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Gene: SLC35D2 (solute carrier family 35 member D2) Sus scrofa

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Symbol:

SLC35D2

Name:

solute carrier family 35 member D2

RGD ID:

14213397

Description:

ENCODES a protein that exhibits nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN Golgi membrane (ortholog)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

nucleotide sugar transporter SLC35D2; UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	25,738,231 - 25,789,518 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	25,738,208 - 25,789,487 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	29,757,361 - 29,778,433 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	10	29,898,683 - 29,916,032 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

heparan sulfate proteoglycan biosynthetic process (IEA,ISO)

nucleotide-sugar transmembrane transport (IBA)

UDP-glucuronic acid transmembrane transport (IEA)

UDP-N-acetylgalactosamine transmembrane transport (IEA)

UDP-N-acetylglucosamine transmembrane transport (IEA)

Cellular Component

Golgi apparatus (IBA,IEA)

Golgi membrane (IEA,ISO)

membrane (IEA)

Molecular Function

antiporter activity (IBA)

nucleotide-sugar transmembrane transporter activity (ISO)

UDP-glucuronic acid transmembrane transporter activity (IBA)

UDP-N-acetylgalactosamine transmembrane transporter activity (IBA)

UDP-N-acetylglucosamine transmembrane transporter activity (IBA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

SLC35D2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	25,738,231 - 25,789,518 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	25,738,208 - 25,789,487 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	29,757,361 - 29,778,433 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	10	29,898,683 - 29,916,032 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC35D2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	96,313,444 - 96,383,711 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	96,313,444 - 96,383,711 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	99,075,726 - 99,145,993 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	98,122,809 - 98,185,758 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	96,162,543 - 96,225,492	NCBI
Celera	9	69,524,567 - 69,587,574 (-)	NCBI		Celera
Cytogenetic Map	9	q22.32	NCBI
HuRef	9	68,694,273 - 68,756,998 (-)	NCBI		HuRef
CHM1_1	9	99,229,454 - 99,292,473 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	108,485,153 - 108,555,432 (-)	NCBI		T2T-CHM13v2.0

Slc35d2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	64,244,122 - 64,277,195 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	64,244,122 - 64,277,182 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	64,096,308 - 64,129,381 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	64,096,308 - 64,129,368 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	64,197,618 - 64,230,638 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	64,106,787 - 64,138,533 (-)	NCBI		MGSCv36	mm8
MGSCv36	13	62,922,313 - 62,954,131 (-)	NCBI		MGSCv36	mm8
Celera	13	65,760,015 - 65,793,359 (-)	NCBI		Celera
Cytogenetic Map	13	B3	NCBI
cM Map	13	33.26	NCBI

Slc35d2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	992,153 - 1,025,476 (+)	NCBI		GRCr8
mRatBN7.2	17	987,899 - 1,019,747 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	988,157 - 1,019,743 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	1,006,865 - 1,037,986 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	2,549,439 - 2,580,556 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	1,004,285 - 1,035,404 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	1,618,641 - 1,649,734 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	1,618,189 - 1,648,973 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	1,607,754 - 1,638,846 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	6,515,164 - 6,546,280 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	6,514,746 - 6,546,191 (+)	NCBI
Celera	17	1,497,904 - 1,529,023 (-)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

Slc35d2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	23,517,185 - 23,586,694 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	23,544,376 - 23,582,585 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC35D2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	43,066,359 - 43,129,527 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	43,068,734 - 43,131,905 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	67,411,201 - 67,481,593 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	95,541,092 - 95,603,415 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

SLC35D2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	70,487,597 - 70,536,128 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	71,250,628 - 71,299,126 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	70,788,401 - 70,836,855 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	1	70,600,053 - 70,648,520 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	70,363,312 - 70,411,789 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	71,074,446 - 71,122,895 (+)	NCBI		UU_Cfam_GSD_1.0

