celera	X	126,654,666 - 126,654,763	UniSTS
Cytogenetic Map	X	q35	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	88	87	56	25	56	6	215	97	93	45	60	31


RefSeq Transcripts	NM_001108257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000008868 ⟹ ENSRNOP00000008868

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	127,694,964 - 127,706,378 (+)	Ensembl
Rnor_6.0 Ensembl	X	135,348,436 - 135,360,203 (+)	Ensembl

RefSeq Acc Id:

NM_001108257 ⟹ NP_001101727

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	132,572,845 - 132,584,254 (+)	NCBI
mRatBN7.2	X	127,694,964 - 127,706,378 (+)	NCBI
Rnor_6.0	X	135,348,799 - 135,360,204 (+)	NCBI
Rnor_5.0	X	135,420,269 - 135,431,674 (+)	NCBI
RGSC_v3.4	X	134,913,903 - 134,925,308 (+)	RGD
Celera	X	126,643,393 - 126,654,798 (+)	RGD

Sequence:

show sequence

CCGCACACGAACACACACACACACACACACACACACACACACACACACACACGCACGCACGCACAAAGCTCTCTCGCTTTAAGCGCACTAACGTGGCCGCTTTCTTTGTGTGGAGCCCGCGAGTGGGG
TTGGGACCCGGGTCCTGTCCCGGGGAGATGGCGCAGCCCATCCTGGGCCATGGGAGCCTGCAGCCCGCCTCAGCTGCTGGCTTAGCATCCTTGGAGCTCGACTCATCGATGGACCAGTACGTGCAGAT
TCGCATTTTCAAAATCATCGTGATTGGGGACTCCAACGTGGGCAAGACCTGCCTGACCTTCCGCTTCTGCGGGGGTACTTTCCCAGACAAGACTGAGGCCACTATCGGTGTGGACTTCAGGGAGAAGA
CCGTGGAAATCGAGGGCGAGAAGATCAAGGTTCAGGTGTGGGACACGGCAGGACAAGAACGCTTCCGTAAAAGCATGGTTGAGCATTATTACCGCAATGTGCATGCAGTGGTCTTTGTCTATGACGTC
ACCAAGATGACCTCCTTCACCAACTTAAAAATGTGGATCCAGGAATGCAATGGGCATGCTGTGCCCCCGCTAGTCCCAAAGGTGCTTGTGGGTAACAAGTGTGACTTGAGGGAACAGATCCAGGTACC
CTCCAACTTAGCCCTGAAATTTGCTGATGCCCACAACATGCTCTTATTTGAGACATCAGCCAAGGACCCCAAAGAAAGCCAGAATGTGGAGTCAATCTTCATGTGCCTGGCTTGCCGACTGAAGGCCC
AGAAATCCCTCTTGTACCGTGATGCTGAGAGGCAGCAAGGAAAGGTGCAGACACTGGAGTTCCCACAGGAAGCTAACAGTAAAACTTCCTGTCCTTGTTGAAACCAAATGGTGTAAATACTCGAGAGC
ACTGGAGTTTTTTCTTCCCCTTTTTTTCTGTGCCTGCATAATGCTCACACCTGCTTGTTTCCATACAAACTAATATCAAAAATAAAATTTGTATAGATT

hide sequence

RefSeq Acc Id:

XM_039099851 ⟹ XP_038955779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	132,572,133 - 132,584,255 (+)	NCBI
mRatBN7.2	X	127,694,219 - 127,705,931 (+)	NCBI


Protein RefSeqs	NP_001101727	(Get FASTA)	NCBI Sequence Viewer
	XP_038955779	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM10919	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000008868
	ENSRNOP00000008868.2

RefSeq Acc Id:

NP_001101727 ⟸ NM_001108257

- UniProtKB:

D3ZCU8 (UniProtKB/TrEMBL), A6JMQ7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQPILGHGSLQPASAAGLASLELDSSMDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNL
KMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQTLEFPQEANSKTSCPC

hide sequence

Ensembl Acc Id:

ENSRNOP00000008868 ⟸ ENSRNOT00000008868

RefSeq Acc Id:	XP_038955779 ⟸ XM_039099851
- Peptide Label:	isoform X1

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZCU8-F1-model_v2	AlphaFold	D3ZCU8	1-237	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-1129	BioCyc
Ensembl Genes	ENSRNOG00000006698	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000008868	ENTREZGENE
	ENSRNOT00000008868.5	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Rab33A/B	UniProtKB/TrEMBL
	Ras_GTPase	UniProtKB/TrEMBL
	Small_GTP-bd	UniProtKB/TrEMBL
KEGG Report	rno:317580	UniProtKB/TrEMBL
NCBI Gene	317580	ENTREZGENE
PANTHER	PTHR47978	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PhenoGen	Rab33a	PhenoGen
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000006698	RatGTEx
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A6JMQ7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZCU8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Rab33a	RAB33A, member of RAS oncogene family	Rab33a_predicted	RAB33A, member of RAS oncogene family (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Rab33a_predicted	RAB33A, member of RAS oncogene family (predicted)	RGD1563280_predicted	similar to Ras-related protein Rab-33A (Small GTP-binding protein S10) (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1563280_predicted	similar to Ras-related protein Rab-33A (Small GTP-binding protein S10) (predicted)	LOC317580	similar to Ras-related protein Rab-33A (Small GTP-binding protein S10)	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC317580	similar to Ras-related protein Rab-33A (Small GTP-binding protein S10)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar