Symbol: |
Fdx1 |
Name: |
ferredoxin 1 |
RGD ID: |
8852822 |
Description: |
ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); cholesterol monooxygenase (side-chain-cleaving) activity (ortholog); electron transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to cAMP (ortholog); cellular response to epinephrine stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); chromosome 11 partial duplication syndrome (ortholog); intellectual disability (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
adrenodoxin, mitochondrial |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
|
More Info |
Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
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Orthologs 1 |
Homo sapiens (human): |
FDX1 (ferredoxin 1) |
NCBI |
Ortholog |
Mus musculus (house mouse): |
Fdx1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Rattus norvegicus (Norway rat): |
Fdx1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Pan paniscus (bonobo/pygmy chimpanzee): |
FDX1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Canis lupus familiaris (dog): |
FDX1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Fdx1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Sus scrofa (pig): |
FDX1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chlorocebus sabaeus (green monkey): |
FDX1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Heterocephalus glaber (naked mole-rat): |
Fdx1 (ferredoxin 1) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
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Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
NCBI Annotation Information: |
Annotation category: partial on reference assembly |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955412 | 12,286,408 - 12,316,707 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955412 | 12,280,900 - 12,312,930 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
|
Fdx1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955412 | 12,286,408 - 12,316,707 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955412 | 12,280,900 - 12,312,930 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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FDX1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 110,429,331 - 110,464,884 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 110,429,948 - 110,464,884 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 110,300,672 - 110,335,608 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 109,805,804 - 109,840,815 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 109,805,803 - 109,840,814 | NCBI | | | | | Celera | 11 | 107,454,082 - 107,489,091 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q22.3 | NCBI | | | | | HuRef | 11 | 106,225,358 - 106,260,247 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 110,183,752 - 110,218,730 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 110,439,522 - 110,475,104 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Fdx1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 51,854,323 - 51,874,902 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 51,854,606 - 51,874,856 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 51,943,023 - 51,963,602 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 51,943,306 - 51,963,556 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 51,751,412 - 51,771,638 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 51,695,672 - 51,715,898 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 49,216,519 - 49,236,839 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | A5.3 | NCBI | | | | | cM Map | 9 | 28.62 | NCBI | | | | |
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Fdx1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 61,164,839 - 61,183,645 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 52,268,536 - 52,287,344 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 52,268,536 - 52,287,414 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 57,817,827 - 57,836,608 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 56,096,794 - 56,115,575 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 53,961,051 - 53,979,836 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 56,373,729 - 56,393,199 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 56,373,723 - 56,393,233 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 54,958,315 - 54,977,222 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 55,291,396 - 55,310,507 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 55,323,249 - 55,329,561 (-) | NCBI | | | | | Celera | 8 | 51,793,129 - 51,811,786 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24 | NCBI | | | | |
|
FDX1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 111,170,868 - 111,207,767 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 112,262,007 - 112,298,701 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 105,311,613 - 105,345,414 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 109,158,419 - 109,190,869 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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FDX1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 22,452,011 - 22,485,581 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 22,451,209 - 22,485,395 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 22,371,400 - 22,404,749 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 22,477,844 - 22,511,361 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 22,479,333 - 22,511,216 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 22,536,376 - 22,569,968 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 22,436,016 - 22,540,532 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 22,485,417 - 22,518,946 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Fdx1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 92,799,925 - 92,827,430 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936612 | 3,874,748 - 3,905,825 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936612 | 3,878,179 - 3,905,678 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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FDX1 (Sus scrofa - pig) |
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FDX1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 101,777,499 - 101,813,753 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 101,777,678 - 101,816,379 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 24,135,097 - 24,172,218 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Fdx1 (Heterocephalus glaber - naked mole-rat) |
|
.
Ensembl Acc Id: |
ENSCLAT00000019736 ⟹ ENSCLAP00000019543 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
---|
ChiLan1.0 Ensembl | NW_004955412 | 12,286,408 - 12,316,707 (+) | Ensembl |
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RefSeq Acc Id: |
XM_013511103 ⟹ XP_013366557 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
---|
ChiLan1.0 | NW_004955412 | 12,280,900 - 12,312,930 (+) | NCBI |
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Sequence: |
GGCGTGGCAGCCGCGGGCCTTGGAGCGGGCAGCGGGGGCATTTATAGGTCACGCGGGGCGGTGTCGCCCGGACTCGCAGCTGGAAGCCGGATTCGTGGAGAGCCCGCCGGCCCGGGCCCGCGTCCCTC GCTACCGTTCGCCCTCGCAGAGCCCGCGTGGCCGCTGCGGGGCGGCCTGTGTCGCACGCGCAGCTCCCGACCTGGGCCATGGCCGCCGCGGGCGCCCGGCTCCTGCGCGCCGCCTCCGCGGCCGTCCG CGGCCCGGCCCGCCGCTGGCTGCTCCTGGCCGGACCCCGCGCGGGAGCGGGCGGGCATGCGGGGAGCCGGCCGCTGAGCACGTCGGCCCGGAGCAGCTCAGAAGATAAGATAACAGTCCACTTTATAA ACCGAGATGGTGAAAAATTAACAGCCAAAGGAAAAATTGGCGACTCTCTTCTAGATGTTGTGGTTGAAAATAATCTAGATATTGATGGTTTTGGTGCCTGTGAGGGAACCTTGGCTTGCTCTACCTGC CACCTCATCTTCGAAGATCACGTGTATGAGAAGTTAGATGTGATCACCGATGAGGAGAACGACATGCTTGATCTGGCTTATGGACTGACAGACAGGTCCCGGTTGGGCTGCCAAATCTGTTTGAGCAA GTGGATGGACAACATGACTGTGCGAGTACCTGAGGCGGTGGCTGATGCCAGGCAGTCTGTTGACGTGGGCAAGAATTCCTAAGTTGCAATAAAAGAGATATTTTCACAAAATTTTACCTATTTTTATA ATTATTTTTAATGTAATTAAATGAGCACATGGGTGACTGGATTTATTATTATGACTAGCTTTACTTATTTTAATTCACCTTGTATAACTGAATTTTGTAGTATGAGTGTGTGTGATCTTCTTTTGGTT AAATTGTATAAATGTATGTTAAATATTAGAAAGTAGCTGATATGATAATAAATCCTTATGTATTTTACCTTATGTGTTCTTAGCAGCTTTATAAAAATATGACCACTTAATTTTATGTCTGCCTATTT AGAAAGTAGGTTAAAAAAGGTAATATTCCCCCCGTTTAAAATGAGTGAAGGCAGAGATCTAAAGTGACTTGCCTGGGGCTATATAACCGGAAAATCTATACTAGAACTTCTATCTTGTTACTATAAAT TTTCTTTTTAGACTGAATCCAGAAAAATTTTGAGTCTCTTAATTTATAGCACTAAATAAATGTAAATTATATTGAAAAACAA
hide sequence
|
RefSeq Acc Id: |
XP_013366557 ⟸ XM_013511103 |
- Sequence: |
MAAAGARLLRAASAAVRGPARRWLLLAGPRAGAGGHAGSRPLSTSARSSSEDKITVHFINRDGEKLTAKGKIGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHVYEKLDVITDEENDMLDLA YGLTDRSRLGCQICLSKWMDNMTVRVPEAVADARQSVDVGKNS
hide sequence
|
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Ensembl Acc Id: |
ENSCLAP00000019543 ⟸ ENSCLAT00000019736 |
|
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2015-08-25 |
Fdx1 |
ferredoxin 1 |
LOC102014654 |
uncharacterized LOC102014654 |
Symbol and/or name change |
5135510 |
APPROVED |
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