Slc35d2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	6,065,665 - 6,095,812 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	282,621 - 321,453 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	282,136 - 312,249 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC35D2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	106,745,563 - 106,813,003 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	106,745,650 - 106,812,842 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	95,147,258 - 95,207,866 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc35d2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	18,169,193 - 18,234,622 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	18,169,182 - 18,321,202 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC35D2
1534 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001244362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021063996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021063997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002336107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK238334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK345137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CF175360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU463873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU914745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01037532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000030779 ⟹ ENSSSCP00000026199

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	25,738,231 - 25,789,518 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000041465 ⟹ ENSSSCP00000039807

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	25,738,257 - 25,789,487 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000045649 ⟹ ENSSSCP00000055043

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	25,738,231 - 25,789,518 (+)	Ensembl

RefSeq Acc Id:

NM_001244362 ⟹ NP_001231291

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	25,738,257 - 25,789,487 (+)	NCBI

Sequence:

show sequence

GTGCGGTGGAGGCTGGCGGCCGCTGGACATGACGGCCGGCGGCCAGGCGGAGGGCTCGGGCGCT
GATCCCGGCTCCGTGGGGCTGCCTTCCCGGGCGGCCAAGCTGCTGTCCGCGCTCTTCTATGGGA
CCTGCTCCTTCCTCCTCGTGCTGGTCAACAAGGCGCTGCTGACCACCTACCGTTTCCCATCGCC
AATTGTTCTTGGAATTGGACAGATGGCAGTTACCATAATGATACTGTATGTGTCCAAGCTAAAT
AAAATAATTCACTTCCCTGATTTTGACAAGAAAATTCCTATAAAGCTGTTTCCTCTGCCTCTTC
TCTACATCGGAAACCACATAAGCGGATTATGGAGCACAAGTAAATTAAGTTCTGACCTTGCTTT
TAACTTGGAAGGCTATATTTTCGTGTTCCTGAATGATCTCTTCACAGCAGCCAATGGAGTTTAT
ACCAAACAGAAAATGGACCCAAAGGAGTTAGGGAAATACGGAGTGCTTTTCTACAATGCTTGCT
TCATGATAATCCCAACTCTTATCCTTAGTATCTCTACTGGAGACCTTCGACAGGCCACTGAATT
CAACCAATGGAAGAATGTTCTATTTATCATACAGTTTCTTCTTTCCTGCTTTTTGGGGTTTCTG
TTGATGTACTCCACAGTTTTGTGCAGCTATTACAATTCAGCCCTGACCACGGCGGTAGTTGGAG
CCATCAAGAATGTGTCCATTGCCTACATTGGGATGTTAGTTGGTGGAGACTACATTTTCTCTGT
GTTAAACTTTGTGGGGTTAAATATTTGCATGGCAGGGGGCTTGAGATATTCCTTTTTAACTCTA
AGCAGCCAGTTAAAACCTAAACAACCTGTGGACGAAGAAAATATCCCTCAAGACTTGAAGGGCT
AGAATGTGGGGCAGAATTGCCAACTGGCTTGCAGACTGGGGGCATGGGGAAGGGTTGCCAGCTG
TTCTGGTTGTGGCTTCCTATGCCCCGCCCCCGGCCCCGCCCCTGGCCCCGCCCCCGTTAGGGCG
CAACAGAAAGGTCTGCAAAATACAGAGACAATCTACCTCATGTGCTGCATAGGGAGCCATCCTG
AGCCCTGAGAAATGCGTCTGGGCGAAGCCTTACCAGCTGAAAGTGTATCTTCTCAAAGAAGCCA
TTGGTGAAAGGGATTGTTTCCAAGGCACTCTGCATGGGCAGAGCCCCGACCACACGTCTGTGCT
GTCGCTGCTGTGACCAGAGTGCTTCAGAGGAGGTAAAAGACTGATACTGTGAGGGTGCTTATCC
GCACCTTGGCCTTAATTTCAAAGGTCCCAGCCAAAGCAGCGTGCCAGTGAGAACATTTTTCCAG
TGTAACCAGACATATCTTTAATACAATCAGCTGCTGAACTGCCAGTAAAGTTGTTAGCTTTGAT
TTGATCCTCTATGTTGATCTTTTCCCAGTCATCAAAGTAAAATAAAAGATAATTTATTGGCATG
CCTCATTCTGTGATAGCATTGTGGACAGTCAGAGAAACAGTATGCCTTAAAGGGTAATACTCCT
TTTAAGACTCAATGTGCAAAATTATGCAATAATTCAATGGA

