Micall2 (MICAL like 2) - Rat Genome Database

Name: Micall2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Micall2 (MICAL like 2) Chinchilla lanigera

Analyze

Symbol:

Micall2

Name:

MICAL like 2

RGD ID:

9055241

Description:

ENCODES a protein that exhibits actin filament binding (ortholog); actinin binding (ortholog); filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Joubert syndrome 1 (ortholog); FOUND IN actin filament bundle (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

MICAL-like 2; MICAL-like protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MICALL2 (MICAL like 2)	NCBI	Ortholog
Mus musculus (house mouse):	Micall2 (MICAL-like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Micall2 (MICAL-like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MICALL2 (MICAL like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MICALL2 (MICAL like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Micall2 (MICAL like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MICALL2 (MICAL like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MICALL2 (MICAL like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Micall2 (MICAL like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	9,082,795 - 9,105,338 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955460	9,085,695 - 9,105,236 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Joubert syndrome 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (ISO)

actin filament polymerization (ISO)

bicellular tight junction assembly (ISO)

endocytic recycling (ISO)

neuron projection development (ISO)

positive regulation of protein targeting to mitochondrion (ISO)

substrate adhesion-dependent cell spreading (ISO)

Cellular Component

actin filament bundle (ISO)

bicellular tight junction (ISO)

cell-cell junction (ISO)

neuron projection (ISO)

plasma membrane (ISO)

recycling endosome (ISO)

stress fiber (ISO)

Molecular Function

actin filament binding (ISO)

actinin binding (ISO)

filamin binding (ISO)

protein binding (ISO)

small GTPase binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Micall2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	9,082,795 - 9,105,338 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955460	9,085,695 - 9,105,236 (-)	NCBI	ChiLan1.0	ChiLan1.0

MICALL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	1,434,359 - 1,459,470 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	1,428,465 - 1,459,470 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	1,473,995 - 1,499,106 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	1,440,521 - 1,465,635 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	1,440,266 - 1,466,482 (-)	NCBI		Celera
Cytogenetic Map	7	p22.3	NCBI
HuRef	7	1,393,688 - 1,419,846 (-)	NCBI		HuRef
CHM1_1	7	1,473,617 - 1,498,754 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	1,545,546 - 1,571,603 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	1,526,339 - 1,551,457 (-)	NCBI

Micall2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	139,692,447 - 139,722,088 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	139,692,451 - 139,722,091 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	139,706,692 - 139,736,333 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	139,706,696 - 139,736,336 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	140,182,647 - 140,212,287 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	139,959,170 - 139,985,308 (-)	NCBI		MGSCv36	mm8
Celera	5	136,762,065 - 136,791,474 (-)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	78.79	NCBI

Micall2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	20,013,037 - 20,041,795 (+)	NCBI		GRCr8
mRatBN7.2	12	14,899,188 - 14,927,949 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	14,899,157 - 14,927,946 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	12	16,988,013 - 17,016,794 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	16,988,136 - 17,016,791 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	18,978,691 - 19,007,461 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	15,377,780 - 15,406,394 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	15,407,389 - 15,436,327 (+)	NCBI
Celera	12	16,657,936 - 16,686,709 (+)	NCBI		Celera
Cytogenetic Map	12	q11	NCBI

MICALL2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	6,377,649 - 6,409,609 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	54,707,955 - 54,734,301 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	1,676,677 - 1,708,475 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	1,801,765 - 1,827,258 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	1,801,760 - 1,827,258 (-)	Ensembl	panpan1.1		panPan2

MICALL2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	15,503,489 - 15,513,492 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	15,502,998 - 15,513,509 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	16,960,414 - 16,980,708 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	15,618,699 - 15,639,085 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	15,618,542 - 15,639,102 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	15,421,455 - 15,441,769 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	15,348,237 - 15,368,519 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	15,635,286 - 15,655,555 (+)	NCBI		UU_Cfam_GSD_1.0

