Lrrc28 (leucine rich repeat containing 28)

Gene: Lrrc28 (leucine rich repeat containing 28) Chinchilla lanigera

Analyze

Symbol:

Lrrc28

Name:

leucine rich repeat containing 28

RGD ID:

8894317

Description:

ASSOCIATED WITH chromosome 15q26-qter deletion syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

leucine-rich repeat-containing protein 28

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	26,668,712 - 26,789,756 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	26,668,712 - 26,786,945 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 15q26-qter deletion syndrome (ISO)

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Lrrc28
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	26,668,712 - 26,789,756 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	26,668,712 - 26,786,945 (+)	NCBI	ChiLan1.0	ChiLan1.0

LRRC28
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	99,251,481 - 99,390,729 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	99,251,362 - 99,390,729 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	99,791,686 - 99,930,934 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	97,609,175 - 97,744,021 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	97,609,174 - 97,744,019	NCBI
Celera	15	76,210,623 - 76,345,463 (+)	NCBI		Celera
Cytogenetic Map	15	q26.3	NCBI
HuRef	15	75,921,210 - 76,056,082 (+)	NCBI		HuRef
CHM1_1	15	99,632,991 - 99,767,827 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	97,015,255 - 97,154,521 (+)	NCBI		T2T-CHM13v2.0

Lrrc28
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	67,163,158 - 67,295,084 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	67,163,158 - 67,295,016 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	67,513,410 - 67,645,336 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	67,513,410 - 67,645,268 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	74,658,296 - 74,790,122 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	67,386,924 - 67,518,744 (-)	NCBI		MGSCv36	mm8
Celera	7	64,964,592 - 65,097,151 (-)	NCBI		Celera
Cytogenetic Map	7	C	NCBI
cM Map	7	37.05	NCBI

Lrrc28
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	130,526,757 - 130,655,991 (-)	NCBI		GRCr8
mRatBN7.2	1	121,116,833 - 121,245,805 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	121,127,733 - 121,245,784 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	129,124,385 - 129,242,385 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	136,294,487 - 136,412,487 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	129,095,526 - 129,213,432 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	128,486,164 - 128,604,190 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	128,486,166 - 128,604,188 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	129,551,866 - 129,669,856 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	122,267,092 - 122,385,096 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	122,347,069 - 122,459,683 (-)	NCBI
Celera	1	113,328,005 - 113,446,042 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

LRRC28
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	88,794,360 - 88,931,171 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	92,491,255 - 92,628,095 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	77,932,476 - 78,069,106 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	97,116,775 - 97,250,570 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	97,117,104 - 97,250,570 (+)	Ensembl	panpan1.1		panPan2

LRRC28
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	41,337,328 - 41,496,747 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	41,337,328 - 41,496,755 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	44,036,548 - 44,195,470 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	41,740,783 - 41,801,657 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	3	41,270,328 - 41,429,400 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	41,501,328 - 41,660,330 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	41,721,599 - 41,880,722 (-)	NCBI		UU_Cfam_GSD_1.0

Lrrc28
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	142,070,397 - 142,205,240 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936483	4,131,749 - 4,264,012 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936483	4,131,900 - 4,264,019 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LRRC28
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	137,998,554 - 138,203,466 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	137,998,540 - 138,194,848 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	154,171,005 - 154,364,407 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LRRC28
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	17,841,731 - 17,971,267 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	17,841,855 - 17,971,532 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	28,596,299 - 28,724,883 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lrrc28
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624768	4,982,020 - 5,105,019 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624768	4,984,515 - 5,105,162 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005381627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005381628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013512542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01017602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01017603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01017604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01017605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01002081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000014852 ⟹ ENSCLAP00000014693

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955416	26,668,712 - 26,789,756 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000014853 ⟹ ENSCLAP00000014694

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955416	26,668,730 - 26,789,756 (+)	Ensembl

RefSeq Acc Id:

XM_005381627 ⟹ XP_005381684

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	26,668,712 - 26,786,945 (+)	NCBI

Sequence:

show sequence

TTGTTATTCTCTTTATAGAAATGGACCAGTTTTGATAAAATGTAGTACTCCAGCATGCCTGACG
GGATATGTTCAGTCATGGCTTCCGAACTTTGCAAGACGATTTCTGTGGCAAGGCTTGAAAAGCA
CAAGAATCTGTTCTTAAATTATAGGAACCTGCAGCATTTCCCACTGGAGTTACTGAAAGGTGAA
GGCCTGCAGTACTTGGAGAGGCTCTATATGAAAAGGAACTCCCTTACAACCTTGCCAGAAAACC
TTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTTCATTCAAATAACATAGTTGTAGTTCC
GGAAGCTATCGGGTCCCTTGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAAATT
GTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAACAACCAGCTGC
AATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCG
TTTGCTAACTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGC
AACCGGCTATGGCATGTGCCTCGCCACCTCTGCCAGCTGCCCAGCCTCAACGAGCTCTCCATGG
CTGGAAACCGTCTCGCATTTCTGCCCCTCGATCTAGGTCGATCTCGAGAACTACAGTACGTGTA
CGTGGATAACAACATTCACCTGAAAGGGCTGCCGTCATACCTATACAACAAAGTCATCGGGTGC
AGTGGCTGTGGGGCCCCCATCCAGGTGTCGGAGGTGAAGCTGCTCTCCTTTTCATCGGGGCAGC
TGACCGTCTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCGCGACCACGTGCTGCCTCT
GCAAGAGCTGGCCATGCGGGGTCTCTATCGCACCTGTCACCACTTCCTCAAAGATTTGAACTCG
CTGTCTCCCATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCGCTGTCCCCTGGGGCACTGTC
ACCGGTGTAGTGAGCCCATGTTTACCATCGTCTACCCCAAGCTCTTCCCCTTGAGAGAGACGCC
AATGGCAGGGCTGCACCAGGGGAGGACAACAGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAG
TGTCTGCAGACTTTCGACCTGCTGAGTTGATAAACACTCATGAGCCTCAGGAGTGCTGCCAGCT
TGCTGCTGCGGCCACCTCCCTGCGTGTCAGGCGCTGCGTGCGCCAGGCGGGAGAGTCCTGCGGG
CTGGAATAGGCGCTTCCATCCTGTCCCGTGCAACACGGGGCCGCAAGAGCTCTCTGGAAGTGTG
ATCGGGCGTCACAGCCGAAATGCCTTCACCCTCCTCACGAGTCAGAATACATCCTCCCCCCAAA
CTAA

hide sequence

RefSeq Acc Id:

XM_005381628 ⟹ XP_005381685

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	26,668,712 - 26,786,945 (+)	NCBI

Sequence:

show sequence

TTGTTATTCTCTTTATAGAAATGGACCAGTTTTGATAAAATGTAGTACTCCAGCATGCCTGACG
GGATATGTTCAGTCATGGCTTCCGAACTTTGCAAGACGATTTCTGTGGCAAGGCTTGAAAAGCA
CAAGAATCTGTTCTTAAATTATAGGAACCTGCAGCATTTCCCACTGGAGTTACTGAAAGGTGAA
GGCCTGCAGTACTTGGAGAGGCTCTATATGAAAAGGAACTCCCTTACAACCTTGCCAGAAAACC
TTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTTCATTCAAATAACATAGTTGTAGTTCC
GGAAGCTATCGGGTCCCTTGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAAATT
GTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAACAACCAGCTGC
AATTCCTACCTCCAGATCTAGGTCGATCTCGAGAACTACAGTACGTGTACGTGGATAACAACAT
TCACCTGAAAGGGCTGCCGTCATACCTATACAACAAAGTCATCGGGTGCAGTGGCTGTGGGGCC
CCCATCCAGGTGTCGGAGGTGAAGCTGCTCTCCTTTTCATCGGGGCAGCTGACCGTCTTCCTCC
CAGCTGAGGTGAAGGCCATAGGGACGGAGCGCGACCACGTGCTGCCTCTGCAAGAGCTGGCCAT
GCGGGGTCTCTATCGCACCTGTCACCACTTCCTCAAAGATTTGAACTCGCTGTCTCCCATCTCA
TTACCCAGAAGTCTCCTGGAGCTGCTGCGCTGTCCCCTGGGGCACTGTCACCGGTGTAGTGAGC
CCATGTTTACCATCGTCTACCCCAAGCTCTTCCCCTTGAGAGAGACGCCAATGGCAGGGCTGCA
CCAGGGGAGGACAACAGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTC
GACCTGCTGAGTTGATAAACACTCATGAGCCTCAGGAGTGCTGCCAGCTTGCTGCTGCGGCCAC
CTCCCTGCGTGTCAGGCGCTGCGTGCGCCAGGCGGGAGAGTCCTGCGGGCTGGAATAGGCGCTT
CCATCCTGTCCCGTGCAACACGGGGCCGCAAGAGCTCTCTGGAAGTGTGATCGGGCGTCACAGC
CGAAATGCCTTCACCCTCCTCACGAGTCAGAATACATCCTCCCCCCAAACTAA

hide sequence

RefSeq Acc Id:

XM_013512542 ⟹ XP_013367996

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	26,668,712 - 26,786,945 (+)	NCBI

Sequence:

show sequence

TTGTTATTCTCTTTATAGAAATGGACCAGTTTTGATAAAATGTAGTACTCCAGCATGCCTGACG
GGATATGTTCAGTCATGGCTTCCGAACTTTGCAAGACGATTTCTGTGGCAAGGCTTGAAAAGCA
CAAGAATCTGTTCTTAAATTATAGGAACCTGCAGCATTTCCCACTGGAGTTACTGAAAGGTGAA
GGCCTGCAGTACTTGGAGAGGCTCTATATGAAAAGGAACTCCCTTACAACCTTGCCAGAAAACC
TTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTTCATTCAAATAACATAGTTGTAGTTCC
GGAAGCTATCGGGTCCCTTGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAAATT
GTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAACAACCAGCTGC
AATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCG
TTTGCTAACTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGC
AACCGGCTATGGCATGTGCCTCGCCACCTCTGCCAGCTGCCCAGCCTCAACGAGCTCTCCATGG
CTGGAAACCGTCTCGCATTTCTGCCCCTCGATCTAGGTCGATCTCGAGAACTACAGTACGTGTA
CGTGGATAACAACATTCACCTGAAAGGGCTGCCGTCATACCTATACAACAAAGTCATCGGGTGC
AGTGGCTGTGGGGCCCCCATCCAGGTGTCGGAGGTGAAGCTGCTCTCCTTTTCATCGGGGCAGC
TGACCGTCTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCGCGACCACGTGCTGCCTCT
GCAAGAGCTGGCCATGCGGGGTCTCTATCGCACCTGTCACCACTTCCTCAAAGGAGGACAACAG
TTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTCGACCTGCTGAGTTGATA
AACACTCATGAGCCTCAGGAGTGCTGCCAGCTTGCTGCTGCGGCCACCTCCCTGCGTGTCAGGC
GCTGCGTGCGCCAGGCGGGAGAGTCCTGCGGGCTGGAATAGGCGCTTCCATCCTGTCCCGTGCA
ACACGGGGCCGCAAGAGCTCTCTGGAAGTGTGATCGGGCGTCACAGCCGAAATGCCTTCACCCT
CCTCACGAGTCAGAATACATCCTCCCCCCAAACTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005381684	(Get FASTA)	NCBI Sequence Viewer
	XP_005381685	(Get FASTA)	NCBI Sequence Viewer
	XP_013367996	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000014693
	ENSCLAP00000014693.1
	ENSCLAP00000014694
	ENSCLAP00000014694.1

RefSeq Acc Id:	XP_005381684 ⟸ XM_005381627
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VH10 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPDGICSVMASELCKTISVARLEKHKNLFLNYRNLQHFPLELLKGEGLQYLERLYMKRNSLTTL PENLAQKLPNLVELYLHSNNIVVVPEAIGSLVKLQCLDLSDNALEIVCPEIGRLRALRHLRLAN NQLQFLPPEVGDLKELQTLDISTNRLLTLPERLHLCLSLQYLTVDRNRLWHVPRHLCQLPSLNE LSMAGNRLAFLPLDLGRSRELQYVYVDNNIHLKGLPSYLYNKVIGCSGCGAPIQVSEVKLLSFS SGQLTVFLPAEVKAIGTERDHVLPLQELAMRGLYRTCHHFLKDLNSLSPISLPRSLLELLRCPL GHCHRCSEPMFTIVYPKLFPLRETPMAGLHQGRTTVSFVAYCCSTQCLQTFDLLS hide sequence

RefSeq Acc Id:	XP_005381685 ⟸ XM_005381628
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VJ57 (UniProtKB/TrEMBL), A0A8C2VH10 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPDGICSVMASELCKTISVARLEKHKNLFLNYRNLQHFPLELLKGEGLQYLERLYMKRNSLTTL PENLAQKLPNLVELYLHSNNIVVVPEAIGSLVKLQCLDLSDNALEIVCPEIGRLRALRHLRLAN NQLQFLPPDLGRSRELQYVYVDNNIHLKGLPSYLYNKVIGCSGCGAPIQVSEVKLLSFSSGQLT VFLPAEVKAIGTERDHVLPLQELAMRGLYRTCHHFLKDLNSLSPISLPRSLLELLRCPLGHCHR CSEPMFTIVYPKLFPLRETPMAGLHQGRTTVSFVAYCCSTQCLQTFDLLS hide sequence

RefSeq Acc Id:

XP_013367996 ⟸ XM_013512542

- Peptide Label:

isoform X3

- Sequence:

show sequence

MPDGICSVMASELCKTISVARLEKHKNLFLNYRNLQHFPLELLKGEGLQYLERLYMKRNSLTTL
PENLAQKLPNLVELYLHSNNIVVVPEAIGSLVKLQCLDLSDNALEIVCPEIGRLRALRHLRLAN
NQLQFLPPEVGDLKELQTLDISTNRLLTLPERLHLCLSLQYLTVDRNRLWHVPRHLCQLPSLNE
LSMAGNRLAFLPLDLGRSRELQYVYVDNNIHLKGLPSYLYNKVIGCSGCGAPIQVSEVKLLSFS
SGQLTVFLPAEVKAIGTERDHVLPLQELAMRGLYRTCHHFLKGGQQLVLWLTAAPPSVCRLSTC

hide sequence

RefSeq Acc Id:

ENSCLAP00000014693 ⟸ ENSCLAT00000014852

RefSeq Acc Id:

ENSCLAP00000014694 ⟸ ENSCLAT00000014853

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000010143	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000014852	ENTREZGENE
	ENSCLAT00000014852.1	UniProtKB/TrEMBL
	ENSCLAT00000014853	ENTREZGENE
	ENSCLAT00000014853.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Lrrc28	ENTREZGENE
PANTHER	PTHR48051	UniProtKB/TrEMBL
	ZGC:77287	UniProtKB/TrEMBL
Pfam	LRR_1	UniProtKB/TrEMBL
	LRR_8	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/TrEMBL
SMART	LRR_BAC	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
UniProt	A0A8C2VH10	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VJ57	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD