Symbol:
Nsun6
Name:
NOP2/Sun RNA methyltransferase 6
RGD ID:
1309535
Description:
Predicted to enable tRNA (cytidine-5-)-methyltransferase activity and tRNA binding activity. Predicted to be involved in tRNA C5-cytosine methylation. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 82. Orthologous to human NSUN6 (NOP2/Sun RNA methyltransferase 6); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; aflatoxin B1.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
LOC307148; NOL1/NOP2/Sun domain family, member 6; NOP2/Sun domain family, member 6; NOP2/Sun RNA methyltransferase family member 6; Nopd1; nucleolar protein (NOL1/NOP2/sun) and PUA domains 1; putative methyltransferase NSUN6; tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
NSUN6 (NOP2/Sun RNA methyltransferase 6)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Nsun6 (NOL1/NOP2/Sun domain family member 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Nsun6 (NOP2/Sun RNA methyltransferase 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
NSUN6 (NOP2/Sun RNA methyltransferase 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
NSUN6 (NOP2/Sun RNA methyltransferase 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Nsun6 (NOP2/Sun RNA methyltransferase 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
LOC100524391 (putative methyltransferase NSUN6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
NSUN6 (NOP2/Sun RNA methyltransferase 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Nsun6 (NOP2/Sun RNA methyltransferase 6)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
NSUN6 (NOP2/Sun RNA methyltransferase 6)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Nsun6 (NOL1/NOP2/Sun domain family member 6)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
nsun6 (NOL1/NOP2/Sun domain family, member 6)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
CG11109
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
nsun6
Alliance
DIOPT (Ensembl Compara|OMA|OrthoFinder|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 17 82,820,938 - 82,864,140 (-) NCBI GRCr8 mRatBN7.2 17 77,912,374 - 77,955,694 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 17 77,912,377 - 77,950,006 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 17 81,362,773 - 81,400,399 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 17 85,198,207 - 85,235,841 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 17 79,246,103 - 79,283,733 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 17 82,020,316 - 82,060,533 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 17 82,022,490 - 82,060,123 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 17 83,762,303 - 83,802,132 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 17 89,082,141 - 89,120,005 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 17 89,092,973 - 89,133,621 (-) NCBI Celera 17 77,243,863 - 77,281,371 (-) NCBI Celera Cytogenetic Map 17 q12.3 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Nsun6 Rat (-)-epigallocatechin 3-gallate multiple interactions ISO NSUN6 (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of NSUN6 mRNA CTD PMID:22079256 Nsun6 Rat 1,2-dimethylhydrazine decreases expression ISO Nsun6 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of NSUN6 mRNA CTD PMID:22206623 Nsun6 Rat 17alpha-ethynylestradiol affects expression ISO Nsun6 (Mus musculus) 6480464 Ethinyl Estradiol affects the expression of NSUN6 mRNA CTD PMID:17555576 Nsun6 Rat 17alpha-ethynylestradiol multiple interactions ISO Nsun6 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of NSUN6 mRNA CTD PMID:17942748 Nsun6 Rat 17alpha-ethynylestradiol increases expression ISO Nsun6 (Mus musculus) 6480464 Ethinyl Estradiol results in increased expression of NSUN6 mRNA CTD PMID:17942748 Nsun6 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Nsun6 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of NSUN6 mRNA CTD PMID:17942748 Nsun6 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of NSUN6 mRNA CTD PMID:33387578 Nsun6 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Nsun6 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of NSUN6 mRNA CTD PMID:21570461 Nsun6 