hide sequence

RefSeq Acc Id:

XM_021063996 ⟹ XP_020919655

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	25,738,208 - 25,789,387 (+)	NCBI

Sequence:

show sequence

TCGGCCGCGGGCCGGGGGTGGGGACGGAACTTGGGCGGGGCGTCCCCAAGTGCGGTGGAGGCTG
GCGGCCGCTGGACATGACGGCCGGCGGCCAGGCGGAGGGCTCGGGCGCTGATCCCGGCTCCGTG
GGGCTGCCTTCCCGGGCGGCCAAGCTGCTGTCCGCGCTCTTCTATGGGACCTGCTCCTTCCTCC
TCGTGCTGGTCAACAAGGCGCTGCTGACCACCTACCGTTTCCCATCGCCAATTGTTCTTGGAAT
TGGACAGATGGCAGTTACCATAATGATACTGTATGTGTCCAAGCTAAATAAAATAATTCACTTC
CCTGATTTTGACAAGAAAATTCCTATAAAGCTGTTTCCTCTGCCTCTTCTCTACATCGGAAACC
ACATAAGCGGATTATGGAGCACAAGTAAATTAAGCTTACCGATGTTCACCGTACTCAGGAAATT
TACCATTCCACTTACTTTACTCCTGGAAACCATCATACTTGGGAAACAGTATTCCTTGAACATC
ATTGTCAGTGTCTTTGCCATCATTCTTGGTGCTGTCATAGCAGCTGGTTCTGACCTTGCTTTTA
ACTTGGAAGGCTATATTTTCGTGTTCCTGAATGATCTCTTCACAGCAGCCAATGGAGTTTATAC
CAAACAGAAAATGGACCCAAAGGAGTTAGGGAAATACGGAGTGCTTTTCTACAATGCTTGCTTC
ATGATAATCCCAACTCTTATCCTTAGTATCTCTACTGGAGACCTTCGACAGGCCACTGAATTCA
ACCAATGGAAGAATGTTCTATTTATCATACAGTTTCTTCTTTCCTGCTTTTTGGGGTTTCTGTT
GATGTACTCCACAGTTTTGTGCAGCTATTACAATTCAGCCCTGACCACGGCGGTAGTTGGAGCC
ATCAAGAATGTGTCCATTGCCTACATTGGGATGTTAGTTGGTGGAGACTACATTTTCTCTGTGT
TAAACTTTGTGGGGTTAAATATTTGCATGGCAGGGGGCTTGAGATATTCCTTTTTAACTCTAAG
CAGCCAGTTAAAACCTAAACAACCTGTGGACGAAGAAAATATCCCTCAAGACTTGAAGGGCTAG
AATGTGGGGCAGAATTGCCAACTGGCTTGCAGACTGGGGGCATGGGGAAGGGTTGCCAGCTGTT
CTGGTTGTGGCTTCCTATGCCCCGCCCCCGGCCCCGCCCCTGGCCCCGCCCCCGTTAGGGCGCA
ACAGAAAGGTCTGCAAAATACAGAGACAATCTACCTCATGTGCTGCATAGGGAGCCATCCTGAG
CCCTGAGAAATGCGTCTGGGCGAAGCCTTACCAGCTGAAAGTGTATCTTCTCAAAGAAGCCATT
GGTGAAAGGGATTGTTTCCAAGGCACTCTGCATGGGCAGAGCCCCGACCACACGTCTGTGCTGT
CGCTGCTGTGACCAGAGTGCTTCAGAGGAGGTAAAAGACTGATACTGTGAGGGTGCTTATCCGC
ACCTTGGCCTTAATTTCAAAGGTCCCAGCCAAAGCAGCGTGCCAGTGAGAACATTTTTCCAGTG
TAACCAGACATATCTTTAATACAATCAGCTGCTGAACTGCCAGTAAAGTTGTTAGCTTTGATTT
GATCCTCTATGTTGATCTTTTCCCAGTCATCAAAGTAAAATAAAAGATAATTTATTGGCATGCC
TCA

