LRRC28 (leucine rich repeat containing 28) - Rat Genome Database

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Gene: LRRC28 (leucine rich repeat containing 28) Canis lupus familiaris
Analyze
Symbol: LRRC28
Name: leucine rich repeat containing 28
RGD ID: 12154034
Description: ASSOCIATED WITH chromosome 15q26-qter deletion syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: leucine-rich repeat-containing protein 28
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1341,337,328 - 41,496,747 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl341,337,328 - 41,496,755 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha344,036,548 - 44,195,470 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0341,740,783 - 41,801,657 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1341,270,328 - 41,429,400 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0341,501,328 - 41,660,330 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0341,721,599 - 41,880,722 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
LRRC28
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1341,337,328 - 41,496,747 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl341,337,328 - 41,496,755 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha344,036,548 - 44,195,470 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0341,740,783 - 41,801,657 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1341,270,328 - 41,429,400 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0341,501,328 - 41,660,330 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0341,721,599 - 41,880,722 (-)NCBIUU_Cfam_GSD_1.0
LRRC28
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381599,251,481 - 99,390,729 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1599,251,362 - 99,390,729 (+)EnsemblGRCh38hg38GRCh38
GRCh371599,791,686 - 99,930,934 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361597,609,175 - 97,744,021 (+)NCBINCBI36Build 36hg18NCBI36
Build 341597,609,174 - 97,744,019NCBI
Celera1576,210,623 - 76,345,463 (+)NCBICelera
Cytogenetic Map15q26.3NCBI
HuRef1575,921,210 - 76,056,082 (+)NCBIHuRef
CHM1_11599,632,991 - 99,767,827 (+)NCBICHM1_1
T2T-CHM13v2.01597,015,255 - 97,154,521 (+)NCBIT2T-CHM13v2.0
Lrrc28
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39767,163,158 - 67,295,084 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl767,163,158 - 67,295,016 (-)EnsemblGRCm39 Ensembl
GRCm38767,513,410 - 67,645,336 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl767,513,410 - 67,645,268 (-)EnsemblGRCm38mm10GRCm38
MGSCv37774,658,296 - 74,790,122 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36767,386,924 - 67,518,744 (-)NCBIMGSCv36mm8
Celera764,964,592 - 65,097,151 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map737.05NCBI
Lrrc28
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81130,526,757 - 130,655,991 (-)NCBIGRCr8
mRatBN7.21121,116,833 - 121,245,805 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1121,127,733 - 121,245,784 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1129,124,385 - 129,242,385 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01136,294,487 - 136,412,487 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01129,095,526 - 129,213,432 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01128,486,164 - 128,604,190 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1128,486,166 - 128,604,188 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01129,551,866 - 129,669,856 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41122,267,092 - 122,385,096 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11122,347,069 - 122,459,683 (-)NCBI
Celera1113,328,005 - 113,446,042 (-)NCBICelera
Cytogenetic Map1q22NCBI
Lrrc28
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541626,668,712 - 26,789,756 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541626,668,712 - 26,786,945 (+)NCBIChiLan1.0ChiLan1.0
LRRC28
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21688,794,360 - 88,931,171 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11592,491,255 - 92,628,095 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01577,932,476 - 78,069,106 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11597,116,775 - 97,250,570 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1597,117,104 - 97,250,570 (+)Ensemblpanpan1.1panPan2
Lrrc28
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640142,070,397 - 142,205,240 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364834,131,749 - 4,264,012 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364834,131,900 - 4,264,019 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LRRC28
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1137,998,554 - 138,203,466 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11137,998,540 - 138,194,848 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21154,171,005 - 154,364,407 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LRRC28
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12917,841,731 - 17,971,267 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2917,841,855 - 17,971,532 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605928,596,299 - 28,724,883 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lrrc28
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247684,982,020 - 5,105,019 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247684,984,515 - 5,105,162 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LRRC28
1570 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 4 6 6 6 8 8 10 6
Low 2 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005618305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000017191   ⟹   ENSCAFP00000015907
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl341,337,431 - 41,496,683 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000062097   ⟹   ENSCAFP00000062361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl341,337,328 - 41,496,683 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000081212   ⟹   ENSCAFP00000060558
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl341,337,567 - 41,496,755 (-)Ensembl
RefSeq Acc Id: XM_005618305   ⟹   XP_005618362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,496,747 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,195,470 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112394   ⟹   XP_013967869
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,496,747 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,195,470 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022416865   ⟹   XP_022272573
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,496,396 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,195,131 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022416866   ⟹   XP_022272574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,495,296 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,194,023 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022416867   ⟹   XP_022272575
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,495,374 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,194,101 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022416868   ⟹   XP_022272576
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,496,443 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,195,174 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022416870   ⟹   XP_022272578
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1341,337,328 - 41,496,741 (-)NCBI
Dog10K_Boxer_Tasha344,036,548 - 44,195,464 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038471766   ⟹   XP_038327694
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,429,400 (-)NCBI
RefSeq Acc Id: XM_038471767   ⟹   XP_038327695
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,429,061 (-)NCBI
RefSeq Acc Id: XM_038471768   ⟹   XP_038327696
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,427,953 (-)NCBI
RefSeq Acc Id: XM_038471769   ⟹   XP_038327697
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,428,031 (-)NCBI
RefSeq Acc Id: XM_038471770   ⟹   XP_038327698
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,429,104 (-)NCBI
RefSeq Acc Id: XM_038471772   ⟹   XP_038327700
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,429,394 (-)NCBI
RefSeq Acc Id: XM_038471773   ⟹   XP_038327701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1341,270,328 - 41,429,400 (-)NCBI
RefSeq Acc Id: XM_038532693   ⟹   XP_038388621
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,880,722 (-)NCBI
RefSeq Acc Id: XM_038532694   ⟹   XP_038388622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,880,383 (-)NCBI
RefSeq Acc Id: XM_038532695   ⟹   XP_038388623
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,879,275 (-)NCBI
RefSeq Acc Id: XM_038532696   ⟹   XP_038388624
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,879,353 (-)NCBI
RefSeq Acc Id: XM_038532697   ⟹   XP_038388625
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,880,426 (-)NCBI
RefSeq Acc Id: XM_038532698   ⟹   XP_038388626
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,880,716 (-)NCBI
RefSeq Acc Id: XM_038532699   ⟹   XP_038388627
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0341,721,599 - 41,880,722 (-)NCBI
RefSeq Acc Id: XM_038597000   ⟹   XP_038452928
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,660,330 (-)NCBI
RefSeq Acc Id: XM_038597001   ⟹   XP_038452929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,659,991 (-)NCBI
RefSeq Acc Id: XM_038597002   ⟹   XP_038452930
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,658,883 (-)NCBI
RefSeq Acc Id: XM_038597003   ⟹   XP_038452931
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,658,961 (-)NCBI
RefSeq Acc Id: XM_038597004   ⟹   XP_038452932
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,660,034 (-)NCBI
RefSeq Acc Id: XM_038597005   ⟹   XP_038452933
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,660,324 (-)NCBI
RefSeq Acc Id: XM_038597006   ⟹   XP_038452934
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0341,501,328 - 41,660,330 (-)NCBI
RefSeq Acc Id: XM_038661209   ⟹   XP_038517137
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0341,740,783 - 41,801,657 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005618362 (Get FASTA)   NCBI Sequence Viewer  
  XP_013967869 (Get FASTA)   NCBI Sequence Viewer  
  XP_022272573 (Get FASTA)   NCBI Sequence Viewer  
  XP_022272574 (Get FASTA)   NCBI Sequence Viewer  
  XP_022272575 (Get FASTA)   NCBI Sequence Viewer  
  XP_022272576 (Get FASTA)   NCBI Sequence Viewer  
  XP_022272578 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327694 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327695 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327696 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327697 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327698 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327700 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327701 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388621 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388622 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388623 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388624 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388625 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388626 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388627 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452928 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452929 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452930 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452931 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452932 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452933 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452934 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517137 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000015907.4
  ENSCAFP00000060558.1
  ENSCAFP00000062361.1
  ENSCAFP00000071265.1