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO NSUN6 (Homo sapiens) 6480464 Tetrachlorodibenzodioxin affects the expression of NSUN6 mRNA CTD PMID:22298810 Nsun6 Rat 2-palmitoylglycerol increases expression ISO NSUN6 (Homo sapiens) 6480464 2-palmitoylglycerol results in increased expression of NSUN6 mRNA CTD PMID:37199045 Nsun6 Rat 3,4-methylenedioxymethamphetamine decreases expression ISO Nsun6 (Mus musculus) 6480464 N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of NSUN6 mRNA CTD PMID:26251327 Nsun6 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of NSUN6 mRNA CTD PMID:24780913 Nsun6 Rat aflatoxin B1 increases expression ISO Nsun6 (Mus musculus) 6480464 Aflatoxin B1 results in increased expression of NSUN6 mRNA CTD PMID:19770486 Nsun6 Rat aflatoxin B1 decreases expression ISO NSUN6 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of NSUN6 mRNA CTD PMID:32234424 Nsun6 Rat aflatoxin B1 increases expression EXP 6480464 Aflatoxin B1 results in increased expression of NSUN6 mRNA CTD PMID:33354967 Nsun6 Rat all-trans-retinoic acid decreases expression ISO NSUN6 (Homo sapiens) 6480464 Tretinoin results in decreased expression of NSUN6 mRNA CTD PMID:33167477 Nsun6 Rat atrazine decreases expression ISO NSUN6 (Homo sapiens) 6480464 Atrazine results in decreased expression of NSUN6 mRNA CTD PMID:22378314 Nsun6 Rat benzo[a]pyrene decreases expression ISO NSUN6 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of NSUN6 mRNA CTD PMID:32234424 Nsun6 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of NSUN6 mRNA CTD PMID:34947998 Nsun6 Rat cadmium atom multiple interactions ISO NSUN6 (Homo sapiens) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of NSUN6 mRNA CTD PMID:35301059 Nsun6 Rat cadmium dichloride decreases expression EXP 6480464 Cadmium Chloride results in decreased expression of NSUN6 mRNA CTD PMID:33453195 Nsun6 Rat cadmium dichloride multiple interactions ISO NSUN6 (Homo sapiens) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of NSUN6 mRNA CTD PMID:35301059 Nsun6 Rat cadmium dichloride decreases expression ISO NSUN6 (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of NSUN6 mRNA CTD PMID:38568856 Nsun6 Rat calcitriol increases expression ISO NSUN6 (Homo sapiens) 6480464 Calcitriol results in increased expression of NSUN6 mRNA CTD PMID:16002434 Nsun6 Rat CGP 52608 multiple interactions ISO NSUN6 (Homo sapiens) 6480464 CGP 52608 promotes the reaction [RORA protein binds to NSUN6 gene] CTD PMID:28238834 Nsun6 Rat chlorpyrifos decreases expression ISO Nsun6 (Mus musculus) 6480464 Chlorpyrifos results in decreased expression of NSUN6 mRNA CTD PMID:37019170 Nsun6 Rat crocidolite asbestos decreases expression ISO Nsun6 (Mus musculus) 6480464 Asbestos and Crocidolite results in decreased expression of NSUN6 mRNA CTD PMID:29279043 Nsun6 Rat cyclosporin A decreases expression ISO NSUN6 (Homo sapiens) 6480464 Cyclosporine results in decreased expression of NSUN6 mRNA CTD PMID:20106945 Nsun6 Rat dicrotophos decreases expression ISO NSUN6 (Homo sapiens) 6480464 dicrotophos results in decreased expression of NSUN6 mRNA CTD PMID:28302478 Nsun6 Rat doxorubicin decreases expression ISO NSUN6 (Homo sapiens) 6480464 Doxorubicin results in decreased expression of NSUN6 mRNA CTD PMID:29803840 Nsun6 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of NSUN6 mRNA CTD PMID:33387578 Nsun6 Rat leflunomide increases expression ISO NSUN6 (Homo sapiens) 6480464 leflunomide results in increased expression of NSUN6 mRNA CTD PMID:28988120 Nsun6 Rat methyl methanesulfonate increases expression ISO NSUN6 (Homo sapiens) 6480464 Methyl Methanesulfonate results in increased expression of NSUN6 mRNA CTD PMID:23649840 Nsun6 Rat methylmercury chloride decreases expression ISO NSUN6 (Homo sapiens) 6480464 methylmercuric chloride results in decreased expression of NSUN6 mRNA CTD PMID:28001369 Nsun6 Rat N-Nitrosopyrrolidine decreases expression ISO NSUN6 (Homo sapiens) 6480464 N-Nitrosopyrrolidine results in decreased expression of NSUN6 mRNA CTD PMID:32234424 Nsun6 Rat p-chloromercuribenzoic acid increases expression ISO NSUN6 (Homo sapiens) 6480464 p-Chloromercuribenzoic Acid results in increased expression of NSUN6 mRNA CTD PMID:26272509 Nsun6 Rat paracetamol decreases expression ISO NSUN6 (Homo sapiens) 6480464 Acetaminophen results in decreased expression of NSUN6 mRNA CTD PMID:21420995 Nsun6 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of NSUN6 mRNA CTD PMID:33387578 Nsun6 Rat pirinixic acid multiple interactions ISO NSUN6 (Homo sapiens) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in increased expression of NSUN6 mRNA CTD PMID:19710929 Nsun6 Rat pirinixic acid increases expression ISO Nsun6 (Mus musculus) 6480464 pirinixic acid results in increased expression of NSUN6 mRNA CTD PMID:23811191 Nsun6 Rat potassium chromate decreases expression ISO NSUN6 (Homo sapiens) 6480464 potassium chromate(VI) results in decreased expression of NSUN6 mRNA CTD PMID:22079256 Nsun6 Rat potassium chromate multiple interactions ISO NSUN6 (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of NSUN6 mRNA CTD PMID:22079256 Nsun6 Rat potassium dichromate increases expression ISO Nsun6 (Mus musculus) 6480464 Potassium Dichromate results in increased expression of NSUN6 mRNA CTD PMID:23608068 Nsun6 Rat quercetin increases expression ISO NSUN6 (Homo sapiens) 6480464 Quercetin results in increased expression of NSUN6 mRNA CTD PMID:21632981 Nsun6 Rat resveratrol multiple interactions ISO NSUN6 (Homo sapiens) 6480464 [Plant Extracts co-treated with Resveratrol] results in increased expression of NSUN6 mRNA CTD PMID:23557933 Nsun6 Rat tamoxifen affects expression ISO Nsun6 (Mus musculus) 6480464 Tamoxifen affects the expression of NSUN6 mRNA CTD PMID:17555576 Nsun6 Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of NSUN6 mRNA CTD PMID:23411599 Nsun6 Rat trichostatin A increases expression ISO NSUN6 (Homo sapiens) 6480464 trichostatin A results in increased expression of NSUN6 mRNA CTD PMID:24935251 Nsun6 Rat triphenyl phosphate affects expression ISO NSUN6 (Homo sapiens) 6480464 triphenyl phosphate affects the expression of NSUN6 mRNA CTD PMID:37042841 Nsun6 Rat triptonide increases expression ISO Nsun6 (Mus musculus) 6480464 triptonide results in increased expression of NSUN6 mRNA CTD PMID:33045310 Nsun6 Rat urethane decreases expression ISO NSUN6 (Homo sapiens) 6480464 Urethane results in decreased expression of NSUN6 mRNA CTD PMID:28818685 Nsun6 Rat valproic acid affects expression ISO NSUN6 (Homo sapiens) 6480464 Valproic Acid affects the expression of NSUN6 mRNA CTD PMID:25979313 Nsun6 Rat valproic acid decreases expression ISO NSUN6 (Homo sapiens) 6480464 Valproic Acid results in decreased expression of NSUN6 mRNA CTD PMID:26272509 Nsun6 Rat vinclozolin decreases methylation EXP 6480464 vinclozolin results in decreased methylation of NSUN6 gene CTD PMID:31682807
Nsun6 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 17 82,820,938 - 82,864,140 (-) NCBI GRCr8 mRatBN7.2 17 77,912,374 - 77,955,694 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 17 77,912,377 - 77,950,006 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 17 81,362,773 - 81,400,399 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 17 85,198,207 - 85,235,841 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 17 79,246,103 - 79,283,733 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 17 82,020,316 - 82,060,533 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 17 82,022,490 - 82,060,123 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 17 83,762,303 - 83,802,132 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 17 89,082,141 - 89,120,005 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 17 89,092,973 - 89,133,621 (-) NCBI Celera 17 77,243,863 - 77,281,371 (-) NCBI Celera Cytogenetic Map 17 q12.3 NCBI
NSUN6 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 10 18,545,561 - 18,659,327 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 10 18,545,561 - 18,659,285 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 10 18,834,490 - 18,948,167 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 10 18,874,496 - 18,980,556 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 10 18,874,496 - 18,980,556 NCBI Celera 10 18,521,149 - 18,626,065 (-) NCBI Celera Cytogenetic Map 10 p12.31 NCBI HuRef 10 18,499,194 - 18,601,001 (-) NCBI HuRef CHM1_1 10 18,834,237 - 18,940,666 (-) NCBI CHM1_1 T2T-CHM13v2.0 10 18,531,853 - 18,678,450 (-) NCBI T2T-CHM13v2.0
Nsun6 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 14,995,255 - 15,059,683 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 14,999,942 - 15,059,880 (-) Ensembl GRCm39 Ensembl GRCm38 2 14,990,444 - 15,055,144 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 14,995,131 - 15,055,069 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 14,916,758 - 14,976,499 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 14,912,885 - 14,967,034 (-) NCBI MGSCv36 mm8 Celera 2 14,896,553 - 14,956,518 (-) NCBI Celera Cytogenetic Map 2 A2 NCBI cM Map 2 10.94 NCBI
Nsun6 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955429 9,594,958 - 9,639,614 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955429 9,594,964 - 9,639,614 (+) NCBI ChiLan1.0 ChiLan1.0
NSUN6 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 8 31,357,321 - 31,503,780 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 10 31,362,641 - 31,509,101 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 10 18,864,484 - 18,978,297 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 10 19,196,248 - 19,304,089 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 10 19,199,642 - 19,304,089 (-) Ensembl panpan1.1 panPan2
NSUN6 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 2 18,477,150 - 18,534,716 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 2 18,477,211 - 18,534,710 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 2 15,577,663 - 15,635,061 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 2 18,768,581 - 18,826,397 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 2 18,768,608 - 18,826,397 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 2 15,967,679 - 16,025,183 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 2 16,803,798 - 16,861,307 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 2 17,423,182 - 17,480,898 (+) NCBI UU_Cfam_GSD_1.0
Nsun6 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409344 18,973,762 - 19,056,564 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936520 8,909,480 - 8,950,925 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936520 8,909,509 - 8,950,960 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
LOC100524391 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 10 44,891,257 - 44,958,004 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 10 44,884,179 - 44,958,024 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 10 49,623,237 - 49,696,451 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
NSUN6 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 9 18,475,421 - 18,569,988 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 9 18,475,802 - 18,568,620 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666051 24,130,556 - 24,226,265 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Nsun6 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 54 Count of miRNA genes: 48 Interacting mature miRNAs: 54 Transcripts: ENSRNOT00000025046 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
8694181 Bw151 Body weight QTL 151 4.36 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 17 48560935 86533673 Rat 1358295 Aocep1 Aortic cell protein QTL 1 6.1 7e-07 thoracic aorta cellular protein amount (VT:0010598) aortic cell percentage 17 40990005 85990005 Rat 12904736 Cm121 Cardiac mass QTL 121 0.043 heart mass (VT:0007028) heart wet weight to body weight ratio (CMO:0002408) 17 71774621 82479847 Rat 152023626 Bp403 Blood pressure QTL 403 3.86 arterial blood pressure trait (VT:2000000) 17 23930421 79524188 Rat 7411575 Bw140 Body weight QTL 140 30.2 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 17 48560935 86533673 Rat 2301412 Kidm40 Kidney mass QTL 40 0.001 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 17 37479847 82479847 Rat 2317060 Aia26 Adjuvant induced arthritis QTL 26 3.22 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 17 38281509 83281509 Rat 631502 Cm26 Cardiac mass QTL 26 3.71 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 17 65703580 81153923 Rat 1354588 Bvd4 Brain ventricular dilatation QTL 4 5.31 0.001 brain ventricle morphology trait (VT:0000822) hydrocephalus severity score (CMO:0001881) 17 53498828 82479847 Rat 7411577 Bw141 Body weight QTL 141 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 17 62619516 86533673 Rat 4889894 Eae33 Experimental allergic encephalomyelitis QTL 33 5.2 0.0001 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis severity score (CMO:0001419) 17 50909099 86022412 Rat 2317038 Ginf3 Gastrointestinal inflammation QTL 3 2.89 0.005 liver integrity trait (VT:0010547) liver granuloma severity score (CMO:0002157) 17 49920154 86533673 Rat 1598871 Memor5 Memory QTL 5 5.3 exploratory behavior trait (VT:0010471) total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443) 17 40540041 80387013 Rat 1300129 Rf25 Renal function QTL 25 3.03 blood creatinine amount (VT:0005328) creatinine clearance (CMO:0000765) 17 71003325 81153923 Rat 152023740 Bp406 Blood pressure QTL 406 6.06 arterial blood pressure trait (VT:2000000) 17 23930421 79524188 Rat 1354663 Bvd5 Brain ventricular dilatation QTL 5 3.51 0.001 brain ventricle morphology trait (VT:0000822) hydrocephalus severity score (CMO:0001881) 17 31990784 81292925 Rat 11528636 Bss120 Bone structure and strength QTL 120 8.55 3e-09 femur morphology trait (VT:0000559) femoral neck width (CMO:0001695) 17 77830064 78603788 Rat 152023737 Bp405 Blood pressure QTL 405 5.06 arterial blood pressure trait (VT:2000000) 23930421 79524188 Rat 2317045 Aia11 Adjuvant induced arthritis QTL 11 4.06 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 17 60781426 86533673 Rat 152023736 Bp404 Blood pressure QTL 404 3.78 arterial blood pressure trait (VT:2000000) 17 23930421 79524188 Rat 152025238 Slep14 Serum leptin concentration QTL 14 4.62 blood leptin amount (VT:0005667) 17 24184890 79524188 Rat 2317054 Aia12 Adjuvant induced arthritis QTL 12 4.24 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 17 38281509 83281509 Rat 2302365 Gluco40 Glucose level QTL 40 4.79 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 17 57246843 82046127 Rat 2303580 Gluco49 Glucose level QTL 49 2 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 17 50040271 86533673 Rat
AI410582
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 17 77,912,448 - 77,912,542 (+) MAPPER mRatBN7.2 Rnor_6.0 17 82,022,562 - 82,022,655 NCBI Rnor6.0 Rnor_5.0 17 83,764,549 - 83,764,642 UniSTS Rnor5.0 RGSC_v3.4 17 89,082,213 - 89,082,306 UniSTS RGSC3.4 Celera 17 77,243,935 - 77,244,028 UniSTS RH 3.4 Map 17 792.8 UniSTS Cytogenetic Map 17 q12.3 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000025046 ⟹ ENSRNOP00000025046
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 17 77,912,377 - 77,950,006 (-) Ensembl Rnor_6.0 Ensembl 17 82,022,490 - 82,060,123 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000102323 ⟹ ENSRNOP00000094478
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 17 77,936,054 - 77,949,985 (-) Ensembl
RefSeq Acc Id:
NM_001107367 ⟹ NP_001100837
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,941 - 82,858,539 (-) NCBI mRatBN7.2 17 77,912,377 - 77,949,975 (-) NCBI Rnor_6.0 17 82,022,490 - 82,060,123 (-) NCBI Rnor_5.0 17 83,762,303 - 83,802,132 (-) NCBI RGSC_v3.4 17 89,082,141 - 89,120,005 (-) RGD Celera 17 77,243,863 - 77,281,371 (-) RGD
Sequence:
AGCGACTTTGTGTTCCGAAGCTGGGGCGCGGTTTTGGAAAATAGTGTGTGGGAGTGGACGTGCTGTTTTCCTATCTGCACTTAGGTACACTTGTTACCAAGCCGCGTTTGGCGCAGTGTCGCAGTTCG GAGCTTTCTCACGGCATCCCCGAGAAGGACAAACCTTGGGCCCCGCTCACTCCAGAACTCAACCCCGAAAGGCATTCTTGTGCTCGTCCATTGGCTGACAACGCTGTAATTCGGAAAGAAAGAAAAAG ACTGCTTTCCAACATTTTCTTGGACAATTACAGCAGAAAAAAAGAATGTATGTATTTCCAAAGATATCTTTGAGACCTGAAGTTGAAAACTATCTCAAAGAGAGCTTTTTGAACGAGGAGGTTGTGTC TGCTTCGAGCCAACAGGAAGCAGAAAGGAACTTTGAGACTCTGCTGCTTCGCCTGTCACACCCTCCGTTGTTCACGACTGTCAGAGTGAATACGCATTTAGGCTCAGTTGAGCATGTCAGAGGTCTGC TGCTTGAAGAGCTTCAGAAGCAGTTTGGTGGATCCAGCATTCCCGTTCTTCAGCATCCAGCCCTCCCGGATGTTCTACTCATCCCCATGACTGGACCAAGGAAGAATATAGAAAGACAACAGTGTGAA GTGATTGTTGGTGCACAGTGTGGCAATGCAGTATTAAGAGGGGCCCATGTCTATGTTCCAGGAGTTGTATCAGCTTCAAAGTTTATGAAAGCTGGAGATGTCGTTTCTGTGTATTCTGATATTAAAGG GAAATGTAAGAAAGGAGCCAAAGAGTTCGATGGAACTAAAGTATTTCTGGGAAACGGAATTTCTGAACTAAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAGGGTATAGGCATAAGAATGA CAGAACCCATATATCTCAGTCCCTCATTTGACAATGTTCTATCTGGTTATATATTTTTACAGAATTTGCCATCTACGGTTGTAGCTCATGTTCTTGATCCTCAACCTGGAGAGAAGATTCTAGATTTG TGTGCAGCACCAGGGGGCAAAACTACACACATTGCAGCACTGATGCGCGACCAGGGAGAAGTAATAGCATTGGACAAAATACTGACTAAAGTGACAAAATTAAAGCAGAATGCTTCATTATTAGGACT GCATTCTATCCGGGCGTTTTGCTTTGATGCAACAAAGGCTCTTAAGCTGGAGGTGATGGACGGCGTAGACGGGGCACCTCCATTCTTACCAGAATCTTTTGACCGAATTCTCCTTGACGCGCCCTGCA GTGGACTGGGACAGAGGCCAAATATGGCTTGCACTTGGACTTTGAAGGAAGTGACATCCTATCAGCCACTGCAGCGAAAACTCCTTAATGTGGCGGTTCGACTCCTGAAGCCAGGGGGTGTGCTGGTC TACAGCACGTGCACAGTAACTCTGGCAGAAAACGAAGAGCAAGTCGCCTGGGCCCTCAGAACATTCCCCTGCCTTCAACTTCAACCCCAGGAACCACAGATCGGAGGAGAAGGGATGCTGGGAGCTGG CCTGTCACTGGAGCAGCTGAAACAGCTGCAGCGCTTTGACCCGTGTGTTGTGCCTCTGGAGAGCATGGACACGAACTCTCTTGGAGATGCCAGAAGGGAAGACGTGATTTGGCTAGCCAACAAGGATT GTATAGGCTTCTTTATTGCAAAGTTTCTAAAATGTCAAAGCACAGAAAGGAAGGTTTCTCGGAAATGAAAATCCTGAATGCTGTCTGCGTGGTGCTGTTTCTTACACCAAAATGTTGTCAAGCCAACG GAGTGATGGCACGGTTGCTCAGGAAACAGGATATGCTAGCAGTTCCCCGGATTAGAAGGGGCAGTGTGTATATGTGGCCCTGGGAAAGTGAGGGCTAGTAAAGCAAAATCAGCCTCATGTTTCCTGAA AGGGAAGGAGGAGTCGCCTGGGGTCTGGAGCACACTTTCAGCACTAACTCATCAGTATTAGTCTTTCTAATGTGAAAAAATAGTTTAAAAACAAAAGAATAAACCTCTAAACCTTCAAAAAAAAAAAA AAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
XM_008771869 ⟹ XP_008770091
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,859,509 (-) NCBI mRatBN7.2 17 77,912,374 - 77,950,893 (-) NCBI Rnor_6.0 17 82,020,316 - 82,060,531 (-) NCBI
Sequence:
GCTCAATAGTTAAGGGCACTTGCATAGTGCCCAGGTTCCATTGTCAGCACCCATATGATAGCTT ACAACCAGAATGTCAGTTCCAGGGCATCAAACAGGCAAGCACGTGGTGCACGTGTATGCATGCAGACAAAACATTCATATTCTTAACATAAATACGTCTTTGAAGTAAAAGTGTCCGAGGGAGGCCTC CGTCGCTACTTGCACTGAGGACAATAAATGGAAACCTCCCTGATTCAGATTAGTGAGGTAGCCAGCTCAAATTAGCATTCAAGAGGCTCGGAGAACCTGCTTCCACTAGGCAGGGAAGAAGCACCACC TTCAGGGGGCAGGACTGGAAGTGATTGGCAGATGCAGGGTGGGCAGCCGGCGCCGGAAGTGACGAAACGACTTTGGAAGTGACGAGGAAGCGACTTTGTGTTCCGAAGCTGGGGCGCGGTTTTGGAAA ATAGTGTGTGGGAGTGGACGTGCTGTTTTCCTATCTGCACTTAGGTACACTTGTTACCAAGCCGCGTTTGGCGCAGTGTCGCAGTTCGGAGCTTTCTCACGGCATCCCCGAGAAGGACAAACCTTGGG CCCCGCTCACTCCAGAACTCAACCCCGAAAGGCATTCTTGTGCTCGTCCATTGGCTGACAACGCTGTAATTCGGAAAGAAAGAAAAAGACTGCTTTCCAACATTTTCTTGGACAATTACAGCAGAAAA AAAGAATGTATGTATTTCCAAAGATATCTTTGAGACCTGAAGTTGAAAACTATCTCAAAGAGAGCTTTTTGAACGAGGAGGTTGTGTCTGCTTCGAGCCAACAGGAAGCAGAAAGGAACTTTGAGACT CTGCTGCTTCGCCTGTCACACCCTCCGTTGTTCACGACTGTCAGAGTGAATACGCATTTAGGCTCAGTTGAGCATGTCAGAGGTCTGCTGCTTGAAGAGCTTCAGAAGTTTGGTGGATCCAGCATTCC CGTTCTTCAGCATCCAGCCCTCCCGGATGTTCTACTCATCCCCATGACTGGACCAAGGAAGAATATAGAAAGACAACAGTGTGAAGTGATTGTTGGTGCACAGTGTGGCAATGCAGTATTAAGAGGGG CCCATGTCTATGTTCCAGGAGTTGTATCAGCTTCAAAGTTTATGAAAGCTGGAGATGTCGTTTCTGTGTATTCTGATATTAAAGGGAAATGTAAGAAAGGAGCCAAAGAGTTCGATGGAACTAAAGTA TTTCTGGGAAACGGAATTTCTGAACTAAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAGGGTATAGGCATAAGAATGACAGAACCCATATATCTCAGTCCCTCATTTGACAATGTTCTATC TGGTTATATATTTTTACAGAATTTGCCATCTACGGTTGTAGCTCATGTTCTTGATCCTCAACCTGGAGAGAAGATTCTAGATTTGTGTGCAGCACCAGGGGGCAAAACTACACACATTGCAGCACTGA TGCGCGACCAGGGAGAAGTAATAGCATTGGACAAAATACTGACTAAAGTGACAAAATTAAAGCAGAATGCTTCATTATTAGGACTGCATTCTATCCGGGCGTTTTGCTTTGATGCAACAAAGGCTCTT AAGCTGGAGGTGATGGACGGCGTAGACGGGGCACCTCCATTCTTACCAGAATCTTTTGACCGAATTCTCCTTGACGCGCCCTGCAGTGGACTGGGACAGAGGCCAAATATGGCTTGCACTTGGACTTT GAAGGAAGTGACATCCTATCAGCCACTGCAGCGAAAACTCCTTAATGTGGCGGTTCGACTCCTGAAGCCAGGGGGTGTGCTGGTCTACAGCACGTGCACAGTAACTCTGGCAGAAAACGAAGAGCAAG TCGCCTGGGCCCTCAGAACATTCCCCTGCCTTCAACTTCAACCCCAGGAACCACAGATCGGAGGAGAAGGGATGCTGGGAGCTGGCCTGTCACTGGAGCAGCTGAAACAGCTGCAGCGCTTTGACCCG TGTGTTGTGCCTCTGGAGAGCATGGACACGAACTCTCTTGGAGATGCCAGAAGGGAAGACGTGATTTGGCTAGCCAACAAGGATTGTATAGGCTTCTTTATTGCAAAGTTTCTAAAATGTCAAAGCAC AGAAAGGAAGGTTTCTCGGAAATGAAAATCCTGAATGCTGTCTGCGTGGTGCTGTTTCTTACACCAAAATGTTGTCAAGCCAACGGAGTGATGGCACGGTTGCTCAGGAAACAGGATATGCTAGCAGT TCCCCGGATTAGAAGGGGCAGTGTGTATATGTGGCCCTGGGAAAGTGAGGGCTAGTAAAGCAAAATCAGCCTCATGTTTCCTGAAAGGGAAGGAGGAGTCGCCTGGGGTCTGGAGCACACTTTCAGCA CTAACTCATCAGTATTAGTCTTTCTAATGTGAAAAAATAGTTTAAAAACAAAAGAATAAACCTCTAAACCTTCCAAGTGGTCATGTAAAGCTGTTTTCTGTTTCCAAGACAGTGGTGGTTTCTTCAGT CAGTTTTCAGGACATGGGCAGTAATACTGACCTCGTCATGACTGAGGCTTCCCGTAGGAAGGTCTCTCAACGACTTACCGTATCCATCCTGACTGCAGCAGCTCTTGGATCAGGTAAAGCCTTTGGGT GGCTTCTTCCTGGAGAAAATCTCTTTTGAACAGCCCTGAGCTCTCTACATCCAAGTGCCTGTACCCAAGTGTATGTCCCAGCACATTGTGACGCCAGTGGACTGTTAGCTTGAGCTTCACTCCTGCAC CTGGGAAATGGACCAGGACAGATAAACGAGCCTCCCCTTTCTCATATCACTGCTTCAGAGTAGGTAGTCAGTGGTATTATGGAATATGAAAAGTTCTCTTGAATTTCCCAAGATTCAAGTATATAAGC AAGCCTTTTCTATCTTTCATTCTGCCTGTGTCCAGGAGATTTTGACTGAAGAGAAACACCATCTCCTTGAGGCACTTCTGATTCTGGGAATTCAGGTAGCCCCCCCCCTTTTTTAAATGTATTTTAAG CAACTCTATAATCATGGTTTCCTTTCTTGCTCTCTGCACATCTGTATGTGATAAGCTAGGGTGAGAGTGGGAGAGGAACAGCCAAGCAGCAAACCTGCCAGACTTTTTACCCATTCTAGTAAATACCA GCGTGCACACGGAGCCAGCAAAAGAAAACTGCGTGTGTTCAGAACAGCAAGGATAGGGAATGCTGTTAACAGTTTCCTGTTTAAACTAAGCCATTCTCAGTGGATTGCTTCCTTTCAAACTTGAAAGA AATCCACATATTCTTCAGCATATCTTTTAGCATACTTAGTTTTAATATAGATTATTTCTATGAAAACAGGAAAAAAAAGCATTTATTTGGTAAAAAAAATACATTTTAATTAAAACCCTATGTTAGAT TTTAGTTTATATAGCAAAGTGAAGTAAAACAGATAATAAGGCCCAGAGTCAGCAATATGACACTTACTGGATAAGACCAGAAGATCAAGGAGAAACGGAGTCGTGTCCCCAGCAGACGGGGAAACTGT TCATCTTCTTAAAAAGGAAATAAACTTCTACAGTTGAGTCTGAA
hide sequence
RefSeq Acc Id:
XM_017600572 ⟹ XP_017456061
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,859,509 (-) NCBI mRatBN7.2 17 77,912,374 - 77,950,893 (-) NCBI Rnor_6.0 17 82,020,316 - 82,060,533 (-) NCBI
Sequence:
TGGCTCAATAGTTAAGGGCACTTGCATAGTGCCCAGGTTCCATTGTCAGCACCCATATGATAGC TTACAACCAGAATGTCAGTTCCAGGGCATCAAACAGGCAAGCACGTGGTGCACGTGTATGCATGCAGACAAAACATTCATATTCTTAACATAAATACGTCTTTGAAGTAAAAGTGTCCGAGGGAGGCC TCCGTCGCTACTTGCACTGAGGACAATAAATGGAAACCTCCCTGATTCAGATTAGTGAGGTAGCCAGCTCAAATTAGCATTCAAGAGGCTCGGAGAACCTGCTTCCACTAGGCAGGGAAGAAGCACCA CCTTCAGGGGGCAGGACTGGAAGTGATTGGCAGATGCAGGGTGGGCAGCCGGCGCCGGAAGTGACGAAACGACTTTGGAAGTGACGAGGAAGCGACTTTGTGTTCCGAAGCTGGGGCGCGGTTTTGGA AAATAGTGTGTGGGAGTGGACGTGCTGTTTTCCTATCTGCACTTAGGTACACTTGTTACCAAGCCGCGTTTGGCGCAGTGTCGCAGTTCGGAGCTTTCTCACGGCATCCCCGAGAAGGACAAACCTTG GGCCCCGCTCACTCCAGAACTCAACCCCGAAAGGCATTCTTGTGCTCGTCCATTGGCTGACAACGCTGTAATTCGGAAAGAAAGAAAAAGACTGCTTTCCAACATTTTCTTGGACAATTACAGCAGAA AAAAAGAATGTATGTATTTCCAAAGATATCTTTGAGACCTGAAGTTGAAAACTATCTCAAAGAGAGCTTTTTGAACGAGGAGGTTGTGTCTGCTTCGAGCCAACAGGAAGCAGAAAGGAACTTTGAGA CTCTGCTGCTTCGCCTGTCACACCCTCCGTTGTTCACGACTGTCAGAGTGAATACGCATTTAGGCTCAGTTGAGCATGTCAGAGGTCTGCTGCTTGAAGAGCTTCAGAAGCAGTTTGGTGGATCCAGC ATTCCCGTTCTTCAGCATCCAGCCCTCCCGGATGTTCTACTCATCCCCATGACTGGACCAAGGGGTATAGGCATAAGAATGACAGAACCCATATATCTCAGTCCCTCATTTGACAATGTTCTATCTGG TTATATATTTTTACAGAATTTGCCATCTACGGTTGTAGCTCATGTTCTTGATCCTCAACCTGGAGAGAAGATTCTAGATTTGTGTGCAGCACCAGGGGGCAAAACTACACACATTGCAGCACTGATGC GCGACCAGGGAGAAGTAATAGCATTGGACAAAATACTGACTAAAGTGACAAAATTAAAGCAGAATGCTTCATTATTAGGACTGCATTCTATCCGGGCGTTTTGCTTTGATGCAACAAAGGCTCTTAAG CTGGAGGTGATGGACGGCGTAGACGGGGCACCTCCATTCTTACCAGAATCTTTTGACCGAATTCTCCTTGACGCGCCCTGCAGTGGACTGGGACAGAGGCCAAATATGGCTTGCACTTGGACTTTGAA GGAAGTGACATCCTATCAGCCACTGCAGCGAAAACTCCTTAATGTGGCGGTTCGACTCCTGAAGCCAGGGGGTGTGCTGGTCTACAGCACGTGCACAGTAACTCTGGCAGAAAACGAAGAGCAAGTCG CCTGGGCCCTCAGAACATTCCCCTGCCTTCAACTTCAACCCCAGGAACCACAGATCGGAGGAGAAGGGATGCTGGGAGCTGGCCTGTCACTGGAGCAGCTGAAACAGCTGCAGCGCTTTGACCCGTGT GTTGTGCCTCTGGAGAGCATGGACACGAACTCTCTTGGAGATGCCAGAAGGGAAGACGTGATTTGGCTAGCCAACAAGGATTGTATAGGCTTCTTTATTGCAAAGTTTCTAAAATGTCAAAGCACAGA AAGGAAGGTTTCTCGGAAATGAAAATCCTGAATGCTGTCTGCGTGGTGCTGTTTCTTACACCAAAATGTTGTCAAGCCAACGGAGTGATGGCACGGTTGCTCAGGAAACAGGATATGCTAGCAGTTCC CCGGATTAGAAGGGGCAGTGTGTATATGTGGCCCTGGGAAAGTGAGGGCTAGTAAAGCAAAATCAGCCTCATGTTTCCTGAAAGGGAAGGAGGAGTCGCCTGGGGTCTGGAGCACACTTTCAGCACTA ACTCATCAGTATTAGTCTTTCTAATGTGAAAAAATAGTTTAAAAACAAAAGAATAAACCTCTAAACCTTCCAAGTGGTCATGTAAAGCTGTTTTCTGTTTCCAAGACAGTGGTGGTTTCTTCAGTCAG TTTTCAGGACATGGGCAGTAATACTGACCTCGTCATGACTGAGGCTTCCCGTAGGAAGGTCTCTCAACGACTTACCGTATCCATCCTGACTGCAGCAGCTCTTGGATCAGGTAAAGCCTTTGGGTGGC TTCTTCCTGGAGAAAATCTCTTTTGAACAGCCCTGAGCTCTCTACATCCAAGTGCCTGTACCCAAGTGTATGTCCCAGCACATTGTGACGCCAGTGGACTGTTAGCTTGAGCTTCACTCCTGCACCTG GGAAATGGACCAGGACAGATAAACGAGCCTCCCCTTTCTCATATCACTGCTTCAGAGTAGGTAGTCAGTGGTATTATGGAATATGAAAAGTTCTCTTGAATTTCCCAAGATTCAAGTATATAAGCAAG CCTTTTCTATCTTTCATTCTGCCTGTGTCCAGGAGATTTTGACTGAAGAGAAACACCATCTCCTTGAGGCACTTCTGATTCTGGGAATTCAGGTAGCCCCCCCCCTTTTTTAAATGTATTTTAAGCAA CTCTATAATCATGGTTTCCTTTCTTGCTCTCTGCACATCTGTATGTGATAAGCTAGGGTGAGAGTGGGAGAGGAACAGCCAAGCAGCAAACCTGCCAGACTTTTTACCCATTCTAGTAAATACCAGCG TGCACACGGAGCCAGCAAAAGAAAACTGCGTGTGTTCAGAACAGCAAGGATAGGGAATGCTGTTAACAGTTTCCTGTTTAAACTAAGCCATTCTCAGTGGATTGCTTCCTTTCAAACTTGAAAGAAAT CCACATATTCTTCAGCATATCTTTTAGCATACTTAGTTTTAATATAGATTATTTCTATGAAAACAGGAAAAAAAAGCATTTATTTGGTAAAAAAAATACATTTTAATTAAAACCCTATGTTAGATTTT AGTTTATATAGCAAAGTGAAGTAAAACAGATAATAAGGCCCAGAGTCAGCAATATGACACTTACTGGATAAGACCAGAAGATCAAGGAGAAACGGAGTCGTGTCCCCAGCAGACGGGGAAACTGTTCA TCTTCTTAAAAAGGAAATAAACTTCTACAGTTGAGTCTGAA
hide sequence
RefSeq Acc Id:
XM_039095798 ⟹ XP_038951726
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,859,509 (-) NCBI mRatBN7.2 17 77,912,374 - 77,950,895 (-) NCBI
RefSeq Acc Id:
XM_039095802 ⟹ XP_038951730
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,847,508 (-) NCBI mRatBN7.2 17 77,912,374 - 77,950,886 (-) NCBI
RefSeq Acc Id:
XM_039095804 ⟹ XP_038951732
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,828,488 - 82,859,509 (-) NCBI mRatBN7.2 17 77,919,924 - 77,950,907 (-) NCBI
RefSeq Acc Id:
XM_063276497 ⟹ XP_063132567
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,864,140 (-) NCBI
RefSeq Acc Id:
XM_063276498 ⟹ XP_063132568
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,864,140 (-) NCBI
RefSeq Acc Id:
XM_063276499 ⟹ XP_063132569
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 82,820,938 - 82,859,509 (-) NCBI
RefSeq Acc Id:
NP_001100837 ⟸ NM_001107367
- UniProtKB:
B1WC69 (UniProtKB/TrEMBL), F7ENF9 (UniProtKB/TrEMBL)
- Sequence:
MYVFPKISLRPEVENYLKESFLNEEVVSASSQQEAERNFETLLLRLSHPPLFTTVRVNTHLGSVEHVRGLLLEELQKQFGGSSIPVLQHPALPDVLLIPMTGPRKNIERQQCEVIVGAQCGNAVLRGA HVYVPGVVSASKFMKAGDVVSVYSDIKGKCKKGAKEFDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLSGYIFLQNLPSTVVAHVLDPQPGEKILDLCAAPGGKTTHIAALM RDQGEVIALDKILTKVTKLKQNASLLGLHSIRAFCFDATKALKLEVMDGVDGAPPFLPESFDRILLDAPCSGLGQRPNMACTWTLKEVTSYQPLQRKLLNVAVRLLKPGGVLVYSTCTVTLAENEEQV AWALRTFPCLQLQPQEPQIGGEGMLGAGLSLEQLKQLQRFDPCVVPLESMDTNSLGDARREDVIWLANKDCIGFFIAKFLKCQSTERKVSRK
hide sequence
RefSeq Acc Id:
XP_008770091 ⟸ XM_008771869
- Peptide Label:
isoform X1
- Sequence:
MYVFPKISLRPEVENYLKESFLNEEVVSASSQQEAERNFETLLLRLSHPPLFTTVRVNTHLGSVEHVRGLLLEELQKFGGSSIPVLQHPALPDVLLIPMTGPRKNIERQQCEVIVGAQCGNAVLRGAH VYVPGVVSASKFMKAGDVVSVYSDIKGKCKKGAKEFDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLSGYIFLQNLPSTVVAHVLDPQPGEKILDLCAAPGGKTTHIAALMR DQGEVIALDKILTKVTKLKQNASLLGLHSIRAFCFDATKALKLEVMDGVDGAPPFLPESFDRILLDAPCSGLGQRPNMACTWTLKEVTSYQPLQRKLLNVAVRLLKPGGVLVYSTCTVTLAENEEQVA WALRTFPCLQLQPQEPQIGGEGMLGAGLSLEQLKQLQRFDPCVVPLESMDTNSLGDARREDVIWLANKDCIGFFIAKFLKCQSTERKVSRK
hide sequence
RefSeq Acc Id:
XP_017456061 ⟸ XM_017600572
- Peptide Label:
isoform X2
- Sequence:
MYVFPKISLRPEVENYLKESFLNEEVVSASSQQEAERNFETLLLRLSHPPLFTTVRVNTHLGSVEHVRGLLLEELQKQFGGSSIPVLQHPALPDVLLIPMTGPRGIGIRMTEPIYLSPSFDNVLSGYI FLQNLPSTVVAHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKILTKVTKLKQNASLLGLHSIRAFCFDATKALKLEVMDGVDGAPPFLPESFDRILLDAPCSGLGQRPNMACTWTLKEV TSYQPLQRKLLNVAVRLLKPGGVLVYSTCTVTLAENEEQVAWALRTFPCLQLQPQEPQIGGEGMLGAGLSLEQLKQLQRFDPCVVPLESMDTNSLGDARREDVIWLANKDCIGFFIAKFLKCQSTERK VSRK
hide sequence
Ensembl Acc Id:
ENSRNOP00000025046 ⟸ ENSRNOT00000025046
RefSeq Acc Id:
XP_038951726 ⟸ XM_039095798
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038951730 ⟸ XM_039095802
- Peptide Label:
isoform X5
RefSeq Acc Id:
XP_038951732 ⟸ XM_039095804
- Peptide Label:
isoform X7
Ensembl Acc Id:
ENSRNOP00000094478 ⟸ ENSRNOT00000102323
RefSeq Acc Id:
XP_063132567 ⟸ XM_063276497
- Peptide Label:
isoform X4
RefSeq Acc Id:
XP_063132568 ⟸ XM_063276498
- Peptide Label:
isoform X4
RefSeq Acc Id:
XP_063132569 ⟸ XM_063276499
- Peptide Label:
isoform X6
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2019-04-04
Nsun6
NOP2/Sun RNA methyltransferase 6
Nsun6
NOP2/Sun RNA methyltransferase family member 6
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2015-11-30
Nsun6
NOP2/Sun RNA methyltransferase family member 6
Nsun6
NOP2/Sun domain family, member 6
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2011-08-02
Nsun6
NOP2/Sun domain family, member 6
Nsun6
NOL1/NOP2/Sun domain family, member 6
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-03-06
Nsun6
NOL1/NOP2/Sun domain family, member 6
Nsun6_predicted
NOL1/NOP2/Sun domain family, member 6 (predicted)
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2006-03-30
Nsun6_predicted
NOL1/NOP2/Sun domain family, member 6 (predicted)
Nopd1_predicted
nucleolar protein (NOL1/NOP2/sun) and PUA domains 1 (predicted)
Symbol and Name updated
1299863
APPROVED
2005-01-12
Nopd1_predicted
nucleolar protein (NOL1/NOP2/sun) and PUA domains 1 (predicted)
Symbol and Name status set to approved
70820
APPROVED