Slc25a26 (solute carrier family 25 member 26) - Rat Genome Database

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Gene: Slc25a26 (solute carrier family 25 member 26) Heterocephalus glaber
Analyze
Symbol: Slc25a26
Name: solute carrier family 25 member 26
RGD ID: 18904740
Description: ENCODES a protein that exhibits S-adenosyl-L-methionine transmembrane transporter activity (ortholog); S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity (ortholog); INVOLVED IN macromolecule methylation (ortholog); mitochondrial S-adenosyl-L-methionine transmembrane transport (ortholog); S-adenosyl-L-methionine transport (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 28 (ortholog); genetic disease (ortholog); Hypokalemic Periodic Paralysis, Type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: S-adenosylmethionine mitochondrial carrier protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624773545,059 - 712,725 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc25a26
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624773545,059 - 712,725 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
SLC25A26
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38366,133,610 - 66,378,927 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl366,133,610 - 66,388,116 (+)EnsemblGRCh38hg38GRCh38
GRCh37366,119,285 - 66,429,351 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36366,376,317 - 66,512,041 (+)NCBINCBI36Build 36hg18NCBI36
Build 34366,376,316 - 66,512,039NCBI
Celera366,136,355 - 66,375,193 (+)NCBICelera
Cytogenetic Map3p14.1NCBI
HuRef366,288,545 - 66,446,692 (+)NCBIHuRef
HuRef366,216,877 - 66,217,253 (+)NCBIHuRef
CHM1_1366,222,376 - 66,380,592 (+)NCBICHM1_1
CHM1_1366,070,541 - 66,070,917 (+)NCBICHM1_1
T2T-CHM13v2.0366,177,942 - 66,423,497 (+)NCBIT2T-CHM13v2.0
Slc25a26
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39694,477,272 - 94,581,636 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl694,477,312 - 94,581,653 (+)EnsemblGRCm39 Ensembl
GRCm38694,500,295 - 94,604,659 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl694,500,331 - 94,604,672 (+)EnsemblGRCm38mm10GRCm38
MGSCv37694,450,308 - 94,554,649 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36694,465,810 - 94,570,136 (+)NCBIMGSCv36mm8
Celera696,400,787 - 96,505,115 (+)NCBICelera
Cytogenetic Map6D2NCBI
cM Map643.13NCBI
Slc25a26
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84128,591,223 - 128,687,854 (+)NCBIGRCr8
mRatBN7.24127,036,704 - 127,131,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4127,036,742 - 127,131,020 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4132,506,524 - 132,606,794 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04128,280,995 - 128,381,264 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04126,905,498 - 127,005,773 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04126,522,335 - 126,615,402 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4126,522,326 - 126,615,314 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04191,036,169 - 191,129,236 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44128,822,640 - 128,917,832 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14129,067,557 - 129,151,723 (+)NCBI
Celera4115,945,841 - 116,039,264 (+)NCBICelera
Cytogenetic Map4q34NCBI
Slc25a26
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542121,219,904 - 21,342,260 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542121,220,071 - 21,334,330 (-)NCBIChiLan1.0ChiLan1.0
SLC25A26
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2266,102,062 - 66,291,149 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1366,106,848 - 66,295,935 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0366,112,241 - 66,271,151 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1367,483,657 - 67,642,988 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl367,483,669 - 67,642,988 (+)Ensemblpanpan1.1panPan2
SLC25A26
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12025,032,708 - 25,167,574 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2024,998,420 - 25,167,498 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2024,944,162 - 25,139,968 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02025,058,808 - 25,254,522 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2025,058,917 - 25,188,057 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12024,755,791 - 24,951,583 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02025,102,919 - 25,298,490 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02025,162,612 - 25,358,927 (-)NCBIUU_Cfam_GSD_1.0
Slc25a26
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118161,849,039 - 161,982,080 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936637239,416 - 361,271 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936637239,416 - 371,635 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A26
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1347,743,617 - 47,910,196 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11347,743,476 - 47,909,910 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21352,485,644 - 52,650,499 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A26
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12227,233,997 - 27,401,529 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2227,233,991 - 27,400,565 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041139,410,755 - 139,573,585 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000015065   ⟹   ENSHGLP00000014915
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624773545,059 - 712,725 (+)Ensembl
RefSeq Acc Id: XM_004854168   ⟹   XP_004854225
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBI
RefSeq Acc Id: XM_004854169   ⟹   XP_004854226
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBI
RefSeq Acc Id: XM_004854170   ⟹   XP_004854227
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624773545,326 - 711,419 (+)NCBI
RefSeq Acc Id: XM_021266011   ⟹   XP_021121670
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBI
RefSeq Acc Id: XM_021266012   ⟹   XP_021121671
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBI
RefSeq Acc Id: XM_021266014   ⟹   XP_021121673
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624773545,299 - 711,419 (+)NCBI
RefSeq Acc Id: XP_004854225   ⟸   XM_004854168
- Peptide Label: isoform X1
- UniProtKB: A0AAX6PL21 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004854226   ⟸   XM_004854169
- Peptide Label: isoform X3
- UniProtKB: A0AAX6PM26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121670   ⟸   XM_021266011
- Peptide Label: isoform X2
- UniProtKB: A0AAX6TKJ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121673   ⟸   XM_021266014
- Peptide Label: isoform X5
- UniProtKB: A0AAX6TL91 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121671   ⟸   XM_021266012
- Peptide Label: isoform X4
- UniProtKB: A0AAX6TLR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004854227   ⟸   XM_004854170
- Peptide Label: isoform X6
- UniProtKB: A0AAX6PM19 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000014915   ⟸   ENSHGLT00000015065


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000010661 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000015065 ENTREZGENE
NCBI Gene Slc25a26 ENTREZGENE
UniProt A0AAX6PL21 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6PM19 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6PM26 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6TKJ1 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6TL91 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6TLR1 ENTREZGENE, UniProtKB/TrEMBL