  ENSCAFP00000073213.1
  ENSCAFP00030001417.1
  ENSCAFP00030001446.1
  ENSCAFP00030001474.1
  ENSCAFP00030001484.1
  ENSCAFP00030001509.1
  ENSCAFP00030001528.1
  ENSCAFP00030001546.1
  ENSCAFP00040038478.1
  ENSCAFP00040038484.1
  ENSCAFP00040038497.1
  ENSCAFP00040038526.1
Reference Protein Sequences
RefSeq Acc Id: XP_013967869   ⟸   XM_014112394
- Peptide Label: isoform X21
- UniProtKB: A0A8C0M3B4 (UniProtKB/TrEMBL),   A0A8P0TRC8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005618362   ⟸   XM_005618305
- Peptide Label: isoform X17
- UniProtKB: A0A8C0TLR3 (UniProtKB/TrEMBL),   A0A8P0PL79 (UniProtKB/TrEMBL),   A0A8P0NCS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022272578   ⟸   XM_022416870
- Peptide Label: isoform X20
- UniProtKB: A0A8C0LYT9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022272576   ⟸   XM_022416868
- Peptide Label: isoform X19
- UniProtKB: A0A8C0LYT9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022272573   ⟸   XM_022416865
- Peptide Label: isoform X17
- UniProtKB: A0A8C0TLR3 (UniProtKB/TrEMBL),   A0A8P0PL79 (UniProtKB/TrEMBL),   A0A8P0NCS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022272575   ⟸   XM_022416867
- Peptide Label: isoform X18
- UniProtKB: A0A8C0LYT9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022272574   ⟸   XM_022416866
- Peptide Label: isoform X17
- UniProtKB: A0A8C0TLR3 (UniProtKB/TrEMBL),   A0A8P0PL79 (UniProtKB/TrEMBL),   A0A8P0NCS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000062361   ⟸   ENSCAFT00000062097
RefSeq Acc Id: ENSCAFP00000060558   ⟸   ENSCAFT00000081212
RefSeq Acc Id: ENSCAFP00000015907   ⟸   ENSCAFT00000017191
RefSeq Acc Id: XP_038327701   ⟸   XM_038471773
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038327694   ⟸   XM_038471766
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038327700   ⟸   XM_038471772
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038327698   ⟸   XM_038471770
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038327695   ⟸   XM_038471767
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038327697   ⟸   XM_038471769
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038327696   ⟸   XM_038471768
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038452934   ⟸   XM_038597006
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038452928   ⟸   XM_038597000
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038452933   ⟸   XM_038597005
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038452932   ⟸   XM_038597004
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038452929   ⟸   XM_038597001
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038452931   ⟸   XM_038597003
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038452930   ⟸   XM_038597002
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038517137   ⟸   XM_038661209
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L657 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388627   ⟸   XM_038532699
- Peptide Label: isoform X16
- UniProtKB: A0A8C0M3B4 (UniProtKB/TrEMBL),   A0A8P0TRC8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388621   ⟸   XM_038532693
- Peptide Label: isoform X12
- UniProtKB: A0A8C0TLR3 (UniProtKB/TrEMBL),   A0A8P0NCS8 (UniProtKB/TrEMBL),   A0A8P0PL79 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388626   ⟸   XM_038532698
- Peptide Label: isoform X15
- UniProtKB: A0A8C0LYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388625   ⟸   XM_038532697
- Peptide Label: isoform X14
- UniProtKB: A0A8C0LYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388622   ⟸   XM_038532694
- Peptide Label: isoform X12
- UniProtKB: A0A8C0TLR3 (UniProtKB/TrEMBL),   A0A8P0NCS8 (UniProtKB/TrEMBL),   A0A8P0PL79 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388624   ⟸   XM_038532696
- Peptide Label: isoform X13
- UniProtKB: A0A8C0LYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388623   ⟸   XM_038532695
- Peptide Label: isoform X12
- UniProtKB: A0A8C0TLR3 (UniProtKB/TrEMBL),   A0A8P0NCS8 (UniProtKB/TrEMBL),   A0A8P0PL79 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010811 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030000924 UniProtKB/TrEMBL
  ENSCAFG00040023671 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000017191.5 UniProtKB/TrEMBL
  ENSCAFT00000062097.2 UniProtKB/TrEMBL
  ENSCAFT00000081212.2 UniProtKB/TrEMBL
  ENSCAFT00000098896.1 UniProtKB/TrEMBL
  ENSCAFT00000100713.1 UniProtKB/TrEMBL
  ENSCAFT00030001592.1 UniProtKB/TrEMBL
  ENSCAFT00030001623.1 UniProtKB/TrEMBL
  ENSCAFT00030001653.1 UniProtKB/TrEMBL
  ENSCAFT00030001664.1 UniProtKB/TrEMBL
  ENSCAFT00030001694.1 UniProtKB/TrEMBL
  ENSCAFT00030001714.1 UniProtKB/TrEMBL
  ENSCAFT00030001737.1 UniProtKB/TrEMBL
  ENSCAFT00040044080.1 UniProtKB/TrEMBL
  ENSCAFT00040044086.1 UniProtKB/TrEMBL
  ENSCAFT00040044102.1 UniProtKB/TrEMBL
  ENSCAFT00040044133.1 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:479023 UniProtKB/TrEMBL
NCBI Gene LRRC28 ENTREZGENE
PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10B UniProtKB/TrEMBL
  LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 UniProtKB/TrEMBL
  PTHR48051 UniProtKB/TrEMBL
  ZGC:77287 UniProtKB/TrEMBL
Pfam LRR_1 UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
PROSITE LRR UniProtKB/TrEMBL
SMART LRR_BAC UniProtKB/TrEMBL
  LRR_TYP UniProtKB/TrEMBL
Superfamily-SCOP L domain-like UniProtKB/TrEMBL
UniProt A0A8C0L657 ENTREZGENE
  A0A8C0LTG9_CANLF UniProtKB/TrEMBL
  A0A8C0LTN4_CANLF UniProtKB/TrEMBL
  A0A8C0LYT9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0LYZ5_CANLF UniProtKB/TrEMBL
  A0A8C0M3B4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TLR3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TMJ7_CANLF UniProtKB/TrEMBL
  A0A8C0TMN8_CANLF UniProtKB/TrEMBL
  A0A8P0NCS8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PL79 ENTREZGENE
  A0A8P0TRC8 ENTREZGENE
UniProt Secondary A0A8P0P9L4 UniProtKB/TrEMBL
  A0A8P0PB62 UniProtKB/TrEMBL
  A0A8P0PL79 UniProtKB/TrEMBL
  A0A8P0TRC8 UniProtKB/TrEMBL
VGNC ID VGNC:42794 ENTREZGENE