Zdhhc17 (zinc finger DHHC-type palmitoyltransferase 17) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Zdhhc17 (zinc finger DHHC-type palmitoyltransferase 17) Chinchilla lanigera
Analyze
Symbol: Zdhhc17
Name: zinc finger DHHC-type palmitoyltransferase 17
RGD ID: 8916163
Description: ENCODES a protein that exhibits identical protein binding (ortholog); palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN axonogenesis (ortholog); lipoprotein transport (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN aggresome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: palmitoyltransferase ZDHHC17; zinc finger DHHC-type containing 17; zinc finger, DHHC-type containing 17
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540515,915,756 - 15,997,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540515,915,756 - 15,997,777 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Zdhhc17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540515,915,756 - 15,997,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540515,915,756 - 15,997,777 (+)NCBIChiLan1.0ChiLan1.0
ZDHHC17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1276,764,103 - 76,853,696 (+)EnsemblGRCh38hg38GRCh38
GRCh381276,764,115 - 76,853,701 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371277,157,895 - 77,247,481 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361275,681,985 - 75,771,605 (+)NCBINCBI36hg18NCBI36
Build 341275,659,835 - 75,749,942NCBI
Celera1276,823,537 - 76,912,998 (+)NCBI
Cytogenetic Map12q21.2NCBI
HuRef1274,210,859 - 74,300,399 (+)NCBIHuRef
CHM1_11277,123,422 - 77,213,014 (+)NCBICHM1_1
Zdhhc17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910110,777,640 - 110,848,587 (-)NCBIGRCm39mm39
GRCm39 Ensembl10110,777,641 - 110,846,001 (-)Ensembl
GRCm3810110,941,779 - 111,010,066 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10110,941,780 - 111,010,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710110,378,835 - 110,447,122 (-)NCBIGRCm37mm9NCBIm37
MGSCv3610110,347,147 - 110,414,118 (-)NCBImm8
Celera10112,871,081 - 112,938,382 (-)NCBICelera
Cytogenetic Map10D1NCBI
Zdhhc17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2746,369,963 - 46,433,691 (-)NCBI
Rnor_6.0 Ensembl753,653,116 - 53,714,879 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0753,651,529 - 53,715,007 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0753,662,715 - 53,726,527 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4749,933,342 - 49,995,838 (-)NCBIRGSC3.4rn4RGSC3.4
Celera743,177,128 - 43,238,754 (-)NCBICelera
Cytogenetic Map7q22NCBI
ZDHHC17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11277,132,723 - 77,222,514 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1277,132,723 - 77,222,509 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01274,281,716 - 74,371,885 (+)NCBIMhudiblu_PPA_v0panPan3
ZDHHC17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11519,631,719 - 19,727,089 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1519,499,445 - 19,724,341 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1520,122,502 - 20,265,878 (+)NCBI
ROS_Cfam_1.01519,977,362 - 20,120,795 (+)NCBI
UMICH_Zoey_3.11519,577,052 - 19,720,418 (+)NCBI
UNSW_CanFamBas_1.01519,634,946 - 19,778,238 (+)NCBI
UU_Cfam_GSD_1.01519,763,733 - 19,907,136 (+)NCBI
Zdhhc17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494540,675,912 - 40,768,530 (-)NCBI
SpeTri2.0NW_0049365684,959,796 - 5,052,254 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl5104,300,872 - 104,395,288 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.15104,300,869 - 104,394,255 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.25109,481,712 - 109,553,113 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11172,341,708 - 72,431,178 (+)NCBI
ChlSab1.1 Ensembl1172,342,335 - 72,431,675 (+)Ensembl
Vero_WHO_p1.0NW_023666037173,112,637 - 173,202,071 (-)NCBI
Zdhhc17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475021,224,049 - 21,309,089 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000016335   ⟹   ENSCLAP00000016171
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540515,915,756 - 15,997,777 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000016336   ⟹   ENSCLAP00000016172
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540515,915,756 - 15,955,331 (+)Ensembl
RefSeq Acc Id: XM_005374347   ⟹   XP_005374404
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540515,915,756 - 15,997,777 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005374404 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005374404   ⟸   XM_005374347
- Sequence:
RefSeq Acc Id: ENSCLAP00000016172   ⟸   ENSCLAT00000016336
RefSeq Acc Id: ENSCLAP00000016171   ⟸   ENSCLAT00000016335


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011124 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000016171 ENTREZGENE
Ensembl Transcript ENSCLAT00000016335 ENTREZGENE
NCBI Gene Zdhhc17 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-22 Zdhhc17  zinc finger DHHC-type palmitoyltransferase 17  Zdhhc17  zinc finger DHHC-type containing 17  Symbol and/or name change 5135510 APPROVED
2016-08-03 Zdhhc17  zinc finger DHHC-type containing 17    zinc finger, DHHC-type containing 17  Symbol and/or name change 5135510 APPROVED