ZDHHC17 (zinc finger DHHC-type palmitoyltransferase 17) - Rat Genome Database

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Gene: ZDHHC17 (zinc finger DHHC-type palmitoyltransferase 17) Pan paniscus
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Symbol: ZDHHC17
Name: zinc finger DHHC-type palmitoyltransferase 17
RGD ID: 11702144
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); identical protein binding (inferred); palmitoyltransferase activity (inferred); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); protein palmitoylation (ortholog); ASSOCIATED WITH Huntington's disease (ortholog); FOUND IN glutamatergic synapse (ortholog); perforant pathway to dendrate granule cell synapse (ortholog); postsynaptic Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: palmitoyltransferase ZDHHC17; zinc finger DHHC-type containing 17
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21084,801,702 - 84,891,322 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11284,798,140 - 84,887,713 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01274,281,716 - 74,371,885 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11277,132,723 - 77,222,514 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1277,132,723 - 77,222,509 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ZDHHC17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21084,801,702 - 84,891,322 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11284,798,140 - 84,887,713 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01274,281,716 - 74,371,885 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11277,132,723 - 77,222,514 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1277,132,723 - 77,222,509 (+)Ensemblpanpan1.1panPan2
ZDHHC17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381276,764,115 - 76,853,701 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1276,764,103 - 76,853,696 (+)EnsemblGRCh38hg38GRCh38
GRCh371277,157,895 - 77,247,481 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361275,681,985 - 75,771,605 (+)NCBINCBI36Build 36hg18NCBI36
Build 341275,659,835 - 75,749,942NCBI
Celera1276,823,537 - 76,912,998 (+)NCBICelera
Cytogenetic Map12q21.2NCBI
HuRef1274,210,859 - 74,300,399 (+)NCBIHuRef
CHM1_11277,123,422 - 77,213,014 (+)NCBICHM1_1
T2T-CHM13v2.01276,742,025 - 76,831,585 (+)NCBIT2T-CHM13v2.0
Zdhhc17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910110,777,640 - 110,848,587 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10110,777,641 - 110,846,001 (-)EnsemblGRCm39 Ensembl
GRCm3810110,941,779 - 111,010,066 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10110,941,780 - 111,010,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710110,378,835 - 110,447,122 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610110,347,147 - 110,414,118 (-)NCBIMGSCv36mm8
Celera10112,871,081 - 112,938,382 (-)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1057.86NCBI
Zdhhc17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8748,256,269 - 48,320,000 (-)NCBIGRCr8
mRatBN7.2746,369,963 - 46,433,691 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl746,369,988 - 46,433,764 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx748,271,200 - 48,333,114 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0750,474,329 - 50,536,243 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0750,252,059 - 50,313,974 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0753,651,529 - 53,715,007 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl753,653,116 - 53,714,879 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0753,662,715 - 53,726,527 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4749,933,342 - 49,995,838 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera743,177,128 - 43,238,754 (-)NCBICelera
Cytogenetic Map7q22NCBI
Zdhhc17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540515,915,756 - 15,997,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540515,915,756 - 15,997,777 (+)NCBIChiLan1.0ChiLan1.0
ZDHHC17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11519,631,719 - 19,727,089 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1519,499,445 - 19,724,341 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1520,122,502 - 20,265,878 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01519,977,362 - 20,120,795 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1519,977,325 - 20,066,267 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11519,577,052 - 19,720,418 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01519,634,946 - 19,778,238 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01519,763,733 - 19,907,136 (+)NCBIUU_Cfam_GSD_1.0
Zdhhc17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494540,675,912 - 40,768,530 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365684,959,790 - 5,052,245 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365684,959,796 - 5,052,254 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl5104,300,876 - 104,394,260 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.15104,300,869 - 104,394,255 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.25109,481,712 - 109,553,113 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11172,341,708 - 72,431,178 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1172,342,335 - 72,431,675 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037173,112,637 - 173,202,071 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475021,225,768 - 21,308,927 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475021,224,049 - 21,309,089 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000036611   ⟹   ENSPPAP00000013936
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1277,132,723 - 77,222,509 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000036618   ⟹   ENSPPAP00000013943
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1277,133,403 - 77,189,928 (+)Ensembl
RefSeq Acc Id: XM_003832880   ⟹   XP_003832928
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21084,801,702 - 84,891,322 (+)NCBI
NHGRI_mPanPan11284,798,140 - 84,887,713 (+)NCBI
Mhudiblu_PPA_v01274,281,716 - 74,371,885 (+)NCBI
PanPan1.11277,132,723 - 77,222,514 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008958352   ⟹   XP_008956600
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21084,801,776 - 84,891,322 (+)NCBI
NHGRI_mPanPan11284,798,165 - 84,887,713 (+)NCBI
Mhudiblu_PPA_v01274,282,341 - 74,371,885 (+)NCBI
PanPan1.11277,133,250 - 77,220,202 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034936261   ⟹   XP_034792152
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21084,815,299 - 84,891,322 (+)NCBI
NHGRI_mPanPan11284,812,565 - 84,887,713 (+)NCBI
Mhudiblu_PPA_v01274,299,280 - 74,371,885 (+)NCBI
RefSeq Acc Id: XM_034936262   ⟹   XP_034792153
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21084,802,454 - 84,891,322 (+)NCBI
NHGRI_mPanPan11284,798,845 - 84,887,713 (+)NCBI
Mhudiblu_PPA_v01274,283,014 - 74,371,885 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003832928 (Get FASTA)   NCBI Sequence Viewer  
  XP_008956600 (Get FASTA)   NCBI Sequence Viewer  
  XP_034792152 (Get FASTA)   NCBI Sequence Viewer  
  XP_034792153 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000013936.1
  ENSPPAP00000013943.1
RefSeq Acc Id: XP_003832928   ⟸   XM_003832880
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AAL1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008956600   ⟸   XM_008958352
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_034792153   ⟸   XM_034936262
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034792152   ⟸   XM_034936261
- Peptide Label: isoform X2
Ensembl Acc Id: ENSPPAP00000013943   ⟸   ENSPPAT00000036618
Ensembl Acc Id: ENSPPAP00000013936   ⟸   ENSPPAT00000036611
Protein Domains
Palmitoyltransferase DHHC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030097 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036611.1 UniProtKB/TrEMBL
  ENSPPAT00000036618.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Palmitoyltrfase_DHHC UniProtKB/TrEMBL
KEGG Report pps:100995630 UniProtKB/TrEMBL
NCBI Gene ZDHHC17 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  PTHR24161:SF18 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  DHHC UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  DHHC UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
UniProt A0A2R9AAL1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AEJ6_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-22 ZDHHC17  zinc finger DHHC-type palmitoyltransferase 17  ZDHHC17  zinc finger DHHC-type containing 17  Symbol and/or name change 5135510 APPROVED