Symbol:
Klhl40
Name:
kelch like family member 40
RGD ID:
8866063
Description:
INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A8 (ortholog); genetic disease (ortholog); nemaline myopathy 8 (ortholog); FOUND IN A band (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
kelch-like family member 40; kelch-like protein 40
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955420 28,117,898 - 28,122,270 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955420 28,117,553 - 28,122,391 (-) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Klhl40 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955420 28,117,898 - 28,122,270 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955420 28,117,553 - 28,122,391 (-) NCBI ChiLan1.0 ChiLan1.0
KLHL40 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 3 42,685,537 - 42,692,544 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 3 42,685,537 - 42,692,544 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 3 42,727,029 - 42,734,036 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 3 42,702,015 - 42,708,942 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 3 42,702,014 - 42,708,942 NCBI Celera 3 42,667,406 - 42,674,333 (+) NCBI Celera Cytogenetic Map 3 p22.1 NCBI HuRef 3 42,772,653 - 42,779,580 (+) NCBI HuRef CHM1_1 3 42,678,186 - 42,685,113 (+) NCBI CHM1_1 T2T-CHM13v2.0 3 42,703,548 - 42,710,555 (+) NCBI T2T-CHM13v2.0
Klhl40 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 121,606,673 - 121,612,885 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 121,606,673 - 121,612,884 (+) Ensembl GRCm39 Ensembl GRCm38 9 121,777,499 - 121,791,200 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 121,777,607 - 121,783,818 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 121,686,725 - 121,692,937 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 121,623,722 - 121,632,518 (+) NCBI MGSCv36 mm8 Celera 9 122,250,832 - 122,257,196 (+) NCBI Celera Cytogenetic Map 9 F4 NCBI cM Map 9 72.61 NCBI
Klhl40 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 130,318,793 - 130,324,309 (+) NCBI GRCr8 mRatBN7.2 8 121,441,285 - 121,446,801 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 121,441,287 - 121,446,800 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 127,040,450 - 127,045,966 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 125,239,517 - 125,245,033 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 123,068,719 - 123,074,236 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 130,416,265 - 130,421,871 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 130,416,355 - 130,421,871 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 129,596,172 - 129,601,706 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 8 127,153,472 - 127,159,307 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 8 127,173,602 - 127,178,958 (-) NCBI Celera 8 120,575,465 - 120,580,981 (+) NCBI Celera Cytogenetic Map 8 q32 NCBI
KLHL40 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 2 42,648,634 - 42,657,268 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 3 42,653,395 - 42,662,029 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 3 42,592,977 - 42,600,100 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 3 43,657,128 - 43,664,055 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 3 43,657,128 - 43,664,055 (+) Ensembl panpan1.1 panPan2
KLHL40 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 23 11,812,268 - 11,820,426 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 23 11,813,550 - 11,820,420 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 23 11,788,054 - 11,794,913 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 23 12,103,227 - 12,110,087 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 23 12,103,414 - 12,110,084 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 23 11,905,185 - 11,912,008 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 23 12,047,337 - 12,054,167 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 23 12,051,398 - 12,058,303 (+) NCBI UU_Cfam_GSD_1.0
Klhl40 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405118 200,063,283 - 200,072,287 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936695 2,414,573 - 2,424,702 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936695 2,417,938 - 2,424,622 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
KLHL40 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 13 26,202,677 - 26,211,522 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 13 26,202,607 - 26,211,528 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 13 28,863,095 - 28,876,907 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
KLHL40 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 22 4,141,759 - 4,149,158 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 22 4,142,192 - 4,148,710 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666041 163,051,860 - 163,059,265 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Klhl40 (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000024128 ⟹ ENSCLAP00000023902
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955420 28,117,898 - 28,122,270 (-) Ensembl
Ensembl Acc Id:
ENSCLAT00000024129 ⟹ ENSCLAP00000023903
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955420 28,117,898 - 28,122,270 (-) Ensembl
RefSeq Acc Id:
XM_005383531 ⟹ XP_005383588
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955420 28,117,553 - 28,122,391 (-) NCBI
Sequence:
GGACAGCTGCGCAGACTGAGCGCGGGCCGGCAGGGAAGCAGGGGTGCAGAGAGGAGCCCCGGCACCATCGCCGCACCCTAGGGTACGCTTGGCACCTTCGCTGCACTCCAAGGCACCCACCATGGCGC TGGGCTTGGAGCAGGCAGAAGAGCAGCGGCTATACCAGCAAACGCTGCTGCAGGACGGGCTCAAGGACATGCTGGACCACGGCAAGTTTCTGGACTGCGTGGTGCGCGCGGGGGAGCGCGAGTTCCCG TGCCACCGCCTGGTGCTGGCCGCCTGCAGCCCCTATTTCCGCGCGCGCTTCCTGGCCGAGCCCGAGAGCGCAGGCGAGGTGCGCCTGGAGGAGGTGTCGCCAGACGTGGTGGGCCAGGTGCTGCACTA CCTGTACACGTCGGAGATCGCGCTGGACGAGGCGAGCGTGCAGGACCTGTTCGCCGCGGCGCACCGCTTCCAGATCCCGTCCATCTTCACCATCTGCGTGTCCTTCCTGCAGAAGCGCCTGTGCCTCG CCAACTGCCTGGCCGTGTTCCGCCTCGGCCTCCTGCTGGACTGCGCGCGCCTGGCCGTGGCCGCGCGCGACTTCATCTGCGCGCGCTTCTCGCTGGTGGCGCGCGACGCCGACTTCCTGGGGCTCTCG GCGGACGAGCTCATCGCCATCATCTCCAGCGACGGCCTCAACGTGGAGAAGGAGGAGGCGGTGTTCGAGGCGGTGATGCGCTGGGCGGAGAGCGGCGACGCTGAGGCCCGCGCCGAGCGCCAGCGCGC GCTGCCCACGGTGTTCGAGAGCGTGCGCTTTCGCCTGCTGCCGCGCGCCTTCCTGGAGACCCGCGTGGCGCGGCACCCGCTGGTGCGCGCCCAGCCCGAGCTGCTGCGCAAGGTGCAGATGGTGAAGG ACGCGCACGAGGGCCGCGTGACCACGCTGCGCCGGAAGAGGCGGGACCAGGGCCAGGAGAAGGGGGCGGAGCAGAGTGCCGCCCCGGAAGAGGCCCGGGCCCGGGCGCCGGCGGCGGAGGAAGAGGAC GGAGAGGCCGCCGAGCGCGTGCTGCCCGGCGTCCTGAACGACACGCTGCGCTTCGGCATGTTCCTGCAGGACCTCATCTTCATGATCAGCGAGGAGGGCGCGGTGGCCTACGACCCCGTCGCCAACGA GTGCTACTGCGCCTCCCTTTCCGCACAGGTCCCCAAGAACCACGTGAGCCTGGTCACCAAGGAGAACCAGGTCTTCGTGGCCGGGGGCCTCTTCTACAACGAGGACAACAAGGAGGACCCCATGAGTG CTTACTTCCTGCAGTTCGACCACCTGGACTCGGAGTGGCTGGGCATGCCGCCGCTGCCCTCGCCTCGCTGCCTCTTCGGCCTGGGAGAGGCGCTCAACGCCATCTACGTGGTCGGCGGCCGCGAGCTC AAGGACGGCGAGCACAGCCTGGACTCCGTGCTGTGCTATGACCGGCTATCGTTCAAATGGGGCGAGTCGGACCCACTGCCCTACCCTGTTTACGGCCACACGGTGCTGTCCCACCTGGACCTCGTCTA TGTCATTGGGGGCAAGGGCAGTGACAGGAAGTGCCTCAACAAGACCTGTGTCTATGACCCCAAGAAGTTTGAGTGGAAGGAGCTGGCGCCCATGCAGACGGCCCGCTCGCTCTTCGGGGCCACCGTGC ACGACGGCCGCATCGTCGTGGCCGCGGGGGTCACGGACACAGGGCTGACGAGCAGCGCTGAGGTGTACAGCATCGCAGATGACAAGTGGTCACCCTTTGAGGCCTTCCCGCAGGAGCGCAGCTCCCTC AGCCTGGTCAGCCTGGCGGGCACCCTCTATGCCATCGGTGGCTTCGCCACGCTGGAGACCGAGTCTGGAGAGCTGGTCCCCACAGAGCTCAACGACATCTGGAGGTACAACGAGGAGGAGAAGAAGTG GGAGGGTGTCCTGCGGGAGATCGCCTACGCAGCGGGCGCCACCTTCCTGCCCGTGCGGCTCAATGTGCTGCGCCTGACCAAGATGTGACCCCGTGCGCCCTGTGGGCTCGGGGAGGAGGCCGGGAGAG GCGGAGCTGCCGGGGCCCACGGTGGGGCCAGAGGGCTGCCACGGCCAGCCCGGCTCTCGAGGTGAGGACTTTGGCCCCTCCGGGGTCACCAGGCCTCCTCTGCCCCCCTGGGTGCCCAGAGCCAGAGC CACAGGGAGGAATCCGGGCAGCGCCCCAGCCTGTCGCTGTGTGCCGCTGGCGTCCCCGCCTGCCAGATGGGGCGTCCCCGACGCGCGCACCTGAAGCCCGTGGGTCCGCATTGTTGAGGAGATAAAGT GGCCCAGGCTCCGGAATCCACTGCCAGGGGACAGTCACCGGCAAGCAGT
hide sequence
RefSeq Acc Id:
XP_005383588 ⟸ XM_005383531
- UniProtKB:
A0A8C2W9Q3 (UniProtKB/TrEMBL), A0A8C2W3Y6 (UniProtKB/TrEMBL)
- Sequence:
MALGLEQAEEQRLYQQTLLQDGLKDMLDHGKFLDCVVRAGEREFPCHRLVLAACSPYFRARFLAEPESAGEVRLEEVSPDVVGQVLHYLYTSEIALDEASVQDLFAAAHRFQIPSIFTICVSFLQKRL CLANCLAVFRLGLLLDCARLAVAARDFICARFSLVARDADFLGLSADELIAIISSDGLNVEKEEAVFEAVMRWAESGDAEARAERQRALPTVFESVRFRLLPRAFLETRVARHPLVRAQPELLRKVQM VKDAHEGRVTTLRRKRRDQGQEKGAEQSAAPEEARARAPAAEEEDGEAAERVLPGVLNDTLRFGMFLQDLIFMISEEGAVAYDPVANECYCASLSAQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDP MSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNAIYVVGGRELKDGEHSLDSVLCYDRLSFKWGESDPLPYPVYGHTVLSHLDLVYVIGGKGSDRKCLNKTCVYDPKKFEWKELAPMQTARSLFGA TVHDGRIVVAAGVTDTGLTSSAEVYSIADDKWSPFEAFPQERSSLSLVSLAGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREIAYAAGATFLPVRLNVLRLTKM
hide sequence
Ensembl Acc Id:
ENSCLAP00000023903 ⟸ ENSCLAT00000024129
Ensembl Acc Id:
ENSCLAP00000023902 ⟸ ENSCLAT00000024128
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-08-16
Klhl40
kelch like family member 40
kelch-like family member 40
Symbol and/or name change
5135510
APPROVED