hide sequence

RefSeq Acc Id:

XM_021063997 ⟹ XP_020919656

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	25,738,208 - 25,789,387 (+)	NCBI

Sequence:

show sequence

TCGGCCGCGGGCCGGGGGTGGGGACGGAACTTGGGCGGGGCGTCCCCAAGTGCGGTGGAGGCTG
GCGGCCGCTGGACATGACGGCCGGCGGCCAGGCGGAGGGCTCGGGCGCTGATCCCGGCTCCGTG
GGGCTGCCTTCCCGGGCGGCCAAGCTGCTGTCCGCGCTCTTCTATGGGACCTGCTCCTTCCTCC
TCGTGCTGGTCAACAAGGCGCTGCTGACCACCTACCGTTTCCCATCGCCAATTGTTCTTGGAAT
TGGACAGATGGCAGTTACCATAATGATACTGTATGTGTCCAAGCTAAATAAAATAATTCACTTC
CCTGATTTTGACAAGAAAATTCCTATAAAGCTGTTTCCTCTGCCTCTTCTCTACATCGGAAACC
ACATAAGCGGATTATGGAGCACAAGTAAATTAAGGAAACAGTATTCCTTGAACATCATTGTCAG
TGTCTTTGCCATCATTCTTGGTGCTGTCATAGCAGCTGGTTCTGACCTTGCTTTTAACTTGGAA
GGCTATATTTTCGTGTTCCTGAATGATCTCTTCACAGCAGCCAATGGAGTTTATACCAAACAGA
AAATGGACCCAAAGGAGTTAGGGAAATACGGAGTGCTTTTCTACAATGCTTGCTTCATGATAAT
CCCAACTCTTATCCTTAGTATCTCTACTGGAGACCTTCGACAGGCCACTGAATTCAACCAATGG
AAGAATGTTCTATTTATCATACAGTTTCTTCTTTCCTGCTTTTTGGGGTTTCTGTTGATGTACT
CCACAGTTTTGTGCAGCTATTACAATTCAGCCCTGACCACGGCGGTAGTTGGAGCCATCAAGAA
TGTGTCCATTGCCTACATTGGGATGTTAGTTGGTGGAGACTACATTTTCTCTGTGTTAAACTTT
GTGGGGTTAAATATTTGCATGGCAGGGGGCTTGAGATATTCCTTTTTAACTCTAAGCAGCCAGT
TAAAACCTAAACAACCTGTGGACGAAGAAAATATCCCTCAAGACTTGAAGGGCTAGAATGTGGG
GCAGAATTGCCAACTGGCTTGCAGACTGGGGGCATGGGGAAGGGTTGCCAGCTGTTCTGGTTGT
GGCTTCCTATGCCCCGCCCCCGGCCCCGCCCCTGGCCCCGCCCCCGTTAGGGCGCAACAGAAAG
GTCTGCAAAATACAGAGACAATCTACCTCATGTGCTGCATAGGGAGCCATCCTGAGCCCTGAGA
AATGCGTCTGGGCGAAGCCTTACCAGCTGAAAGTGTATCTTCTCAAAGAAGCCATTGGTGAAAG
GGATTGTTTCCAAGGCACTCTGCATGGGCAGAGCCCCGACCACACGTCTGTGCTGTCGCTGCTG
TGACCAGAGTGCTTCAGAGGAGGTAAAAGACTGATACTGTGAGGGTGCTTATCCGCACCTTGGC
CTTAATTTCAAAGGTCCCAGCCAAAGCAGCGTGCCAGTGAGAACATTTTTCCAGTGTAACCAGA
CATATCTTTAATACAATCAGCTGCTGAACTGCCAGTAAAGTTGTTAGCTTTGATTTGATCCTCT
ATGTTGATCTTTTCCCAGTCATCAAAGTAAAATAAAAGATAATTTATTGGCATGCCTCA

hide sequence

RefSeq Acc Id:

XR_002336107

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	25,738,208 - 25,787,519 (+)	NCBI

Sequence:

show sequence

TCGGCCGCGGGCCGGGGGTGGGGACGGAACTTGGGCGGGGCGTCCCCAAGTGCGGTGGAGGCTG
GCGGCCGCTGGACATGACGGCCGGCGGCCAGGCGGAGGGCTCGGGCGCTGATCCCGGCTCCGTG
GGGCTGCCTTCCCGGGCGGCCAAGCTGCTGTCCGCGCTCTTCTATGGGACCTGCTCCTTCCTCC
TCGTGCTGGTCAACAAGGCGCTGCTGACCACCTACCGTTTCCCATCGCCAATTGTTCTTGGAAT
TGGACAGATGGCAGTTACCATAATGATACTGTATGTGTCCAAGCTAAATAAAATAATTCACTTC
CCTGATTTTGACAAGAAAATTCCTATAAAGCTGTTTCCTCTGCCTCTTCTCTACATCGGAAACC
ACATAAGCGGATTATGGAGCACAAGTAAATTAAGCTTACCGATGTTCACCGTACTCAGGAAATT
TACCATTCCACTTACTTTACTCCTGGAAACCATCATACTTGGGAAACAGTATTCCTTGAACATC
ATTGTCAGTGTCTTTGCCATCATTCTTGGTGCTGTCATAGCAGCTGGTTCTGACCTTGCTTTTA
ACTTGGAAGGCTATATTTTCGTGTTCCTGAATGATCTCTTCACAGCAGCCAATGGAGTTTATAC
CAAACAGAAAATGGACCCAAAGGAGTTAGGGAAATACGGAGTGCTTTTCTACAATGCTTGCTTC
ATGATAATCCCAACTCTTATCCTTAGTATCTCTACTGGAGACCTTCGACAGACCCGTCAGAAGG
AGCAGAAAGTAGGCAGAAGAACCCTGGTCTTGAAGCTTTTTGAAAAACAACAACAAAAATCTGA
GTTTGAATCTCACCTTCCCTTTCGCTGGCCACTGAATTCAACCAATGGAAGAATGTTCTATTTA
TCATACAGTTTCTTCTTTCCTGCTTTTTGGGGTTTCTGTTGATGTACTCCACAGTTTTGTGCAG
CTATTACAATTCAGCCCTGACCACGGCGGTAGTTGGAGCCATCAAGAATGTGTCCATTGCCTAC
ATTGGGATGTTAGTTGGTGGAGACTACATTTTCTCTGTGTTAAACTTTGTGG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001231291	(Get FASTA)	NCBI Sequence Viewer
	XP_020919655	(Get FASTA)	NCBI Sequence Viewer
	XP_020919656	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000026199.3
	ENSSSCP00000039807
	ENSSSCP00000039807.1
	ENSSSCP00000055043
	ENSSSCP00000055043.1
	ENSSSCP00025009400.1
	ENSSSCP00025009415.1
	ENSSSCP00030002633.1
	ENSSSCP00030002638.1
	ENSSSCP00035048052.1
	ENSSSCP00035048058.1
	ENSSSCP00040017016.1
	ENSSSCP00040017041.1
	ENSSSCP00045016075.1
	ENSSSCP00045016085.1
	ENSSSCP00050017806.1
	ENSSSCP00050017809.1
	ENSSSCP00050017813.1
	ENSSSCP00050017820.1
	ENSSSCP00050017824.1
	ENSSSCP00055001326.1
	ENSSSCP00055001330.1
	ENSSSCP00060001577.1
	ENSSSCP00060001581.1
	ENSSSCP00065007516.1
	ENSSSCP00065007520.1
	ENSSSCP00065007525.1
	ENSSSCP00065007535.1