Micall2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	143,423,476 - 143,445,448 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936754	1,568,097 - 1,586,716 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936754	1,567,815 - 1,586,843 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MICALL2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	951,327 - 971,108 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	951,330 - 971,129 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	1,066,652 - 1,085,750 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MICALL2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	20,143,184 - 20,168,448 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	20,143,422 - 20,168,261 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666090	1,544,198 - 1,570,676 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Micall2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	26,928,449 - 26,946,957 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	26,928,330 - 26,947,671 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005397804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005397806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521258	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01048539	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01276628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000009073 ⟹ ENSCLAP00000008945

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955460	9,082,795 - 9,105,338 (-)	Ensembl

RefSeq Acc Id:

XM_005397804 ⟹ XP_005397861

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955460	9,085,695 - 9,105,235 (-)	NCBI

Sequence:

show sequence

TGGTCCTCCGGGGGCGGGGGCGGCGGCGGCGGCGGTCCCAGGCTCTGTGTCCCGCCGCGCCGGC
CGCACTTCTGGTTTCCGCGGTCGCCGCACTCGGCCCGCGAGCCCGCCGGTGGCAGTGCCTCGTC
TCTCCGCGCGCCCGCCCTCCGTGTTCTTCGGGCTGGACCTGTGTGGGGAGCGCCCCGCGCGCCG
CCGCCCGCATGGCTGCCATCAAGGCGCTGCAGCAGTGGTGCCGGCAGCAGTGCGAGGGTTACCG
GGACGTGGACATCACCAACATGACAACCTCGTTCCGCGACGGCCTGGCCTTCTGCGCTATCCTG
CACCGCCACCGGCCTGATCTCATAAACTACAGTGCCCTCCGGAAGGAAAACATTTACGAGAACA
ACAAACTTGCCTTCAGTGTGGCTGAGGAGCAGCTGGGCATCCCTGCCCTGCTGGATGCCGAGGA
TATGGTGGCCCTGAAGGTGCCGGACCGGCTGAGCATCCTGACCTATGTGTCGCAGTACTACAAC
TACTTCCACGGCCGCTCCCCCATTGGGGGCATGGCTGGCATAAAGAGGCCCCCGTCGGACCCCG
AGGAGGCGCCATCTGGGAAGAAAGCCCCGTCCACAACGGCCAAGCTGCCCTCACCCGCCCCGGC
CCAGGCGCTACCAATGTCTGCAGCCAGGACAAGCTCTGTGGTTCCGAGGACAGACGGGGGCCCT
AAGGCTGGCCAGACGGTGGCGGGCAGTGCAGTCAGCAGCACCTGCGGGGTCTGCGGCAAGCACG
TCCATCTGGTCCAGCGGCACCTGGTTGATGGGCGGCTCTACCACCGCAGCTGCTTCAGGTGTAA
GCAGTGCTCCAGCACGCTGCGCTCCGGGGCCTACCGGGCCGCTGGGGAGCCGGGCACCTTTGTC
TGCACCAACCATCACTCCAAAGCCAGCTTGGCGAACGCCACATCACCGGCCCTGGCTTCCAAAC
AGCCAGGGGCCACTCCTGTGGAGCCAGGGGCCCCCAGCGTCCTGCGGAAGGCCCAGGAGATGAA
TGGGCAGGGAGAGGCAGCGCCGAAGGCCCAGCAAGCAGCCCAGCAGCCTGCAGTGGGCAATACG
ACCACAAGAGGCTTTGCTCGGACTCCATCTGAGCCCCCACCCTCCACCCTTCCTGTCCACGTGG
GGAGCCCGGCAGGGTCCAGGCTGCCTGCGGGCCCAGTGGCCTCCCGCCTGGAGCACAGCACAGC
CGGCACGCGTGTGACCAATAGCACCCCAGTGGGGTGGACATCATCTGCTCAGGGTCCAGTGACG
AACAGCTCTCGGTCTACCCTTAGTGTCCCAGAGCCTTCCTCAGCCATGCTTCAAGGCCGCGGGG
CATCCCGAGTATCAGCTGCTGTGACCAAGCTCAGCTCGAACTCAGCTTCTTCGGGTGCAGTGGA
CCCCCCAGCCTGGACCCCCTCGGCCACTAGGACCCAGCAGGCCCGGGAGAGGTTCTTCCAGAGC
CCAGCTGCCCCCAGCAGTGGCCCTGTGGGCCAGACCCGCACCTCAGCCAACACCCCCTCCCAGG
ACAGTAGCAGGGAGCAGGCACGGAGCTTTATCAAGAAGGCCCTCTCGGGGGTGGAGGCGGCTGG
CGCCCAGGCGCCTGGCAGGTCCTCCCCCGCTGTGAATTCCTGTCCTAAAACCGAAGGTCCAAAA
GCAGTTCCCTCAGGCAAGCCATCGCAGCCAGACGCTCCCCGCACCCTCAGCTCCACTTCGAGGA
TGGCGCCGTCTGCCCCGAGTGTGGGCAACACCTCACAGGCATCTGGGTCATCCCAGGTGGGCAA
GGGCTCGGCCGTGTCCTCACAGGTCAGCAGGGCAGGGACAGACTCCAGGCTGAAGCCAGAGGCC
CCGACGGCAAAAGGTCCAAGCACCAGCCCCCAGCAAAGCCAAGAGGATGGGCCAGAAGGATGGA
GGGCCCGCCTGAAGCCTGTGGATAAGAAGCCGCCCGCTGGGAGGGCAAAGGAGCTGAAGGAGCC
ACGGGTCCCGGCAGAGCCAAAGGCTGGAGATGCCCCAGCGGCCCCCAGGACCTCTGTGCAGGCC
TCAGGCGGCCTCCAGGGGGGCGTTCGGATCACCCTGACCCACGTACAGCCAGAGCAGACACCGG
GCCACCCTGGCCCAGGAACCAGGCTCCCAGCTGCCTCCCCCTCCTCATCCCCCCGCAGGAGACT
GGCCGTCCCTCCCAGCCTCGATGTGTCTGCCGATTGGCTTCAGTCGGAGCCGTCAGGGCAGGAA
GCCGAAGCCCAGAGCCGGAAGCAGAAGCCTCATTCTCAGGACAAACCAGGGAGGCCCTCGGGCC
TGGCCAGCGTCCCCGCCTCGCCCGAGAAGACCATGTGCTCTCCTGTCAGGCTGCACCCCGACTA
TGTCCCCCAAGAGGAGATTGAGAGGCAGCTGCAGGACATCGAGAGGCAGCTGGACGCGCTGGAG
CACAGGGGTGTCGCGCTGGAGCAGCAGCTGCGTGCGGCCGATGGGGCTGCCGAGGAGGACGACC
TCATGGTGGCCTGGTTCCGGCTTGTCCACGAGAAGCAGCTGCTGCTGAGGCTGGAGTCCGAGCT
GATGTACAAGTCCAAGACCCAGCGCCTGGAGGAGCGGCAGCTGGACCTGGAGGGCGAGCTCCGC
AGGCTGATGGCCAAGCCTGAGGGTCTGAAGTCCCCCCAGGACCGGCGGCGAGAGCAGGAGCTGC
TGAGCCAGTATGTGAGCACTGTGAATGACCGCAGTGACATTGTGGACATCCTGGACGAGGACCG
ACTCAGGGAGAAAGAGGAGGACCAGGTGCTGCAGGACATGATCCAGAGGCTGGACCTGCAAAAG
AAAAAGTCCAAGTTCCGCTTGTCCAAGATCTGGGGCCAGAAGAGCAAAAGCAGTCATGCGGAGT
GAGCTCTCCGCCGGTGCCGCAGGACCTGCACAGCGCCCTGCCCGTCTGCGCCTCCACTGCTCCC
TCCCTGGGGTCTTCTTGGCCCCAATAAACAGACTGGCGATGCCTA

hide sequence

RefSeq Acc Id:

XM_005397806 ⟹ XP_005397863

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955460	9,087,607 - 9,105,236 (-)	NCBI

Sequence:

show sequence

GTGGTCCTCCGGGGGCGGGGGCGGCGGCGGCGGCGGTCCCAGGCTCTGTGTCCCGCCGCGCCGG
CCGCACTTCTGGTTTCCGCGGTCGCCGCACTCGGCCCGCGAGCCCGCCGGTGGCAGTGCCTCGT
CTCTCCGCGCGCCCGCCCTCCGTGTTCTTCGGGCTGGACCTGTGTGGGGAGCGCCCCGCGCGCC
GCCGCCCGCATGGCTGCCATCAAGGCGCTGCAGCAGTGGTGCCGGCAGCAGTGCGAGGGTTACC
GGGACGTGGACATCACCAACATGACAACCTCGTTCCGCGACGGCCTGGCCTTCTGCGCTATCCT
GCACCGCCACCGGCCTGATCTCATAAACTACAGTGCCCTCCGGAAGGAAAACATTTACGAGAAC
AACAAACTTGCCTTCAGTGTGGCTGAGGAGCAGCTGGGCATCCCTGCCCTGCTGGATGCCGAGG
ATATGGTGGCCCTGAAGGTGCCGGACCGGCTGAGCATCCTGACCTATGTGTCGCAGTACTACAA
CTACTTCCACGGCCGCTCCCCCATTGGGGGCATGGCTGGCATAAAGAGGCCCCCGTCGGACCCC
GAGGAGGCGCCATCTGGGAAGAAAGCCCCGTCCACAACGGCCAAGCTGCCCTCACCCGCCCCGG
CCCAGGCGCTACCAATGTCTGCAGCCAGGACAAGCTCTGTGGTTCCGAGGACAGACGGGGGCCC
TAAGGCTGGCCAGACGGTGGCGGGCAGTGCAGTCAGCAGCACCTGCGGGGTCTGCGGCAAGCAC
GTCCATCTGGTCCAGCGGCACCTGGTTGATGGGCGGCTCTACCACCGCAGCTGCTTCAGGTGTA
AGCAGTGCTCCAGCACGCTGCGCTCCGGGGCCTACCGGGCCGCTGGGGAGCCGGGCACCTTTGT
CTGCACCAACCATCACTCCAAAGCCAGCTTGGCGAACGCCACATCACCGGCCCTGGCTTCCAAA
CAGCCAGGGGCCACTCCTGTGGAGCCAGGGGCCCCCAGCGTCCTGCGGAAGGCCCAGGAGATGA
ATGGGCAGGGAGAGGCAGCGCCGAAGGCCCAGCAAGCAGCCCAGCAGCCTGCAGTGGGCAATAC
GACCACAAGAGGCTTTGCTCGGACTCCATCTGAGCCCCCACCCTCCACCCTTCCTGTCCACGTG
GGGAGCCCGGCAGGGTCCAGGCTGCCTGCGGGCCCAGTGGCCTCCCGCCTGGAGCACAGCACAG
CCGGCACGCGTGTGACCAATAGCACCCCAGTGGGGTGGACATCATCTGCTCAGGGTCCAGTGAC
GAACAGCTCTCGGTCTACCCTTAGTGTCCCAGAGCCTTCCTCAGCCATGCTTCAAGGCCGCGGG
GCATCCCGAGTATCAGCTGCTGTGACCAAGCTCAGCTCGAACTCAGCTTCTTCGGGTGCAGTGG
ACCCCCCAGCCTGGACCCCCTCGGCCACTAGGACCCAGCAGGCCCGGGAGAGGTTCTTCCAGAG
CCCAGCTGCCCCCAGCAGTGGCCCTGTGGGCCAGACCCGCACCTCAGCCAACACCCCCTCCCAG
GACAGTAGCAGGGAGCAGGCACGGAGCTTTATCAAGAAGGCCCTCTCGGGGGTGGAGGCGGCTG
GCGCCCAGGCGCCTGGCAGGTCCTCCCCCGCTGTGAATTCCTGTCCTAAAACCGAAGGTCCAAA
AGCAGTTCCCTCAGGCAAGCCATCGCAGCCAGACGCTCCCCGCACCCTCAGCTCCACTTCGAGG
ATGGCGCCGTCTGCCCCGAGTGTGGGCAACACCTCACAGGCATCTGGGTCATCCCAGGTGGGCA
AGGGCTCGGCCGTGTCCTCACAGGTCAGCAGGGCAGGGACAGACTCCAGGCTGAAGCCAGAGGC
CCCGACGGCAAAAGGTCCAAGCACCAGCCCCCAGCAAAGCCAAGAGGATGGGCCAGAAGGATGG
AGGGCCCGCCTGAAGCCTGTGGATAAGAAGCCGCCCGCTGGGAGGGCAAAGGAGCTGAAGGAGC
CACGGGTCCCGGCAGAGCCAAAGGCTGGAGATGCCCCAGCGGCCCCCAGGACCTCTGTGCAGGC
CTCAGGCGGCCTCCAGGGGGGCGTTCGGATCACCCTGACCCACGTACAGCCAGAGCAGACACCG
GGCCACCCTGGCCCAGGAACCAGGCTCCCAGGAGACTGGCCGTCCCTCCCAGCCTCGATGTGTC
TGCCGATTGGCTTCAGTCGGAGCCGTCAGGGCAGGAAGCCGAAGCCCAGAGCCGGAAGCAGAAG
CCTCATTCTCAGGACAAACCAGGGAGGCCCTCGGGCCTGGCCAGCGTCCCCGCCTCGCCCGAGA
AGACCATGTGCTCTCCTGTCAGGCTGCACCCCGACTATGTCCCCCAAGAGGAGATTGAGAGGCA
GCTGCAGGACATCGAGAGGCAGCTGGACGCGCTGGAGCACAGGGGTGTCGCGCTGGAGCAGCAG
CTGCGTGCGGCCGATGGGGCTGCCGAGGAGGACGACCTCATGGTGGCCTGGTTCCGGCTTGTCC
ACGAGAAGCAGCTGCTGCTGAGGCTGGAGTCCGAGCTGATGTACAAGTCCAAGACCCAGCGCCT
GGAGGAGCGGCAGCTGGACCTGGAGGGCGAGCTCCGCAGGCTGATGGCCAAGCCTG

hide sequence

RefSeq Acc Id:

XM_013521258 ⟹ XP_013376712

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955460	9,085,695 - 9,095,202 (-)	NCBI

Sequence:

show sequence

CTGTGCGTTTTCCCCATGAGCGTGGGAAACAACCTTCCTGAGGCCATGTGGCTTAGGAGCCCCC
GGGGCTGTGTCTCCTGTAGGTGCCCAGCAGCCCCCAGCTCCCCGGTCCCCCAGTGTCTCTACGG
TGGTCCGGCTTGCTTCTGCCCACCCTCCTTCTCAGCCACACAGGTTGGGGGCATGGCTGGCATA
AAGAGGCCCCCGTCGGACCCCGAGGAGGCGCCATCTGGGAAGAAAGCCCCGTCCACAACGGCCA
AGCTGCCCTCACCCGCCCCGGCCCAGGCGCTACCAATGTCTGCAGCCAGGACAAGCTCTGTGGT
TCCGAGGACAGACGGGGGCCCTAAGGCTGGCCAGACGGTGGCGGGCAGTGCAGTCAGCAGCACC
TGCGGGGTCTGCGGCAAGCACGTCCATCTGGTCCAGCGGCACCTGGTTGATGGGCGGCTCTACC
ACCGCAGCTGCTTCAGGTGTAAGCAGTGCTCCAGCACGCTGCGCTCCGGGGCCTACCGGGCCGC
TGGGGAGCCGGGCACCTTTGTCTGCACCAACCATCACTCCAAAGCCAGCTTGGCGAACGCCACA
TCACCGGCCCTGGCTTCCAAACAGCCAGGGGCCACTCCTGTGGAGCCAGGGGCCCCCAGCGTCC
TGCGGAAGGCCCAGGAGATGAATGGGCAGGGAGAGGCAGCGCCGAAGGCCCAGCAAGCAGCCCA
GCAGCCTGCAGTGGGCAATACGACCACAAGAGGCTTTGCTCGGACTCCATCTGAGCCCCCACCC
TCCACCCTTCCTGTCCACGTGGGGAGCCCGGCAGGGTCCAGGCTGCCTGCGGGCCCAGTGGCCT
CCCGCCTGGAGCACAGCACAGCCGGCACGCGTGTGACCAATAGCACCCCAGTGGGGTGGACATC
ATCTGCTCAGGGTCCAGTGACGAACAGCTCTCGGTCTACCCTTAGTGTCCCAGAGCCTTCCTCA
GCCATGCTTCAAGGCCGCGGGGCATCCCGAGTATCAGCTGCTGTGACCAAGCTCAGCTCGAACT
CAGCTTCTTCGGGTGCAGTGGACCCCCCAGCCTGGACCCCCTCGGCCACTAGGACCCAGCAGGC
CCGGGAGAGGTTCTTCCAGAGCCCAGCTGCCCCCAGCAGTGGCCCTGTGGGCCAGACCCGCACC
TCAGCCAACACCCCCTCCCAGGACAGTAGCAGGGAGCAGGCACGGAGCTTTATCAAGAAGGCCC
TCTCGGGGGTGGAGGCGGCTGGCGCCCAGGCGCCTGGCAGGTCCTCCCCCGCTGTGAATTCCTG
TCCTAAAACCGAAGGTCCAAAAGCAGTTCCCTCAGGCAAGCCATCGCAGCCAGACGCTCCCCGC
ACCCTCAGCTCCACTTCGAGGATGGCGCCGTCTGCCCCGAGTGTGGGCAACACCTCACAGGCAT
CTGGGTCATCCCAGGTGGGCAAGGGCTCGGCCGTGTCCTCACAGGTCAGCAGGGCAGGGACAGA
CTCCAGGCTGAAGCCAGAGGCCCCGACGGCAAAAGGTCCAAGCACCAGCCCCCAGCAAAGCCAA
GAGGATGGGCCAGAAGGATGGAGGGCCCGCCTGAAGCCTGTGGATAAGAAGCCGCCCGCTGGGA
GGGCAAAGGAGCTGAAGGAGCCACGGGTCCCGGCAGAGCCAAAGGCTGGAGATGCCCCAGCGGC
CCCCAGGACCTCTGTGCAGGCCTCAGGCGGCCTCCAGGGGGGCGTTCGGATCACCCTGACCCAC
GTACAGCCAGAGCAGACACCGGGCCACCCTGGCCCAGGAACCAGGCTCCCAGCTGCCTCCCCCT
CCTCATCCCCCCGCAGGAGACTGGCCGTCCCTCCCAGCCTCGATGTGTCTGCCGATTGGCTTCA
GTCGGAGCCGTCAGGGCAGGAAGCCGAAGCCCAGAGCCGGAAGCAGAAGCCTCATTCTCAGGAC
AAACCAGGGAGGCCCTCGGGCCTGGCCAGCGTCCCCGCCTCGCCCGAGAAGACCATGTGCTCTC
CTGTCAGGCTGCACCCCGACTATGTCCCCCAAGAGGAGATTGAGAGGCAGCTGCAGGACATCGA
GAGGCAGCTGGACGCGCTGGAGCACAGGGGTGTCGCGCTGGAGCAGCAGCTGCGTGCGGCCGAT
GGGGCTGCCGAGGAGGACGACCTCATGGTGGCCTGGTTCCGGCTTGTCCACGAGAAGCAGCTGC
TGCTGAGGCTGGAGTCCGAGCTGATGTACAAGTCCAAGACCCAGCGCCTGGAGGAGCGGCAGCT
GGACCTGGAGGGCGAGCTCCGCAGGCTGATGGCCAAGCCTGAGGGTCTGAAGTCCCCCCAGGAC
CGGCGGCGAGAGCAGGAGCTGCTGAGCCAGTATGTGAGCACTGTGAATGACCGCAGTGACATTG
TGGACATCCTGGACGAGGACCGACTCAGGGAGAAAGAGGAGGACCAGGTGCTGCAGGACATGAT
CCAGAGGCTGGACCTGCAAAAGAAAAAGTCCAAGTTCCGCTTGTCCAAGATCTGGGGCCAGAAG
AGCAAAAGCAGTCATGCGGAGTGAGCTCTCCGCCGGTGCCGCAGGACCTGCACAGCGCCCTGCC
CGTCTGCGCCTCCACTGCTCCCTCCCTGGGGTCTTCTTGGCCCCAATAAACAGACTGGCGATGC
CTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005397861	(Get FASTA)	NCBI Sequence Viewer
	XP_005397863	(Get FASTA)	NCBI Sequence Viewer
	XP_013376712	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000008945
	ENSCLAP00000008945.1

RefSeq Acc Id:	XP_005397861 ⟸ XM_005397804
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V547 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAIKALQQWCRQQCEGYRDVDITNMTTSFRDGLAFCAILHRHRPDLINYSALRKENIYENNKL AFSVAEEQLGIPALLDAEDMVALKVPDRLSILTYVSQYYNYFHGRSPIGGMAGIKRPPSDPEEA PSGKKAPSTTAKLPSPAPAQALPMSAARTSSVVPRTDGGPKAGQTVAGSAVSSTCGVCGKHVHL VQRHLVDGRLYHRSCFRCKQCSSTLRSGAYRAAGEPGTFVCTNHHSKASLANATSPALASKQPG ATPVEPGAPSVLRKAQEMNGQGEAAPKAQQAAQQPAVGNTTTRGFARTPSEPPPSTLPVHVGSP AGSRLPAGPVASRLEHSTAGTRVTNSTPVGWTSSAQGPVTNSSRSTLSVPEPSSAMLQGRGASR VSAAVTKLSSNSASSGAVDPPAWTPSATRTQQARERFFQSPAAPSSGPVGQTRTSANTPSQDSS REQARSFIKKALSGVEAAGAQAPGRSSPAVNSCPKTEGPKAVPSGKPSQPDAPRTLSSTSRMAP SAPSVGNTSQASGSSQVGKGSAVSSQVSRAGTDSRLKPEAPTAKGPSTSPQQSQEDGPEGWRAR LKPVDKKPPAGRAKELKEPRVPAEPKAGDAPAAPRTSVQASGGLQGGVRITLTHVQPEQTPGHP GPGTRLPAASPSSSPRRRLAVPPSLDVSADWLQSEPSGQEAEAQSRKQKPHSQDKPGRPSGLAS VPASPEKTMCSPVRLHPDYVPQEEIERQLQDIERQLDALEHRGVALEQQLRAADGAAEEDDLMV AWFRLVHEKQLLLRLESELMYKSKTQRLEERQLDLEGELRRLMAKPEGLKSPQDRRREQELLSQ YVSTVNDRSDIVDILDEDRLREKEEDQVLQDMIQRLDLQKKKSKFRLSKIWGQKSKSSHAE hide sequence

RefSeq Acc Id:

XP_005397863 ⟸ XM_005397806

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAAIKALQQWCRQQCEGYRDVDITNMTTSFRDGLAFCAILHRHRPDLINYSALRKENIYENNKL
AFSVAEEQLGIPALLDAEDMVALKVPDRLSILTYVSQYYNYFHGRSPIGGMAGIKRPPSDPEEA
PSGKKAPSTTAKLPSPAPAQALPMSAARTSSVVPRTDGGPKAGQTVAGSAVSSTCGVCGKHVHL
VQRHLVDGRLYHRSCFRCKQCSSTLRSGAYRAAGEPGTFVCTNHHSKASLANATSPALASKQPG
ATPVEPGAPSVLRKAQEMNGQGEAAPKAQQAAQQPAVGNTTTRGFARTPSEPPPSTLPVHVGSP
AGSRLPAGPVASRLEHSTAGTRVTNSTPVGWTSSAQGPVTNSSRSTLSVPEPSSAMLQGRGASR
VSAAVTKLSSNSASSGAVDPPAWTPSATRTQQARERFFQSPAAPSSGPVGQTRTSANTPSQDSS
REQARSFIKKALSGVEAAGAQAPGRSSPAVNSCPKTEGPKAVPSGKPSQPDAPRTLSSTSRMAP
SAPSVGNTSQASGSSQVGKGSAVSSQVSRAGTDSRLKPEAPTAKGPSTSPQQSQEDGPEGWRAR
LKPVDKKPPAGRAKELKEPRVPAEPKAGDAPAAPRTSVQASGGLQGGVRITLTHVQPEQTPGHP
GPGTRLPGDWPSLPASMCLPIGFSRSRQGRKPKPRAGSRSLILRTNQGGPRAWPASPPRPRRPC
ALLSGCTPTMSPKRRLRGSCRTSRGSWTRWSTGVSRWSSSCVRPMGLPRRTTSWWPGSGLSTRS
SCC

hide sequence

RefSeq Acc Id:

XP_013376712 ⟸ XM_013521258

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSVGNNLPEAMWLRSPRGCVSCRCPAAPSSPVPQCLYGGPACFCPPSFSATQVGGMAGIKRPPS
DPEEAPSGKKAPSTTAKLPSPAPAQALPMSAARTSSVVPRTDGGPKAGQTVAGSAVSSTCGVCG
KHVHLVQRHLVDGRLYHRSCFRCKQCSSTLRSGAYRAAGEPGTFVCTNHHSKASLANATSPALA
SKQPGATPVEPGAPSVLRKAQEMNGQGEAAPKAQQAAQQPAVGNTTTRGFARTPSEPPPSTLPV
HVGSPAGSRLPAGPVASRLEHSTAGTRVTNSTPVGWTSSAQGPVTNSSRSTLSVPEPSSAMLQG
RGASRVSAAVTKLSSNSASSGAVDPPAWTPSATRTQQARERFFQSPAAPSSGPVGQTRTSANTP
SQDSSREQARSFIKKALSGVEAAGAQAPGRSSPAVNSCPKTEGPKAVPSGKPSQPDAPRTLSST
SRMAPSAPSVGNTSQASGSSQVGKGSAVSSQVSRAGTDSRLKPEAPTAKGPSTSPQQSQEDGPE
GWRARLKPVDKKPPAGRAKELKEPRVPAEPKAGDAPAAPRTSVQASGGLQGGVRITLTHVQPEQ
TPGHPGPGTRLPAASPSSSPRRRLAVPPSLDVSADWLQSEPSGQEAEAQSRKQKPHSQDKPGRP
SGLASVPASPEKTMCSPVRLHPDYVPQEEIERQLQDIERQLDALEHRGVALEQQLRAADGAAEE
DDLMVAWFRLVHEKQLLLRLESELMYKSKTQRLEERQLDLEGELRRLMAKPEGLKSPQDRRREQ
ELLSQYVSTVNDRSDIVDILDEDRLREKEEDQVLQDMIQRLDLQKKKSKFRLSKIWGQKSKSSH
AE

hide sequence

RefSeq Acc Id:

ENSCLAP00000008945 ⟸ ENSCLAT00000009073

Protein Domains

bMERB Calponin-homology (CH) LIM zinc-binding

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000006245	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000009073	ENTREZGENE
	ENSCLAT00000009073.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.418.10	UniProtKB/TrEMBL
	Cysteine Rich Protein	UniProtKB/TrEMBL
InterPro	bMERB_dom	UniProtKB/TrEMBL
	CH-domain	UniProtKB/TrEMBL
	CH_dom_sf	UniProtKB/TrEMBL
	Znf_LIM	UniProtKB/TrEMBL
NCBI Gene	Micall2	ENTREZGENE
PANTHER	[F-ACTIN]-MONOOXYGENASE MICAL	UniProtKB/TrEMBL
	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	UniProtKB/TrEMBL
Pfam	DUF3585	UniProtKB/TrEMBL
	LIM	UniProtKB/TrEMBL
	PF00307	UniProtKB/TrEMBL
PROSITE	BMERB	UniProtKB/TrEMBL
	LIM_DOMAIN_1	UniProtKB/TrEMBL
	LIM_DOMAIN_2	UniProtKB/TrEMBL
	PS50021	UniProtKB/TrEMBL
SMART	DUF3585	UniProtKB/TrEMBL
	LIM	UniProtKB/TrEMBL
	SM00033	UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
	SSF47576	UniProtKB/TrEMBL
UniProt	A0A8C2V547	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Micall2	MICAL like 2		MICAL-like 2	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar