Slc25a26 (solute carrier family 25 member 26) - Rat Genome Database

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Gene: Slc25a26 (solute carrier family 25 member 26) Chinchilla lanigera
Analyze
Symbol: Slc25a26
Name: solute carrier family 25 member 26
RGD ID: 8974136
Description: ENCODES a protein that exhibits S-adenosyl-L-methionine transmembrane transporter activity (ortholog); S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity (ortholog); INVOLVED IN macromolecule methylation (ortholog); mitochondrial S-adenosyl-L-methionine transmembrane transport (ortholog); S-adenosyl-L-methionine transport (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 28 (ortholog); genetic disease (ortholog); Hypokalemic Periodic Paralysis, Type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: solute carrier family 25 (S-adenosylmethionine carrier), member 26
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542121,219,904 - 21,342,260 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542121,220,071 - 21,334,330 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Slc25a26
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542121,219,904 - 21,342,260 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542121,220,071 - 21,334,330 (-)NCBIChiLan1.0ChiLan1.0
SLC25A26
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38366,133,610 - 66,378,927 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl366,133,610 - 66,388,116 (+)EnsemblGRCh38hg38GRCh38
GRCh37366,119,285 - 66,429,351 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36366,376,317 - 66,512,041 (+)NCBINCBI36Build 36hg18NCBI36
Build 34366,376,316 - 66,512,039NCBI
Celera366,136,355 - 66,375,193 (+)NCBICelera
Cytogenetic Map3p14.1NCBI
HuRef366,288,545 - 66,446,692 (+)NCBIHuRef
HuRef366,216,877 - 66,217,253 (+)NCBIHuRef
CHM1_1366,222,376 - 66,380,592 (+)NCBICHM1_1
CHM1_1366,070,541 - 66,070,917 (+)NCBICHM1_1
T2T-CHM13v2.0366,177,942 - 66,423,497 (+)NCBIT2T-CHM13v2.0
Slc25a26
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39694,477,272 - 94,581,636 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl694,477,312 - 94,581,653 (+)EnsemblGRCm39 Ensembl
GRCm38694,500,295 - 94,604,659 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl694,500,331 - 94,604,672 (+)EnsemblGRCm38mm10GRCm38
MGSCv37694,450,308 - 94,554,649 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36694,465,810 - 94,570,136 (+)NCBIMGSCv36mm8
Celera696,400,787 - 96,505,115 (+)NCBICelera
Cytogenetic Map6D2NCBI
cM Map643.13NCBI
Slc25a26
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84128,591,223 - 128,687,854 (+)NCBIGRCr8
mRatBN7.24127,036,704 - 127,131,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4127,036,742 - 127,131,020 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4132,506,524 - 132,606,794 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04128,280,995 - 128,381,264 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04126,905,498 - 127,005,773 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04126,522,335 - 126,615,402 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4126,522,326 - 126,615,314 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04191,036,169 - 191,129,236 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44128,822,640 - 128,917,832 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14129,067,557 - 129,151,723 (+)NCBI
Celera4115,945,841 - 116,039,264 (+)NCBICelera
Cytogenetic Map4q34NCBI
SLC25A26
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2266,102,062 - 66,291,149 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1366,106,848 - 66,295,935 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0366,112,241 - 66,271,151 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1367,483,657 - 67,642,988 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl367,483,669 - 67,642,988 (+)Ensemblpanpan1.1panPan2
SLC25A26
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12025,032,708 - 25,167,574 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2024,998,420 - 25,167,498 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2024,944,162 - 25,139,968 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02025,058,808 - 25,254,522 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2025,058,917 - 25,188,057 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12024,755,791 - 24,951,583 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02025,102,919 - 25,298,490 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02025,162,612 - 25,358,927 (-)NCBIUU_Cfam_GSD_1.0
Slc25a26
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118161,849,039 - 161,982,080 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936637239,416 - 361,271 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936637239,416 - 371,635 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A26
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1347,743,617 - 47,910,196 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11347,743,476 - 47,909,910 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21352,485,644 - 52,650,499 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A26
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12227,233,997 - 27,401,529 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2227,233,991 - 27,400,565 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041139,410,755 - 139,573,585 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a26
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624773545,059 - 712,725 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000005670   ⟹   ENSCLAP00000005569
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542121,219,904 - 21,342,260 (-)Ensembl
RefSeq Acc Id: XM_013513718   ⟹   XP_013369172
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542121,220,071 - 21,334,330 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513719   ⟹   XP_013369173
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542121,220,071 - 21,334,321 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513720   ⟹   XP_013369174
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542121,220,187 - 21,332,844 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513721   ⟹   XP_013369175
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542121,220,071 - 21,332,087 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513722   ⟹   XP_013369176
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542121,220,071 - 21,332,771 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013513723   ⟹   XP_013369177
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542121,220,071 - 21,332,844 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013369172   ⟸   XM_013513718
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013369173   ⟸   XM_013513719
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013369177   ⟸   XM_013513723
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013369176   ⟸   XM_013513722
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013369175   ⟸   XM_013513721
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013369174   ⟸   XM_013513720
- Peptide Label: isoform X2
- UniProtKB: A0A8C2UZV1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000005569   ⟸   ENSCLAT00000005670


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003949 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005670 ENTREZGENE
  ENSCLAT00000005670.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
NCBI Gene Slc25a26 ENTREZGENE
PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN UniProtKB/TrEMBL
  S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS MITOCARRIER UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt A0A8C2UZV1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Slc25a26  solute carrier family 25 member 26    solute carrier family 25 (S-adenosylmethionine carrier), member 26  Symbol and/or name change 5135510 APPROVED