Bltp3a (bridge-like lipid transfer protein family member 3A) - Rat Genome Database

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Gene: Bltp3a (bridge-like lipid transfer protein family member 3A) Chinchilla lanigera
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Symbol: Bltp3a
Name: bridge-like lipid transfer protein family member 3A
RGD ID: 9059283
Description: ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog); systemic lupus erythematosus (ortholog); FOUND IN late endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: UHRF1 binding protein 1; UHRF1-binding protein 1; Uhrf1bp1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554372,875,835 - 2,904,114 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554372,844,544 - 2,905,073 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Bltp3a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554372,875,835 - 2,904,114 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554372,844,544 - 2,905,073 (+)NCBIChiLan1.0ChiLan1.0
BLTP3A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38634,792,083 - 34,877,514 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl634,792,083 - 34,877,514 (+)EnsemblGRCh38hg38GRCh38
GRCh37634,759,860 - 34,845,291 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36634,867,772 - 34,953,269 (+)NCBINCBI36Build 36hg18NCBI36
Build 34634,867,772 - 34,961,095NCBI
Celera636,314,255 - 36,399,721 (+)NCBICelera
Cytogenetic Map6p21.31NCBI
HuRef634,482,565 - 34,568,027 (+)NCBIHuRef
CHM1_1634,761,891 - 34,847,345 (+)NCBICHM1_1
T2T-CHM13v2.0634,614,874 - 34,700,320 (+)NCBIT2T-CHM13v2.0
Bltp3a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391728,075,481 - 28,119,014 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1728,075,415 - 28,119,015 (+)EnsemblGRCm39 Ensembl
GRCm381727,856,507 - 27,900,040 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1727,856,441 - 27,900,041 (+)EnsemblGRCm38mm10GRCm38
MGSCv371727,993,452 - 28,036,985 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361727,583,387 - 27,627,630 (+)NCBIMGSCv36mm8
Celera1728,409,281 - 28,453,282 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1714.59NCBI
Bltp3a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8205,912,033 - 5,956,404 (+)NCBIGRCr8
mRatBN7.2205,910,261 - 5,954,641 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl205,910,260 - 5,952,404 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0207,431,235 - 7,475,515 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl207,431,355 - 7,471,900 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0209,633,259 - 9,677,553 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4206,067,567 - 6,108,468 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1206,067,004 - 6,110,533 (+)NCBI
Celera207,471,148 - 7,515,710 (+)NCBICelera
Cytogenetic Map20p12NCBI
BLTP3A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2549,261,172 - 49,344,867 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1645,129,903 - 45,212,251 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0634,356,919 - 34,439,105 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1635,453,735 - 35,536,405 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl635,453,735 - 35,538,846 (+)Ensemblpanpan1.1panPan2
BLTP3A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1124,027,333 - 4,087,988 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl124,027,455 - 4,089,578 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha124,039,412 - 4,103,264 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0124,360,073 - 4,423,970 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl124,359,752 - 4,425,564 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1124,020,178 - 4,084,147 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0124,101,125 - 4,165,202 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0124,201,231 - 4,265,219 (+)NCBIUU_Cfam_GSD_1.0
Bltp3a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494639,601,705 - 39,674,406 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647624,290,182 - 24,358,337 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647624,273,233 - 24,358,518 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BLTP3A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl730,731,461 - 30,802,735 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1730,731,466 - 30,799,958 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2735,474,824 - 35,540,338 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BLTP3A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11737,241,841 - 37,322,220 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1737,246,908 - 37,321,337 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604434,710,150 - 34,792,452 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bltp3a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475422,476,430 - 22,536,630 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475422,474,951 - 22,536,828 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000025003   ⟹   ENSCLAP00000024763
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554372,875,835 - 2,904,114 (+)Ensembl
RefSeq Acc Id: XM_005390117   ⟹   XP_005390174
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554372,844,544 - 2,905,073 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005390174 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000024763
  ENSCLAP00000024763.1
RefSeq Acc Id: XP_005390174   ⟸   XM_005390117
- UniProtKB: A0A8C2YUR6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000024763   ⟸   ENSCLAT00000025003
Protein Domains
Chorein N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016999 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000025003 ENTREZGENE
  ENSCLAT00000025003.1 UniProtKB/TrEMBL
InterPro UHRF1BP1-like UniProtKB/TrEMBL
  VPS13-like_N UniProtKB/TrEMBL
NCBI Gene Uhrf1bp1 ENTREZGENE
PANTHER PTHR22774 UniProtKB/TrEMBL
  UHRF1-BINDING PROTEIN 1 UniProtKB/TrEMBL
Pfam Chorein_N UniProtKB/TrEMBL
UniProt A0A8C2YUR6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-07 Bltp3a  bridge-like lipid transfer protein family member 3A  Uhrf1bp1  UHRF1 binding protein 1  Symbol and/or name change 5135510 APPROVED