Oxgr1 (oxoglutarate receptor 1) - Rat Genome Database

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Gene: Oxgr1 (oxoglutarate receptor 1) Chinchilla lanigera
Analyze
Symbol: Oxgr1
Name: oxoglutarate receptor 1
RGD ID: 8971967
Description: ASSOCIATED WITH Anal Atresia, Hypospadias, and Penoscrotal Inversion (ortholog); holoprosencephaly 5 (ortholog); Otitis Media with Effusion (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 2-oxoglutarate receptor 1; oxoglutarate (alpha-ketoglutarate) receptor 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540413,337,607 - 13,344,789 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540413,337,607 - 13,344,789 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data
Oxgr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540413,337,607 - 13,344,789 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540413,337,607 - 13,344,789 (+)NCBIChiLan1.0ChiLan1.0
OXGR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381396,985,713 - 96,994,730 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1396,985,713 - 96,994,730 (-)EnsemblGRCh38hg38GRCh38
GRCh371397,637,967 - 97,646,984 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361396,435,974 - 96,444,605 (-)NCBINCBI36hg18NCBI36
Build 341396,435,973 - 96,444,605NCBI
Celera1378,485,394 - 78,494,031 (-)NCBI
Cytogenetic Map13q32.1NCBI
HuRef1378,234,827 - 78,243,464 (-)NCBIHuRef
CHM1_11397,608,350 - 97,616,984 (-)NCBICHM1_1
T2T-CHM13v2.01396,189,803 - 96,198,827 (-)NCBI
Oxgr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914120,256,997 - 120,279,847 (-)NCBIGRCm39mm39
GRCm39 Ensembl14120,256,997 - 120,279,847 (-)Ensembl
GRCm3814120,019,585 - 120,042,435 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14120,019,585 - 120,042,435 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714120,418,807 - 120,441,657 (-)NCBIGRCm37mm9NCBIm37
MGSCv3614119,154,767 - 119,177,617 (-)NCBImm8
Celera14118,578,849 - 118,602,956 (-)NCBICelera
Cytogenetic Map14E4NCBI
Oxgr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21597,145,947 - 97,146,960 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1597,144,293 - 97,166,612 (-)Ensembl
Rnor_6.015105,399,596 - 105,422,559 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15105,401,695 - 105,402,708 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.015108,805,931 - 108,826,992 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.415105,089,715 - 105,090,728 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.115105,105,494 - 105,106,508 (-)NCBI
Celera1595,968,176 - 95,969,189 (-)NCBICelera
Cytogenetic Map15q24NCBI
OXGR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11397,302,555 - 97,311,307 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01378,145,794 - 78,154,555 (-)NCBIMhudiblu_PPA_v0panPan3
OXGR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12247,371,020 - 47,377,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2247,371,381 - 47,372,394 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2247,151,464 - 47,157,881 (-)NCBI
ROS_Cfam_1.02247,796,855 - 47,803,273 (-)NCBI
ROS_Cfam_1.0 Ensembl2247,797,255 - 47,798,268 (-)Ensembl
UMICH_Zoey_3.12247,460,735 - 47,467,152 (-)NCBI
UNSW_CanFamBas_1.02247,493,049 - 47,499,466 (-)NCBI
UU_Cfam_GSD_1.02247,529,906 - 47,536,325 (-)NCBI
Oxgr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945182,902,647 - 182,904,237 (-)NCBI
SpeTri2.0NW_00493647213,047,918 - 13,049,041 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OXGR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11166,289,131 - 66,295,826 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
OXGR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1375,709,387 - 75,718,009 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl375,709,693 - 75,710,706 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604632,153,998 - 32,156,819 (-)NCBIVero_WHO_p1.0
Oxgr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248793,540,845 - 3,548,239 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046248793,540,737 - 3,548,239 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000008616   ⟹   ENSCLAP00000008489
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540413,337,607 - 13,344,789 (+)Ensembl
RefSeq Acc Id: XM_005374095   ⟹   XP_005374152
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540413,337,610 - 13,344,789 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013517055   ⟹   XP_013372509
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540413,337,607 - 13,344,789 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005374152 (Get FASTA)   NCBI Sequence Viewer  
  XP_013372509 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005374152   ⟸   XM_005374095
- Sequence:
RefSeq Acc Id: XP_013372509   ⟸   XM_013517055
- Sequence:
RefSeq Acc Id: ENSCLAP00000008489   ⟸   ENSCLAT00000008616
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005936 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000008489 ENTREZGENE
  ENSCLAP00000008489.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000008616 ENTREZGENE
  ENSCLAT00000008616.1 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene Oxgr1 ENTREZGENE
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
UniProt A0A8C2V443_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Oxgr1  oxoglutarate receptor 1    oxoglutarate (alpha-ketoglutarate) receptor 1  Symbol and/or name change 5135510 APPROVED