Slc35d2 (solute carrier family 35 member D2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Slc35d2 (solute carrier family 35 member D2) Rattus norvegicus
Analyze
Symbol: Slc35d2
Name: solute carrier family 35 member D2
RGD ID: 1309518
Description: Predicted to enable antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to be involved in nucleotide-sugar transmembrane transport. Predicted to act upstream of with a positive effect on heparan sulfate proteoglycan biosynthetic process. Predicted to be active in Golgi membrane. Orthologous to human SLC35D2 (solute carrier family 35 member D2); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC290959; nucleotide sugar transporter SLC35D2; solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2; solute carrier family 35, member D2; UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr817992,153 - 1,025,476 (+)NCBIGRCr8
mRatBN7.217987,899 - 1,019,747 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl17988,157 - 1,019,743 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx171,006,865 - 1,037,986 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0172,549,439 - 2,580,556 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0171,004,285 - 1,035,404 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0171,618,641 - 1,649,734 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,618,189 - 1,648,973 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0171,607,754 - 1,638,846 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4176,515,164 - 6,546,280 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1176,514,746 - 6,546,191 (+)NCBI
Celera171,497,904 - 1,529,023 (-)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Slc35d2Ratintellectual disability  ISOSLC35D2 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

1 to 20 of 66 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Slc35d2Rat(-)-epigallocatechin 3-gallate multiple interactionsISOSLC35D2 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of SLC35D2 mRNACTDPMID:22079256
Slc35d2Rat(1->4)-beta-D-glucan multiple interactionsISOSlc35d2 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of SLC35D2 mRNACTDPMID:36331819
Slc35d2Rat1,2-dimethylhydrazine decreases expressionISOSlc35d2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of SLC35D2 mRNACTDPMID:22206623
Slc35d2Rat17beta-estradiol multiple interactionsEXP 6480464[bisphenol A co-treated with Estradiol] results in increased expression of SLC35D2 mRNACTDPMID:26496021
Slc35d2Rat17beta-estradiol affects expressionISOSlc35d2 (Mus musculus)6480464Estradiol affects the expression of SLC35D2 mRNACTDPMID:39298647
Slc35d2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOSlc35d2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of SLC35D2 mRNACTDPMID:26290441
Slc35d2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of SLC35D2 mRNACTDPMID:33387578
Slc35d2Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of SLC35D2 mRNACTDPMID:21346803
Slc35d2Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of SLC35D2 mRNACTDPMID:21346803
Slc35d2Rat2-methylcholine affects expressionISOSLC35D2 (Homo sapiens)6480464beta-methylcholine affects the expression of SLC35D2 mRNACTDPMID:21179406
Slc35d2Rat3-iodothyronamine affects uptakeISOSLC35D2 (Homo sapiens)6480464SLC35D2 mRNA affects the uptake of 3-iodothyronamineCTDPMID:19074582
Slc35d2Rat3-phenylprop-2-enal decreases expressionISOSLC35D2 (Homo sapiens)6480464cinnamaldehyde results in decreased expression of SLC35D2 mRNACTDPMID:17178418
Slc35d2Rat4,4'-sulfonyldiphenol affects expressionISOSlc35d2 (Mus musculus)6480464bisphenol S affects the expression of SLC35D2 mRNACTDPMID:39298647
Slc35d2Rat4,4'-sulfonyldiphenol multiple interactionsISOSLC35D2 (Homo sapiens)6480464[bisphenol S co-treated with Fulvestrant] results in increased methylation of SLC35D2 geneCTDPMID:31601247
Slc35d2Rat6-propyl-2-thiouracil affects expressionEXP 6480464Propylthiouracil affects the expression of SLC35D2 mRNACTDPMID:24780913
Slc35d2Rataflatoxin B1 affects expressionISOSLC35D2 (Homo sapiens)6480464Aflatoxin B1 affects the expression of SLC35D2 proteinCTDPMID:20106945
Slc35d2RatAflatoxin B2 alpha decreases methylationISOSLC35D2 (Homo sapiens)6480464aflatoxin B2 results in decreased methylation of SLC35D2 intronCTDPMID:30157460
Slc35d2RatAzoxymethane multiple interactionsISOSlc35d2 (Mus musculus)6480464[titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in increased expression of SLC35D2 mRNACTDPMID:29950665
Slc35d2Ratbenzo[a]pyrene increases expressionISOSlc35d2 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of SLC35D2 mRNACTDPMID:21715664
Slc35d2Ratbenzo[a]pyrene decreases expressionISOSLC35D2 (Homo sapiens)6480464Benzo(a)pyrene results in decreased expression of SLC35D2 mRNACTDPMID:32234424

1 to 20 of 66 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Slc35d2Ratheparan sulfate proteoglycan biosynthetic process acts_upstream_of_positive_effectISOSLC35D2 (Homo sapiens)1624291 PMID:15082721RGDPMID:15082721
Slc35d2Ratheparan sulfate proteoglycan biosynthetic process acts_upstream_of_positive_effectIEAUniProtKB:Q76EJ3 and ensembl:ENSP000002532701600115GO_REF:0000107EnsemblGO_REF:0000107
Slc35d2Ratnucleotide-sugar transmembrane transport involved_inIBAFB:FBgn0042641 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Slc35d2RatUDP-glucuronate transmembrane transport involved_inIEAGO:00054611600115GO_REF:0000108GOCGO_REF:0000108
Slc35d2RatUDP-N-acetylgalactosamine transmembrane transport involved_inIEAGO:00054631600115GO_REF:0000108GOCGO_REF:0000108
Slc35d2RatUDP-N-acetylglucosamine transmembrane transport involved_inIEAGO:00054621600115GO_REF:0000108GOCGO_REF:0000108

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Slc35d2RatGolgi apparatus located_inISOSLC35D2 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Slc35d2RatGolgi apparatus is_active_inIBACGD:CAL0000182900 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Slc35d2RatGolgi apparatus located_inIEAUniProtKB:Q76EJ3 and ensembl:ENSP000002532701600115GO_REF:0000107EnsemblGO_REF:0000107
Slc35d2RatGolgi membrane is_active_inISOSLC35D2 (Homo sapiens)1624291 PMID:15082721RGDPMID:15082721
Slc35d2RatGolgi membrane is_active_inIEAUniProtKB:Q76EJ3 and ensembl:ENSP000002532701600115GO_REF:0000107EnsemblGO_REF:0000107
Slc35d2Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Slc35d2Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


Slc35d2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr817992,153 - 1,025,476 (+)NCBIGRCr8
mRatBN7.217987,899 - 1,019,747 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl17988,157 - 1,019,743 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx171,006,865 - 1,037,986 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0172,549,439 - 2,580,556 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0171,004,285 - 1,035,404 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0171,618,641 - 1,649,734 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,618,189 - 1,648,973 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0171,607,754 - 1,638,846 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4176,515,164 - 6,546,280 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1176,514,746 - 6,546,191 (+)NCBI
Celera171,497,904 - 1,529,023 (-)NCBICelera
Cytogenetic Map17p14NCBI
SLC35D2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38996,313,444 - 96,383,711 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl996,313,444 - 96,383,711 (-)EnsemblGRCh38hg38GRCh38
GRCh37999,075,726 - 99,145,993 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36998,122,809 - 98,185,758 (-)NCBINCBI36Build 36hg18NCBI36
Build 34996,162,543 - 96,225,492NCBI
Celera969,524,567 - 69,587,574 (-)NCBICelera
Cytogenetic Map9q22.32NCBI
HuRef968,694,273 - 68,756,998 (-)NCBIHuRef
CHM1_1999,229,454 - 99,292,473 (-)NCBICHM1_1
T2T-CHM13v2.09108,485,153 - 108,555,432 (-)NCBIT2T-CHM13v2.0
Slc35d2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391364,244,122 - 64,277,195 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1364,244,122 - 64,277,182 (-)EnsemblGRCm39 Ensembl
GRCm381364,096,308 - 64,129,381 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1364,096,308 - 64,129,368 (-)EnsemblGRCm38mm10GRCm38
MGSCv371364,197,618 - 64,230,638 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361364,106,787 - 64,138,533 (-)NCBIMGSCv36mm8
MGSCv361362,922,313 - 62,954,131 (-)NCBIMGSCv36mm8
Celera1365,760,015 - 65,793,359 (-)NCBICelera
Cytogenetic Map13B3NCBI
cM Map1333.26NCBI
Slc35d2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542223,517,185 - 23,586,694 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542223,544,376 - 23,582,585 (+)NCBIChiLan1.0ChiLan1.0
SLC35D2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21143,066,359 - 43,129,527 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1943,068,734 - 43,131,905 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0967,411,201 - 67,481,593 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1995,541,092 - 95,603,415 (-)NCBIpanpan1.1PanPan1.1panPan2
SLC35D2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1170,487,597 - 70,536,128 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha171,250,628 - 71,299,126 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0170,788,401 - 70,836,855 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1170,600,053 - 70,648,520 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0170,363,312 - 70,411,789 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0171,074,446 - 71,122,895 (+)NCBIUU_Cfam_GSD_1.0
Slc35d2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049446,065,665 - 6,095,812 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936487282,621 - 321,453 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936487282,136 - 312,249 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC35D2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1025,738,231 - 25,789,518 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11025,738,208 - 25,789,487 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21029,757,361 - 29,778,433 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21029,898,683 - 29,916,032 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC35D2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112106,745,563 - 106,813,003 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12106,745,650 - 106,812,842 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603895,147,258 - 95,207,866 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc35d2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475318,169,193 - 18,234,622 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475318,169,182 - 18,321,202 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Slc35d2
136 total Variants

Predicted Target Of
Summary Value
Count of predictions:105
Count of miRNA genes:89
Interacting mature miRNAs:101
Transcripts:ENSRNOT00000036212
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat

RH132150  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2171,019,003 - 1,019,193 (-)MAPPERmRatBN7.2
Rnor_6.0171,618,752 - 1,618,941NCBIRnor6.0
Rnor_5.0171,608,308 - 1,608,497UniSTSRnor5.0
RGSC_v3.4176,545,980 - 6,546,169UniSTSRGSC3.4
Celera171,498,015 - 1,498,204UniSTS
RH 3.4 Map170.6UniSTS
Cytogenetic Map17p14UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000036212   ⟹   ENSRNOP00000038617
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl17988,157 - 1,019,743 (+)Ensembl
Rnor_6.0 Ensembl171,618,189 - 1,648,973 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000096960   ⟹   ENSRNOP00000078756
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl17988,157 - 1,019,743 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099057   ⟹   ENSRNOP00000091466
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl17988,157 - 1,019,217 (+)Ensembl
RefSeq Acc Id: NM_001106098   ⟹   NP_001099568
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr817993,918 - 1,025,033 (+)NCBI
mRatBN7.217988,183 - 1,019,304 (+)NCBI
Rnor_6.0171,618,641 - 1,648,999 (-)NCBI
Rnor_5.0171,607,754 - 1,638,846 (-)NCBI
RGSC_v3.4176,515,164 - 6,546,280 (+)RGD
Celera171,497,904 - 1,529,023 (-)RGD
Sequence:
RefSeq Acc Id: XM_006253493   ⟹   XP_006253555
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr817992,153 - 1,025,476 (+)NCBI
mRatBN7.217987,899 - 1,019,747 (+)NCBI
Rnor_6.0171,619,116 - 1,649,734 (-)NCBI
Rnor_5.0171,607,754 - 1,638,846 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039095437   ⟹   XP_038951365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr817993,948 - 1,025,476 (+)NCBI
mRatBN7.217988,194 - 1,019,747 (+)NCBI
RefSeq Acc Id: XM_039095438   ⟹   XP_038951366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr817992,153 - 1,014,831 (+)NCBI
mRatBN7.217987,900 - 1,009,099 (+)NCBI
1 to 10 of 10 rows
Protein RefSeqs NP_001099568 (Get FASTA)   NCBI Sequence Viewer  
  XP_006253555 (Get FASTA)   NCBI Sequence Viewer  
  XP_038951365 (Get FASTA)   NCBI Sequence Viewer  
  XP_038951366 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL84426 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000038617
  ENSRNOP00000038617.4
  ENSRNOP00000078756.1
  ENSRNOP00000091466
  ENSRNOP00000091466.1
1 to 10 of 10 rows
RefSeq Acc Id: NP_001099568   ⟸   NM_001106098
- UniProtKB: D4A1T9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006253555   ⟸   XM_006253493
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AC44 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000038617   ⟸   ENSRNOT00000036212
RefSeq Acc Id: XP_038951366   ⟸   XM_039095438
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038951365   ⟸   XM_039095437
- Peptide Label: isoform X2
Sugar phosphate transporter

Name Modeler Protein Id AA Range Protein Structure
AF-D4A1T9-F1-model_v2 AlphaFold D4A1T9 1-326 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13700260
Promoter ID:EPDNEW_R10783
Type:multiple initiation site
Name:Slc35d2_1
Description:solute carrier family 35 member D2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0171,648,975 - 1,649,035EPDNEW


1 to 18 of 18 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-10536 BioCyc
Ensembl Genes ENSRNOG00000027229 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000036212 ENTREZGENE
  ENSRNOT00000036212.7 UniProtKB/TrEMBL
  ENSRNOT00000096960.1 UniProtKB/TrEMBL
  ENSRNOT00000099057 ENTREZGENE
  ENSRNOT00000099057.1 UniProtKB/TrEMBL
InterPro DUF250 UniProtKB/TrEMBL
  TPT_transporter UniProtKB/TrEMBL
KEGG Report rno:290959 UniProtKB/TrEMBL
NCBI Gene 290959 ENTREZGENE
PANTHER SOLUTE CARRIER FAMILY 35 UniProtKB/TrEMBL
Pfam TPT UniProtKB/TrEMBL
PhenoGen Slc35d2 PhenoGen
RatGTEx ENSRNOG00000027229 RatGTEx
UniProt A0A8I5ZLE6_RAT UniProtKB/TrEMBL
  A0A8I6AC44 ENTREZGENE, UniProtKB/TrEMBL
  D4A1T9 ENTREZGENE, UniProtKB/TrEMBL
1 to 18 of 18 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc35d2  solute carrier family 35 member D2  Slc35d2  solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-02 Slc35d2  solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2  Slc35d2  solute carrier family 35, member D2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Slc35d2  solute carrier family 35, member D2   Slc35d2_predicted  solute carrier family 35, member D2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Slc35d2_predicted  solute carrier family 35, member D2 (predicted)      Symbol and Name status set to approved 70820 APPROVED