RefSeq Acc Id:	XP_020919655 ⟸ XM_021063996
- Peptide Label:	isoform X1
- UniProtKB:	A0A287BFE7 (UniProtKB/TrEMBL), A0A8D0V9B4 (UniProtKB/TrEMBL), A0A8D1E5X1 (UniProtKB/TrEMBL), A0A8D2C035 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAGGQAEGSGADPGSVGLPSRAAKLLSALFYGTCSFLLVLVNKALLTTYRFPSPIVLGIGQMA VTIMILYVSKLNKIIHFPDFDKKIPIKLFPLPLLYIGNHISGLWSTSKLSLPMFTVLRKFTIPL TLLLETIILGKQYSLNIIVSVFAIILGAVIAAGSDLAFNLEGYIFVFLNDLFTAANGVYTKQKM DPKELGKYGVLFYNACFMIIPTLILSISTGDLRQATEFNQWKNVLFIIQFLLSCFLGFLLMYST VLCSYYNSALTTAVVGAIKNVSIAYIGMLVGGDYIFSVLNFVGLNICMAGGLRYSFLTLSSQLK PKQPVDEENIPQDLKG hide sequence

RefSeq Acc Id:	XP_020919656 ⟸ XM_021063997
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1XLG5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTAGGQAEGSGADPGSVGLPSRAAKLLSALFYGTCSFLLVLVNKALLTTYRFPSPIVLGIGQMA VTIMILYVSKLNKIIHFPDFDKKIPIKLFPLPLLYIGNHISGLWSTSKLRKQYSLNIIVSVFAI ILGAVIAAGSDLAFNLEGYIFVFLNDLFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLI LSISTGDLRQATEFNQWKNVLFIIQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSIA YIGMLVGGDYIFSVLNFVGLNICMAGGLRYSFLTLSSQLKPKQPVDEENIPQDLKG hide sequence

RefSeq Acc Id:

NP_001231291 ⟸ NM_001244362

- UniProtKB:

A0A287A785 (UniProtKB/TrEMBL), A0A8D1BV33 (UniProtKB/TrEMBL), A0A8D1SJ27 (UniProtKB/TrEMBL), A0A8D1XKL9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTAGGQAEGSGADPGSVGLPSRAAKLLSALFYGTCSFLLVLVNKALLTTYRFPSPIVLGIGQMA
VTIMILYVSKLNKIIHFPDFDKKIPIKLFPLPLLYIGNHISGLWSTSKLSSDLAFNLEGYIFVF
LNDLFTAANGVYTKQKMDPKELGKYGVLFYNACFMIIPTLILSISTGDLRQATEFNQWKNVLFI
IQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSIAYIGMLVGGDYIFSVLNFVGLNIC
MAGGLRYSFLTLSSQLKPKQPVDEENIPQDLKG

hide sequence

Ensembl Acc Id:

ENSSSCP00000055043 ⟸ ENSSSCT00000045649

Ensembl Acc Id:

ENSSSCP00000026199 ⟸ ENSSSCT00000030779

Ensembl Acc Id:

ENSSSCP00000039807 ⟸ ENSSSCT00000041465

Protein Domains

Sugar phosphate transporter

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000039368	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025016838	UniProtKB/TrEMBL
	ENSSSCG00030004571	UniProtKB/TrEMBL
	ENSSSCG00035080467	UniProtKB/TrEMBL
	ENSSSCG00040030208	UniProtKB/TrEMBL
	ENSSSCG00045013644	UniProtKB/TrEMBL
	ENSSSCG00050032106	UniProtKB/TrEMBL
	ENSSSCG00055000996	UniProtKB/TrEMBL
	ENSSSCG00060003781	UniProtKB/TrEMBL
	ENSSSCG00065013855	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000030779.4	UniProtKB/TrEMBL
	ENSSSCT00000041465	ENTREZGENE
	ENSSSCT00000041465.1	UniProtKB/TrEMBL
	ENSSSCT00000045649	ENTREZGENE
	ENSSSCT00000045649.3	UniProtKB/TrEMBL
	ENSSSCT00025022679.1	UniProtKB/TrEMBL
	ENSSSCT00025022705.1	UniProtKB/TrEMBL
	ENSSSCT00030006111.1	UniProtKB/TrEMBL
	ENSSSCT00030006117.1	UniProtKB/TrEMBL
	ENSSSCT00035110249.1	UniProtKB/TrEMBL
	ENSSSCT00035110256.1	UniProtKB/TrEMBL
	ENSSSCT00040040606.1	UniProtKB/TrEMBL
	ENSSSCT00040040671.1	UniProtKB/TrEMBL
	ENSSSCT00045023295.1	UniProtKB/TrEMBL
	ENSSSCT00045023312.1	UniProtKB/TrEMBL
	ENSSSCT00050043110.1	UniProtKB/TrEMBL
	ENSSSCT00050043122.1	UniProtKB/TrEMBL
	ENSSSCT00050043131.1	UniProtKB/TrEMBL
	ENSSSCT00050043143.1	UniProtKB/TrEMBL
	ENSSSCT00050043150.1	UniProtKB/TrEMBL
	ENSSSCT00055001758.1	UniProtKB/TrEMBL
	ENSSSCT00055001764.1	UniProtKB/TrEMBL
	ENSSSCT00060004685.1	UniProtKB/TrEMBL
	ENSSSCT00060004689.1	UniProtKB/TrEMBL
	ENSSSCT00065018414.1	UniProtKB/TrEMBL
	ENSSSCT00065018420.1	UniProtKB/TrEMBL
	ENSSSCT00065018434.1	UniProtKB/TrEMBL
	ENSSSCT00065018452.1	UniProtKB/TrEMBL
InterPro	Sugar_P_trans_dom	UniProtKB/TrEMBL
	TPT_transporter	UniProtKB/TrEMBL
KEGG Report	ssc:100514312	UniProtKB/TrEMBL
NCBI Gene	SLC35D2	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 35	UniProtKB/TrEMBL
	UDP-N-ACETYLGLUCOSAMINE/UDP-GLUCOSE/GDP-MANNOSE TRANSPORTER	UniProtKB/TrEMBL
Pfam	TPT	UniProtKB/TrEMBL
UniProt	A0A287A785	ENTREZGENE, UniProtKB/TrEMBL
	A0A287BFE7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0V9B4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1BV33	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1D6P5_PIG	UniProtKB/TrEMBL
	A0A8D1E5X1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1HA54_PIG	UniProtKB/TrEMBL
	A0A8D1M319_PIG	UniProtKB/TrEMBL
	A0A8D1M538_PIG	UniProtKB/TrEMBL
	A0A8D1M5S1_PIG	UniProtKB/TrEMBL
	A0A8D1PEI5_PIG	UniProtKB/TrEMBL
	A0A8D1SJ27	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1XKL9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1XLG5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1XLM6_PIG	UniProtKB/TrEMBL
	A0A8D2C035	ENTREZGENE, UniProtKB/TrEMBL
	I3LQ21_PIG	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar