Mterf1 (mitochondrial transcription termination factor 1)

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Gene: Mterf1 (mitochondrial transcription termination factor 1) Chinchilla lanigera

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Symbol:

Mterf1

Name:

mitochondrial transcription termination factor 1

RGD ID:

9010650

Description:

ENCODES a protein that exhibits double-stranded DNA binding (ortholog); INVOLVED IN DNA geometric change (ortholog); DNA-templated transcription termination (ortholog); termination of mitochondrial transcription (ortholog); ASSOCIATED WITH cerebral cavernous malformation (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Mterf; transcription termination factor 1, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955432	8,906,553 - 8,914,355 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cerebral cavernous malformation (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA geometric change (ISO)

DNA-templated transcription termination (ISO)

termination of mitochondrial transcription (ISO)

Cellular Component

mitochondrial nucleoid (ISO)

mitochondrion (ISO)

Molecular Function

double-stranded DNA binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Mterf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955432	8,906,553 - 8,914,355 (-)	NCBI	ChiLan1.0	ChiLan1.0

MTERF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	91,870,929 - 91,880,702 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	91,692,008 - 91,880,702 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	91,500,243 - 91,510,016 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	91,339,957 - 91,347,952 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	91,146,855 - 91,154,667	NCBI
Celera	7	86,206,613 - 86,214,608 (-)	NCBI		Celera
Cytogenetic Map	7	q21.2	NCBI
HuRef	7	86,109,784 - 86,117,779 (-)	NCBI		HuRef
CHM1_1	7	91,432,061 - 91,440,056 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	93,112,226 - 93,122,026 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	90,832,721 - 90,840,716 (-)	NCBI

Mterf1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	3,914,576 - 3,943,933 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	3,940,581 - 3,943,933 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	3,864,565 - 3,893,933 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	3,890,581 - 3,893,933 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	3,890,581 - 3,893,933 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	3,896,587 - 3,899,913 (-)	NCBI		MGSCv36	mm8
Celera	5	3,826,887 - 3,830,239 (-)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	2.26	NCBI

Mterf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	31,181,048 - 31,188,130 (+)	NCBI		GRCr8
mRatBN7.2	4	30,226,345 - 30,233,402 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	30,226,343 - 30,233,584 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	35,199,159 - 35,206,157 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	31,125,246 - 31,132,244 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	29,521,223 - 29,528,221 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	27,365,310 - 27,372,374 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	27,365,376 - 27,372,372 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	27,268,544 - 27,275,600 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	26,942,113 - 26,949,111 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	26,950,096 - 26,957,093 (+)	NCBI
Celera	4	25,651,722 - 25,658,720 (+)	NCBI		Celera
Cytogenetic Map	4	q13	NCBI

MTERF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	109,762,375 - 109,770,209 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	157,525,258 - 158,034,828 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	83,873,039 - 83,882,815 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	97,472,983 - 97,480,808 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	97,473,701 - 97,478,476 (-)	Ensembl	panpan1.1		panPan2

MTERF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	17,537,964 - 17,545,554 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	17,539,309 - 17,545,531 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	17,099,353 - 17,106,975 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	17,344,695 - 17,352,322 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	17,343,025 - 17,352,292 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	17,502,601 - 17,510,213 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	17,217,316 - 17,224,932 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	17,491,537 - 17,499,157 (-)	NCBI		UU_Cfam_GSD_1.0

Mterf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	30,935,494 - 30,946,583 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936621	2,422,133 - 2,430,306 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936621	2,422,107 - 2,431,854 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTERF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	71,845,662 - 71,853,845 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	71,287,587 - 71,853,866 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	78,333,816 - 78,589,264 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MTERF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	57,108,499 - 57,116,113 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	57,108,537 - 57,116,106 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	47,149,564 - 47,157,493 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mterf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624809	1,322,155 - 1,333,495 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005387997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013516085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01030890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01116604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005387997 ⟹ XP_005388054

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955432	8,906,553 - 8,914,355 (-)	NCBI

Sequence:

show sequence

GCCAGAGGCCGGAAGTTACTTGTCTTCACTTCCGCTCCTCGATCTCAGGATACCGGAGGCGGAA
GTGGGAGGCGTCTCTGAGAGCGGAGCATTCTGAAAGATCTGGGCTGCCTGACCGTTATGGCATC
AAGAAACCTCTGGCATATGAGAAGTAACTTGCTTTTGGGTTCAAGATATTGGACGATCCAATAT
TCAACAGAAATCCTCTTCAGATCCATTTCATTTAGGCTTTTTGGTGTGAAACATGATAATGCAG
ACAGTGAGCCTTCGGAGAATAAAGACCTGCTGAACAACTTACTTACTATGGGAGTTGATATTGA
TATGGCTAAGAAACGACAGCCTGGAGTGTTTAATAGGATGTTCACTAATGAACAGGACCTGCAG
ATTTTCCTTCAGTCCAAAGGAGCTAGCAAAGAAGTGATTGCTAGTATCATATCAAGATATCCAC
GAGCCATAACACGGACTACTGAAAGTCTTTCAAAACGGTGGGATCTATGGAGAAAGATTATCAC
ATCAGACCTTGAAATTGTAAATATTCTGGAACGTTCTCCTGAATCCTTTTTTCGGTCCAGCAAC
AATGAAGACCTGGAGAAAAATATAAATTTCCTCTGTTCAGTTGGATTGACCCATGAATGCCTTT
GTCGATTACTGACCAATGCCCCTCGTACCTTCTCCAATAGTCTTGATCTGAATAAGCACATGGT
TGAATTTTTGCACGAAGTCTGTTTGTCTTTGGGTTATAATGACCCCACAGATTTTGTCAGAAAG
ATTATTTTCAAAAACCCTTTCATCTTAATTCAGAGCACCAAGCGAGTGAAAGCTAACATTGAAT
TTTTACAGTCAACTTTCACCTTGAACAAGGATGAACTACTGGTTCTGATACGTGGTTCAGGAGC
TGGAATCCTAGACCTTTCCAATGACTGTGTCAAAAGAAACTACACAAATATCAAAGAGAAGCTT
TTTTCTTTTGGGTGTACTGAAGAAGAGGTACACAAGTTTGTCTTAAGCTATCCAGACATGATCT
TCTTGGCAGAGAAAAAGTTTAATGATAAAATAGATTACCTCATAACAGAAAAAATTAGTATTTC
ACAAATAATTGAAAGTCCTCGGGTTCTAGATTCGAGCCTAAATACTTTAAAAAGTCGAACCAAA
GAATTGGTACATGCTGGCTATAACTTGAATACATCAAACATCACTATTCTGTCTTGGAGTCAAA
AAAGGTATCAAGCTAAACTGAAAAAGATAAGAAAACAGCACTTGGGCCTTAAGTCTTAAAACAT
GGTGATGCTTATTTTTGATTTTGGACTGTCAAAGGAGAATTTTGATTTCTTTGCCACAGATACA
TGTATACTGATTTTTTGGATATTTTGGCCTAAAAGTTTGTAAAACCTCATGATTAGTGTCTTCC
AGTTACTTCTCCCAGCTACTACTCTGTCAGTTTGAAGTAATGCAAAATTGTGTGTAGGCTGTGG
TGCTGTACACTATGGGAGTTCTTTAGTGCTATGCAGACAGTGTGATGGTACAAAAACAGCTCTT
GTGGTTTCTATTCGATTTAAAAATTGACAGATTTGGGCTGGATATATAGCTTAGTAGTGACAGC
ACTTGCCTAGTGTGTGCATGGCCCTGAATTCGATCCCCAGCACAGTCAAAATAAAGACAGAAGA
CAGAAAACAAATGGACAGGTTCATTTGGGTAATGAATTCTGTTTCCTGCCATGGTGTTGAATGC
CAGGTCATTTTATTATTCCGTGTCAAATTAGGGTTCATCCTGAAAATAGAATGCCAGTAAGAAT
AATAAAATTCTGACAGAAAGGAGGAATTTTTTCATTCCAAGTTCCATGTTCTCCATGTAAACCC
ATTACTGTGCTGTTATACCCTTCTTGCTCAAAAAACAACCCCATAATTTACAAAAGGTGTGTTC
ATATTTCTTTGAAGACAAGGCCACCTGTGGTGGGTATTAGAATGGGCACCTAAAGACGTTACTG
TCTGGTTCCCAGAAGCTGTGAATATGTCATGTTACATTGCAGTGGACTTTACAGAAGTGATTAA
GTTAAGATGTGATTAAGTGAAGACTCTTGAGATGGGAAAATTATCCTAAATTACTTGGGTGGGC
CCAGTATAATCATAGGATCCTTAAAAGTGAGGAGGGAGCCAAAAGAGGAGGCCATAGGGGTGTT
ATATATGAATGACTTGGCCACTTCTGGCTGTGAAGGACAGAGGGGCCATGAAGCAAGGAATGTG
GGTGGCTTACAAAAGGCAAGGAACAGGAGTCCTCTAAGCCCTCCCAAAATGAGTGCAGCCTCGC
TGGCACCTTGATGTTAGCCCAGTGAGACCAATATCAAGCTTCTGATCTATAGAACCATAAGAAT
AAATGTGTGTTATTTTAAACCACTGAGTTTGTGATAACCTGTGATATGAAATAGATTGGTATAG
CAACTGAGTAGATGATTTGTCTCATTCCAGGTGAAGAAATCACAAAGTACAGTCCTCATTGCAT
CATTTCTCTATTTCTGTATTTTTATATTCAGTTTCTTATATAAGTAATTACATTTTTAAAAGAA
ATTACCTATTTTAAAGAATTGGAGTTGCTAACAAGTTAATATTTATGAAGTCCTCTAAAGATGA
ATAAAAAAATAAGTATAAATACTATCATTAAAAAAAGCAATTTTTTGCCTAATGGGTATAGCTT
AAGAAATACTGGTCATTTCCATGTATTTATATTTTGCTGGTGTTTCATCTAAGTAAGAAGTGAG
GAATTTTAGAGACATTGAATTGAATGAGAAGATCATGGCTATATCATATATCGGTTTGTATCAT
CTATAGAAACAAATTGTTTTTTATAAGGGTATTTATATATGTTCAGTGATAGTCATAATTACTT
GCAGTGAACTATTTGATAGCAAGGATGGCATACTTTAGAAAATGTGGGCTTTATAGAAACATTT
TCTAGAGTGCAATAGCTGGGCACCATTTCTGATTAATTGTATTTTGTGTAACTATTTTAAATTC
ATTGAATTGTTTTCAATGGTATTTTATTAATGGTAGCTTAAGAAAACATACAGAAATGTTTTAA
AAAACAGTTTTGTGGGTGTATAGTTCATATACTATACAATTCACTCAAAGTATACAATTGAATA
TTTTTTAAAACATATGGTATGCAACCATTGCCTTGCAACCCTAAGCAAAAACTAATCTTTCTGC
CTCTAAATTTTATCATTCTGTGTATTTCATATAAATGATCTAATACAATGCTGTATGTGGTTTT
TTGATTGACTTCTTTCATTTAGCATAATGTTTTCAAGGTTTATCCATGTATCACATACCAGCAT
TCCTTTTTATTGTTAAATAATATTCCATTGTATGGATAAGTAGGGTTATTGGGAATATATTTTA
TTGTACACAAAGCATTAATTCCCTAAACCTTTTTAATTATATGGAAAAACTTTCCAAGATA

hide sequence

RefSeq Acc Id:

XM_005387998 ⟹ XP_005388055

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955432	8,906,553 - 8,914,037 (-)	NCBI

Sequence:

show sequence

GGCAGTGTTTCAGATTTTGTAATTTTAGGGGTAATTTCTAACTCTTAAATTGTCCTGGAGGATT
AAATAAGACAGTGTGTATGAAGCACTTAATTCTCATATTCGTGGTTCCATTTTTCACATCGTAG
CAGGCATTTTTTTGCTATTTTTTTCCAGTACGACTGACAAATGTATAGTTTGTAAGAGATAATG
CATCTCACGAAAATATTATGCAGTGTTAGCTAGAGTCGATCCTTTCATTCCCCGTTAGGAATTC
CTGATAATATTTTGCCTTTTCTATGATGGGAGTTGTTTAGAAACAGCTATTTTTCAGCTTTTCT
GGAGGGATGAAAAGTCCTCTTAAGAGAAATAAGCATTCTGAAAGATCTGGGCTGCCTGACCGTT
ATGGCATCAAGAAACCTCTGGCATATGAGAAGTAACTTGCTTTTGGGTTCAAGATATTGGACGA
TCCAATATTCAACAGAAATCCTCTTCAGATCCATTTCATTTAGGCTTTTTGGTGTGAAACATGA
TAATGCAGACAGTGAGCCTTCGGAGAATAAAGACCTGCTGAACAACTTACTTACTATGGGAGTT
GATATTGATATGGCTAAGAAACGACAGCCTGGAGTGTTTAATAGGATGTTCACTAATGAACAGG
ACCTGCAGATTTTCCTTCAGTCCAAAGGAGCTAGCAAAGAAGTGATTGCTAGTATCATATCAAG
ATATCCACGAGCCATAACACGGACTACTGAAAGTCTTTCAAAACGGTGGGATCTATGGAGAAAG
ATTATCACATCAGACCTTGAAATTGTAAATATTCTGGAACGTTCTCCTGAATCCTTTTTTCGGT
CCAGCAACAATGAAGACCTGGAGAAAAATATAAATTTCCTCTGTTCAGTTGGATTGACCCATGA
ATGCCTTTGTCGATTACTGACCAATGCCCCTCGTACCTTCTCCAATAGTCTTGATCTGAATAAG
CACATGGTTGAATTTTTGCACGAAGTCTGTTTGTCTTTGGGTTATAATGACCCCACAGATTTTG
TCAGAAAGATTATTTTCAAAAACCCTTTCATCTTAATTCAGAGCACCAAGCGAGTGAAAGCTAA
CATTGAATTTTTACAGTCAACTTTCACCTTGAACAAGGATGAACTACTGGTTCTGATACGTGGT
TCAGGAGCTGGAATCCTAGACCTTTCCAATGACTGTGTCAAAAGAAACTACACAAATATCAAAG
AGAAGCTTTTTTCTTTTGGGTGTACTGAAGAAGAGGTACACAAGTTTGTCTTAAGCTATCCAGA
CATGATCTTCTTGGCAGAGAAAAAGTTTAATGATAAAATAGATTACCTCATAACAGAAAAAATT
AGTATTTCACAAATAATTGAAAGTCCTCGGGTTCTAGATTCGAGCCTAAATACTTTAAAAAGTC
GAACCAAAGAATTGGTACATGCTGGCTATAACTTGAATACATCAAACATCACTATTCTGTCTTG
GAGTCAAAAAAGGTATCAAGCTAAACTGAAAAAGATAAGAAAACAGCACTTGGGCCTTAAGTCT
TAAAACATGGTGATGCTTATTTTTGATTTTGGACTGTCAAAGGAGAATTTTGATTTCTTTGCCA
CAGATACATGTATACTGATTTTTTGGATATTTTGGCCTAAAAGTTTGTAAAACCTCATGATTAG
TGTCTTCCAGTTACTTCTCCCAGCTACTACTCTGTCAGTTTGAAGTAATGCAAAATTGTGTGTA
GGCTGTGGTGCTGTACACTATGGGAGTTCTTTAGTGCTATGCAGACAGTGTGATGGTACAAAAA
CAGCTCTTGTGGTTTCTATTCGATTTAAAAATTGACAGATTTGGGCTGGATATATAGCTTAGTA
GTGACAGCACTTGCCTAGTGTGTGCATGGCCCTGAATTCGATCCCCAGCACAGTCAAAATAAAG
ACAGAAGACAGAAAACAAATGGACAGGTTCATTTGGGTAATGAATTCTGTTTCCTGCCATGGTG
TTGAATGCCAGGTCATTTTATTATTCCGTGTCAAATTAGGGTTCATCCTGAAAATAGAATGCCA
GTAAGAATAATAAAATTCTGACAGAAAGGAGGAATTTTTTCATTCCAAGTTCCATGTTCTCCAT
GTAAACCCATTACTGTGCTGTTATACCCTTCTTGCTCAAAAAACAACCCCATAATTTACAAAAG
GTGTGTTCATATTTCTTTGAAGACAAGGCCACCTGTGGTGGGTATTAGAATGGGCACCTAAAGA
CGTTACTGTCTGGTTCCCAGAAGCTGTGAATATGTCATGTTACATTGCAGTGGACTTTACAGAA
GTGATTAAGTTAAGATGTGATTAAGTGAAGACTCTTGAGATGGGAAAATTATCCTAAATTACTT
GGGTGGGCCCAGTATAATCATAGGATCCTTAAAAGTGAGGAGGGAGCCAAAAGAGGAGGCCATA
GGGGTGTTATATATGAATGACTTGGCCACTTCTGGCTGTGAAGGACAGAGGGGCCATGAAGCAA
GGAATGTGGGTGGCTTACAAAAGGCAAGGAACAGGAGTCCTCTAAGCCCTCCCAAAATGAGTGC
AGCCTCGCTGGCACCTTGATGTTAGCCCAGTGAGACCAATATCAAGCTTCTGATCTATAGAACC
ATAAGAATAAATGTGTGTTATTTTAAACCACTGAGTTTGTGATAACCTGTGATATGAAATAGAT
TGGTATAGCAACTGAGTAGATGATTTGTCTCATTCCAGGTGAAGAAATCACAAAGTACAGTCCT
CATTGCATCATTTCTCTATTTCTGTATTTTTATATTCAGTTTCTTATATAAGTAATTACATTTT
TAAAAGAAATTACCTATTTTAAAGAATTGGAGTTGCTAACAAGTTAATATTTATGAAGTCCTCT
AAAGATGAATAAAAAAATAAGTATAAATACTATCATTAAAAAAAGCAATTTTTTGCCTAATGGG
TATAGCTTAAGAAATACTGGTCATTTCCATGTATTTATATTTTGCTGGTGTTTCATCTAAGTAA
GAAGTGAGGAATTTTAGAGACATTGAATTGAATGAGAAGATCATGGCTATATCATATATCGGTT
TGTATCATCTATAGAAACAAATTGTTTTTTATAAGGGTATTTATATATGTTCAGTGATAGTCAT
AATTACTTGCAGTGAACTATTTGATAGCAAGGATGGCATACTTTAGAAAATGTGGGCTTTATAG
AAACATTTTCTAGAGTGCAATAGCTGGGCACCATTTCTGATTAATTGTATTTTGTGTAACTATT
TTAAATTCATTGAATTGTTTTCAATGGTATTTTATTAATGGTAGCTTAAGAAAACATACAGAAA
TGTTTTAAAAAACAGTTTTGTGGGTGTATAGTTCATATACTATACAATTCACTCAAAGTATACA
ATTGAATATTTTTTAAAACATATGGTATGCAACCATTGCCTTGCAACCCTAAGCAAAAACTAAT
CTTTCTGCCTCTAAATTTTATCATTCTGTGTATTTCATATAAATGATCTAATACAATGCTGTAT
GTGGTTTTTTGATTGACTTCTTTCATTTAGCATAATGTTTTCAAGGTTTATCCATGTATCACAT
ACCAGCATTCCTTTTTATTGTTAAATAATATTCCATTGTATGGATAAGTAGGGTTATTGGGAAT
ATATTTTATTGTACACAAAGCATTAATTCCCTAAACCTTTTTAATTATATGGAAAAACTTTCCA
AGATA

hide sequence

RefSeq Acc Id:

XM_013516085 ⟹ XP_013371539

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955432	8,906,553 - 8,914,305 (-)	NCBI

Sequence:

show sequence

TACCGGAGGCGGAAGTGGGAGGCGTCTCTGAGAGCCATTCTGAAAGATCTGGGCTGCCTGACCG
TTATGGCATCAAGAAACCTCTGGCATATGAGAAGTAACTTGCTTTTGGGTTCAAGATATTGGAC
GATCCAATATTCAACAGAAATCCTCTTCAGATCCATTTCATTTAGGCTTTTTGGTGTGAAACAT
GATAATGCAGACAGTGAGCCTTCGGAGAATAAAGACCTGCTGAACAACTTACTTACTATGGGAG
TTGATATTGATATGGCTAAGAAACGACAGCCTGGAGTGTTTAATAGGATGTTCACTAATGAACA
GGACCTGCAGATTTTCCTTCAGTCCAAAGGAGCTAGCAAAGAAGTGATTGCTAGTATCATATCA
AGATATCCACGAGCCATAACACGGACTACTGAAAGTCTTTCAAAACGGTGGGATCTATGGAGAA
AGATTATCACATCAGACCTTGAAATTGTAAATATTCTGGAACGTTCTCCTGAATCCTTTTTTCG
GTCCAGCAACAATGAAGACCTGGAGAAAAATATAAATTTCCTCTGTTCAGTTGGATTGACCCAT
GAATGCCTTTGTCGATTACTGACCAATGCCCCTCGTACCTTCTCCAATAGTCTTGATCTGAATA
AGCACATGGTTGAATTTTTGCACGAAGTCTGTTTGTCTTTGGGTTATAATGACCCCACAGATTT
TGTCAGAAAGATTATTTTCAAAAACCCTTTCATCTTAATTCAGAGCACCAAGCGAGTGAAAGCT
AACATTGAATTTTTACAGTCAACTTTCACCTTGAACAAGGATGAACTACTGGTTCTGATACGTG
GTTCAGGAGCTGGAATCCTAGACCTTTCCAATGACTGTGTCAAAAGAAACTACACAAATATCAA
AGAGAAGCTTTTTTCTTTTGGGTGTACTGAAGAAGAGGTACACAAGTTTGTCTTAAGCTATCCA
GACATGATCTTCTTGGCAGAGAAAAAGTTTAATGATAAAATAGATTACCTCATAACAGAAAAAA
TTAGTATTTCACAAATAATTGAAAGTCCTCGGGTTCTAGATTCGAGCCTAAATACTTTAAAAAG
TCGAACCAAAGAATTGGTACATGCTGGCTATAACTTGAATACATCAAACATCACTATTCTGTCT
TGGAGTCAAAAAAGGTATCAAGCTAAACTGAAAAAGATAAGAAAACAGCACTTGGGCCTTAAGT
CTTAAAACATGGTGATGCTTATTTTTGATTTTGGACTGTCAAAGGAGAATTTTGATTTCTTTGC
CACAGATACATGTATACTGATTTTTTGGATATTTTGGCCTAAAAGTTTGTAAAACCTCATGATT
AGTGTCTTCCAGTTACTTCTCCCAGCTACTACTCTGTCAGTTTGAAGTAATGCAAAATTGTGTG
TAGGCTGTGGTGCTGTACACTATGGGAGTTCTTTAGTGCTATGCAGACAGTGTGATGGTACAAA
AACAGCTCTTGTGGTTTCTATTCGATTTAAAAATTGACAGATTTGGGCTGGATATATAGCTTAG
TAGTGACAGCACTTGCCTAGTGTGTGCATGGCCCTGAATTCGATCCCCAGCACAGTCAAAATAA
AGACAGAAGACAGAAAACAAATGGACAGGTTCATTTGGGTAATGAATTCTGTTTCCTGCCATGG
TGTTGAATGCCAGGTCATTTTATTATTCCGTGTCAAATTAGGGTTCATCCTGAAAATAGAATGC
CAGTAAGAATAATAAAATTCTGACAGAAAGGAGGAATTTTTTCATTCCAAGTTCCATGTTCTCC
ATGTAAACCCATTACTGTGCTGTTATACCCTTCTTGCTCAAAAAACAACCCCATAATTTACAAA
AGGTGTGTTCATATTTCTTTGAAGACAAGGCCACCTGTGGTGGGTATTAGAATGGGCACCTAAA
GACGTTACTGTCTGGTTCCCAGAAGCTGTGAATATGTCATGTTACATTGCAGTGGACTTTACAG
AAGTGATTAAGTTAAGATGTGATTAAGTGAAGACTCTTGAGATGGGAAAATTATCCTAAATTAC
TTGGGTGGGCCCAGTATAATCATAGGATCCTTAAAAGTGAGGAGGGAGCCAAAAGAGGAGGCCA
TAGGGGTGTTATATATGAATGACTTGGCCACTTCTGGCTGTGAAGGACAGAGGGGCCATGAAGC
AAGGAATGTGGGTGGCTTACAAAAGGCAAGGAACAGGAGTCCTCTAAGCCCTCCCAAAATGAGT
GCAGCCTCGCTGGCACCTTGATGTTAGCCCAGTGAGACCAATATCAAGCTTCTGATCTATAGAA
CCATAAGAATAAATGTGTGTTATTTTAAACCACTGAGTTTGTGATAACCTGTGATATGAAATAG
ATTGGTATAGCAACTGAGTAGATGATTTGTCTCATTCCAGGTGAAGAAATCACAAAGTACAGTC
CTCATTGCATCATTTCTCTATTTCTGTATTTTTATATTCAGTTTCTTATATAAGTAATTACATT
TTTAAAAGAAATTACCTATTTTAAAGAATTGGAGTTGCTAACAAGTTAATATTTATGAAGTCCT
CTAAAGATGAATAAAAAAATAAGTATAAATACTATCATTAAAAAAAGCAATTTTTTGCCTAATG
GGTATAGCTTAAGAAATACTGGTCATTTCCATGTATTTATATTTTGCTGGTGTTTCATCTAAGT
AAGAAGTGAGGAATTTTAGAGACATTGAATTGAATGAGAAGATCATGGCTATATCATATATCGG
TTTGTATCATCTATAGAAACAAATTGTTTTTTATAAGGGTATTTATATATGTTCAGTGATAGTC
ATAATTACTTGCAGTGAACTATTTGATAGCAAGGATGGCATACTTTAGAAAATGTGGGCTTTAT
AGAAACATTTTCTAGAGTGCAATAGCTGGGCACCATTTCTGATTAATTGTATTTTGTGTAACTA
TTTTAAATTCATTGAATTGTTTTCAATGGTATTTTATTAATGGTAGCTTAAGAAAACATACAGA
AATGTTTTAAAAAACAGTTTTGTGGGTGTATAGTTCATATACTATACAATTCACTCAAAGTATA
CAATTGAATATTTTTTAAAACATATGGTATGCAACCATTGCCTTGCAACCCTAAGCAAAAACTA
ATCTTTCTGCCTCTAAATTTTATCATTCTGTGTATTTCATATAAATGATCTAATACAATGCTGT
ATGTGGTTTTTTGATTGACTTCTTTCATTTAGCATAATGTTTTCAAGGTTTATCCATGTATCAC
ATACCAGCATTCCTTTTTATTGTTAAATAATATTCCATTGTATGGATAAGTAGGGTTATTGGGA
ATATATTTTATTGTACACAAAGCATTAATTCCCTAAACCTTTTTAATTATATGGAAAAACTTTC
CAAGATA

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Protein Sequences


Protein RefSeqs	XP_005388054	(Get FASTA)	NCBI Sequence Viewer
	XP_005388055	(Get FASTA)	NCBI Sequence Viewer
	XP_013371539	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005388054 ⟸ XM_005387997

- Sequence:

show sequence

MASRNLWHMRSNLLLGSRYWTIQYSTEILFRSISFRLFGVKHDNADSEPSENKDLLNNLLTMGV
DIDMAKKRQPGVFNRMFTNEQDLQIFLQSKGASKEVIASIISRYPRAITRTTESLSKRWDLWRK
IITSDLEIVNILERSPESFFRSSNNEDLEKNINFLCSVGLTHECLCRLLTNAPRTFSNSLDLNK
HMVEFLHEVCLSLGYNDPTDFVRKIIFKNPFILIQSTKRVKANIEFLQSTFTLNKDELLVLIRG
SGAGILDLSNDCVKRNYTNIKEKLFSFGCTEEEVHKFVLSYPDMIFLAEKKFNDKIDYLITEKI
SISQIIESPRVLDSSLNTLKSRTKELVHAGYNLNTSNITILSWSQKRYQAKLKKIRKQHLGLKS

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RefSeq Acc Id:

XP_005388055 ⟸ XM_005387998

- Sequence:

show sequence

MASRNLWHMRSNLLLGSRYWTIQYSTEILFRSISFRLFGVKHDNADSEPSENKDLLNNLLTMGV
DIDMAKKRQPGVFNRMFTNEQDLQIFLQSKGASKEVIASIISRYPRAITRTTESLSKRWDLWRK
IITSDLEIVNILERSPESFFRSSNNEDLEKNINFLCSVGLTHECLCRLLTNAPRTFSNSLDLNK
HMVEFLHEVCLSLGYNDPTDFVRKIIFKNPFILIQSTKRVKANIEFLQSTFTLNKDELLVLIRG
SGAGILDLSNDCVKRNYTNIKEKLFSFGCTEEEVHKFVLSYPDMIFLAEKKFNDKIDYLITEKI
SISQIIESPRVLDSSLNTLKSRTKELVHAGYNLNTSNITILSWSQKRYQAKLKKIRKQHLGLKS

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RefSeq Acc Id:

XP_013371539 ⟸ XM_013516085

- Sequence:

show sequence

MASRNLWHMRSNLLLGSRYWTIQYSTEILFRSISFRLFGVKHDNADSEPSENKDLLNNLLTMGV
DIDMAKKRQPGVFNRMFTNEQDLQIFLQSKGASKEVIASIISRYPRAITRTTESLSKRWDLWRK
IITSDLEIVNILERSPESFFRSSNNEDLEKNINFLCSVGLTHECLCRLLTNAPRTFSNSLDLNK
HMVEFLHEVCLSLGYNDPTDFVRKIIFKNPFILIQSTKRVKANIEFLQSTFTLNKDELLVLIRG
SGAGILDLSNDCVKRNYTNIKEKLFSFGCTEEEVHKFVLSYPDMIFLAEKKFNDKIDYLITEKI
SISQIIESPRVLDSSLNTLKSRTKELVHAGYNLNTSNITILSWSQKRYQAKLKKIRKQHLGLKS

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Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	Mterf	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-25	Mterf1	mitochondrial transcription termination factor 1	Mterf	mitochondrial transcription termination factor	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar