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Gene: Uspl1 (ubiquitin specific peptidase like 1) Chinchilla lanigera

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Symbol:

Uspl1

Name:

ubiquitin specific peptidase like 1

RGD ID:

8826804

Description:

ENCODES a protein that exhibits deSUMOylase activity (ortholog); SUMO binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); Cajal body organization (ortholog); cell population proliferation (ortholog); FOUND IN Cajal body (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

SUMO-specific isopeptidase USPL1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	15,173,625 - 15,209,473 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	15,173,448 - 15,212,443 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Uspl1	Chinchilla	blastocyst formation	acts_upstream_of_or_within	ISO	RGD:1321965	9068941	PMID:27869233	MGI	PMID:27869233
Uspl1	Chinchilla	Cajal body organization	involved_in	ISO	RGD:1321964	9068941	PMID:22878415	UniProt	PMID:22878415
Uspl1	Chinchilla	cell population proliferation	involved_in	ISO	RGD:1321964	9068941	PMID:22878415	UniProt	PMID:22878415
Uspl1	Chinchilla	protein desumoylation	involved_in	ISO	RGD:1321964	9068941	PMID:22878415	UniProt	PMID:22878415
Uspl1	Chinchilla	snRNA transcription	involved_in	ISO	RGD:1321964	9068941	PMID:24413172	UniProt	PMID:24413172

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Uspl1	Chinchilla	Cajal body	located_in	ISO	RGD:1321964	9068941	PMID:22878415, PMID:24413172	UniProt	PMID:22878415\|PMID:24413172

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Uspl1	Chinchilla	deSUMOylase activity	enables	ISO	RGD:1321964	9068941	PMID:22878415	UniProt	PMID:22878415
Uspl1	Chinchilla	protein binding	enables	ISO	UniProtKB:P55199	9068941	PMID:24413172	UniProt	PMID:24413172
Uspl1	Chinchilla	protein binding	enables	ISO	UniProtKB:P55854	9068941	PMID:25416956, PMID:35914814	IntAct	PMID:25416956\|PMID:35914814
Uspl1	Chinchilla	protein binding	enables	ISO	UniProtKB:P55854\|UniProtKB:P61956\|UniProtKB:P63165	9068941	PMID:22878415	IntAct	PMID:22878415
Uspl1	Chinchilla	protein binding	enables	ISO	UniProtKB:P61956	9068941	PMID:21988832	IntAct	PMID:21988832
Uspl1	Chinchilla	SUMO binding	enables	ISO	RGD:1321964	9068941	PMID:22878415	UniProt	PMID:22878415
Uspl1	Chinchilla	ubiquitin binding	NOT\|enables	ISO	RGD:1321964	9068941	PMID:22878415	UniProt	PMID:22878415

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

PMID:22301074	PMID:30032202

Uspl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	15,173,625 - 15,209,473 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	15,173,448 - 15,212,443 (-)	NCBI	ChiLan1.0	ChiLan1.0

USPL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	30,617,920 - 30,660,766 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	30,617,693 - 30,660,770 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	31,192,057 - 31,234,903 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	30,089,920 - 30,131,686 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	30,089,919 - 30,131,686	NCBI
Celera	13	12,260,821 - 12,302,674 (+)	NCBI		Celera
Cytogenetic Map	13	q12.3	NCBI
HuRef	13	12,009,328 - 12,051,666 (+)	NCBI		HuRef
CHM1_1	13	31,159,523 - 31,201,291 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	13	29,839,977 - 29,882,805 (+)	NCBI		T2T-CHM13v2.0

Uspl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	149,121,338 - 149,152,246 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	149,121,160 - 149,152,244 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	149,184,560 - 149,215,434 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	149,184,350 - 149,215,434 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	149,996,136 - 150,027,010 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	149,495,067 - 149,525,783 (+)	NCBI		MGSCv36	mm8
Celera	5	147,199,738 - 147,230,612 (+)	NCBI		Celera
Cytogenetic Map	5	G3	NCBI
cM Map	5	89.18	NCBI

Uspl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	10,859,764 - 10,886,761 (-)	NCBI		GRCr8
mRatBN7.2	12	5,823,460 - 5,850,470 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	5,823,359 - 5,850,366 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	6,495,299 - 6,521,899 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	7,118,425 - 7,145,025 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	6,146,430 - 6,173,029 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	6,930,018 - 6,957,027 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	6,929,978 - 6,956,984 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	9,026,185 - 9,053,011 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	6,318,581 - 6,345,858 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	6,337,758 - 6,345,845 (-)	NCBI
Celera	12	7,581,451 - 7,608,343 (-)	NCBI		Celera
Cytogenetic Map	12	p11	NCBI

USPL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	30,201,627 - 30,243,495 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	21,308,339 - 21,350,331 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	11,895,108 - 11,937,000 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	30,329,995 - 30,371,870 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	30,329,995 - 30,371,870 (+)	Ensembl	panpan1.1		panPan2

USPL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	9,397,575 - 9,430,058 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	9,397,763 - 9,427,431 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	9,442,413 - 9,475,896 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	9,509,054 - 9,542,555 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	9,509,061 - 9,542,397 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	9,403,303 - 9,436,787 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	9,411,676 - 9,444,966 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	9,453,709 - 9,487,196 (-)	NCBI		UU_Cfam_GSD_1.0

Uspl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	170,542,355 - 170,581,864 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	25,374,332 - 25,410,343 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	25,370,381 - 25,409,800 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USPL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	7,321,202 - 7,361,571 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	7,321,187 - 7,361,280 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	6,990,288 - 7,005,953 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

USPL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	9,502,322 - 9,546,633 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	9,504,682 - 9,546,319 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666057	34,818,942 - 34,863,740 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Uspl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624776	7,658,267 - 7,696,393 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624776	7,662,591 - 7,698,811 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005387742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01030347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01030348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01036768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000004489 ⟹ ENSCLAP00000004406

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955431	15,173,625 - 15,209,473 (-)	Ensembl

RefSeq Acc Id:

XM_005387742 ⟹ XP_005387799

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	15,173,448 - 15,212,443 (-)	NCBI

Sequence:

show sequence

CAACCGGAAGTTGCTTTCCTGGCCGAGCGGCGGTGAGGGAGGAGTAGTGCGCGCGGAACGTGGGTTGAACGTTGCGATTTGGTGTGGCGCGCAAGCTGGAACAGGAGTTCGGACCGGCCCGGTACGAA
GAAGGGGAGTGCTCGGGGCAGGGTTCATTGAAAAATCCTTAGTGATATTGACATGTTTCAAGTGACATAAATTAGCCAAAGACTCGGAATGATGGATTCTTCGAAGATTGGAAATGGTTTGCCAGTGA
TTGGACAAGGGCCTGATATAGGGATATCTTCACTCCCCATGGTGGGGTATTTGGGAAAAAATTATGATTCAGCTAAAGTTACATCAGATGGATATTGTCCTGCTTGTAGAGAGAAGGGAAAGTTAAAA
GCATTAAAGACTTACCGAATTAGTTTTCAAGAATCTATCTTTTTGTGTGAGGATCTGCAGTGCATCTATCCTTTGGGCTCTAAGTCACTTAATAATTTAATTTCCCCTGATTCCGAAGACTGTCACAC
TCCAGATAAGCCTCAAAAAAGAAAGATCTTGGAAACTAGCTGTAAAGATTTATCTGTTTTATCAAATTCTAAAAAGACTAGAACTCATATTTTTACTGGTGATAAACAAATTTTAAATAGAGAGCATA
ATGGAGAAGTATGTACTGAACTCTCATCAGATTCATTGCCTGGTAGCCTTCAACGCGATTCAGTTGGGACAGCTGATGCCTTGGGACAGAATGAGACTTCGGCAACTGATAATGTTGATATGGCTACT
GAAGAGCCCGCCACAGTTGATGTTTCTGGAACTGGGGAAATTTCTTCTCGAAGTGAAGGATGTTCATCTGAATGTGAAACGCCACTGGAGAGAACATACTCACTGTGCCAGACTTCATGTGTCCAGTG
GAGAAATGCTAATGCGCTGTGCTGGTTAGATTCTATCCTGTCAGTTTTGGTGCACTTGGAAGCCTTGAAGAACATTGTGACTGAATTGTGTTCTAAGGACTCTGTATTTTGGCGGTTGTTTGAGAAAT
ATAATCAAGCAAATAAGCTCCTGTACACCAGTCAGTTGGATGAAGTTAAAGATGGAGATTGTAAAAAACTTACTTCAGAAATTTTTGCAGAGATAGAGACCTGTCTGAATGAAGTCAGAGATGAAATT
TTTACTAAACTTCAGCCCCAGCTTAGATGCACATTAGGTGAGAGAGAAAGCCCTGTGTTTGCATTTCCTCTGCTCTTAAGAATAGAAGACCCCATTGGAAAGCTCTTCACGTATTCTTTTTCCTGGAA
CTTTGAATGTTCACAGTGTGGGCACCGATACCAAAACAGATGTGTGAAGAATCTCGTCACCTTTACAAATGTCATCCCCGGGTGGCACCCGCTTAATGCTGCCCATTTCGGCCCGTGCAACAGTTGCA
ACAGTAGATCACAAATAAGAAAGATGGTGTTGGAAAAAGTGTCTCCCATATTCATGCTGCACTTCGTAGAAGGGTTACCGCGGAATGACTTGCAGCACTACTCGTTTCATTTTGGAGGCTGTCTTTAT
CAAGTAACAGCCATAATTCAGTACCAAGCCAATGACCATTTCATAACGTGGATTTTACATGCAGATGGTAGTTGGCTGGAATGTGACGACCTAAAGGGTTTGTGTGCGCAAAGGCATGAGAAATTTGC
AGTTCCCGCTTCAGAGATACATATTGTTATTTGGGAAAGAAAAACATCCCAAGCAACAGATGAAGAAGCTGCCTGCCCTCCACTTAAGAAGACTAATGATCAGCATGCTTCCGGGGAAGAGAGACCAG
CAACTCCAGCATCGCGTCCTCCGGCCCGGGCTGCCTCAGCAGAGACGTCTTCACTCACTCTCCCCACGTCTGCGGCCCCTGCTCCTCATAGCCTCCCACAGGACAGAGCTGTGGCTCAGGAAGATCAC
AGACATTCAGATCCAAGAGTTTTGGCTGACAGTAATGTTTTACCTCTGACACTTGAAGGCTCTGTCTGGAAGACTGCCTCAGTTTTTCAGGTTACCACTGAAGCATTCCTACCCCAAAACACACCTGT
GGCAGAAAATACAGGGCTTATCAAAACAAACACTTTGCAATTGCAGGAATCACCAGTGGGTTCTTCAGTGTCAGCTCCATGTAAAGAAAAACTTACCCAAGCCCAGCTTGTGGGCTTAAGTTTCCCAT
TGCAAGTTGTAAACACAAACACACAGTTGGAACTGCTGAATACAGAACATGCTGCAATTACTCAGCCTGTGAATAACGCGCAGGCTGCTGGTCTTGTCCAGGGAGTAAAGTCAGGAGAAGTTGCAAAG
GACCCTGAGTTAAAACAGACCCTTTCATGGAAAACTGAGAAATTAAAACCAGAAACACCTTCTGTATCTCAGGTATCGAATTTGAAGAAAAAAGCCACAGCAGATCCACAGTCTGTGACCGCCACATC
ATCACAGAATCAGCCCCCAAAAGAAAATCAGAAGAAACCATTTGTGGGCAGTTGGGTTAAAGGCCTGCTAAGCAGGGGTGCTTCTTTTATGCCCTCCTGTGTTTCGGCTAATAATAGAAACACTATAA
CTGATTTGCAGCCTTCAGTTAAAGGGGCGCGTAATTTTGGTGGCTTTAAAACTAAAGGTACAAAGCAAAAGGCCAGCCACATATCAAAGAAAGCCCGCAGATGTGCAGATCAGCTTCCTGCAGTCCGC
AACCCCCAACCAGATCTTCCACCTTCAGGGAATACAGCTGCTTCTCCACGCACAAGTGAGAATACCGCTTCAGAACCTCCGCTGGAGCTGGACAGGGCCTCACGTGGAGCTCACCTCAGTCACCCTTC
TCCCGGAAGGGAAAATGGGGTTTCTTCAGCAAACCATGGGGACTTGGCTGAAGGTCAGATTCATAAGCTTCGTCTGAAACTTCTTAGAAAACTAAAGGCAAAAAAGAAGAAGTTAGCTGCCCTCATGG
CTGCCTCTCAATGTGGAGGAATTCCTAGTGAAAATTTAGAAAATGGGCCCCAGTGTGAGTCTCCAAATGATTGTGAATCAATAGAAGACTTGTTAAGTGAACTGCAGTATCATATTGATGTTGCAGAC
AGTAAATCTGGAGGTACCAGTGTTTCCTCATGCAATCAAATGCATGAAGAAATTTTAGCAGAATTATTGTCTCCAGGTATTTCAACGGAGCTCTCAGAAACTGGGGAGGCCGATGTGAAGTATTTGGA
AATGGGAGACAACCATGATCCAGCCCCAGAACCCACTGAATTAACTAATGATCCCCAGAACATACATCTGAAACAGGAGCACAATTATTGCAGCCCGACCAAGAGGAGCCAGTGTGACGCTCAGGCAG
TCCTACAGATAAACAATGCCTGCATCAGGACATTAAACTTGGAGAGCCCCGTGAAGACTGATATGTTTGATGAGTTTTTTCCTACTGCGTTAACTTTGGCAAATGACACCTTCGACTTAACTCATTTT
GATGAGTATCTGTTTGAGAATTATTGAATATTTGTAAACTCTTTAATATTTATTATTGCTGTTAGAAAAACTTAACTGCGTTTTCAGGTATACACTGTCCTTGTAATAATCATGAATGAAATTTAAGC
TGCTGAAAGTTTTACCTTTGGTCCTGCCCCTGAAGCATGTAACCTGTTATACAAATTAAAATCATTAGGAATTGTT

hide sequence

RefSeq Acc Id:

XM_013515876 ⟹ XP_013371330

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	15,173,448 - 15,212,440 (-)	NCBI

Sequence:

show sequence

CCGGAAGTTGCTTTCCTGGCCGAGCGGCGGTGAGGGAGGAGTAGTGCGCGCGGAACGTGGGTTGAACGTTGCGATTTGGTGTGGCGCGCAAGCTGGAACAGGAGTTCGGACCGGCCCGGTACGAAGAA
GGGGAGTGCTCGGGGCAGAATTATGATTCAGCTAAAGTTACATCAGATGGATATTGTCCTGCTTGTAGAGAGAAGGGAAAGTTAAAAGCATTAAAGACTTACCGAATTAGTTTTCAAGAATCTATCTT
TTTGTGTGAGGATCTGCAGGAATAGTGTTCTTAATGAAATAGATGGGTTTACAGCAGGGATCAGCAAACTTTGTATGATGCAAAGCCTTCAACGCGATTCAGTTGGGACAGCTGATGCCTTGGGACAG
AATGAGACTTCGGCAACTGATAATGTTGATATGGCTACTGAAGAGCCCGCCACAGTTGATGTTTCTGGAACTGGGGAAATTTCTTCTCGAAGTGAAGGATGTTCATCTGAATGTGAAACGCCACTGGA
GAGAACATACTCACTGTGCCAGACTTCATGTGTCCAGTGGAGAAATGCTAATGCGCTGTGCTGGTTAGATTCTATCCTGTCAGTTTTGGTGCACTTGGAAGCCTTGAAGAACATTGTGACTGAATTGT
GTTCTAAGGACTCTGTATTTTGGCGGTTGTTTGAGAAATATAATCAAGCAAATAAGCTCCTGTACACCAGTCAGTTGGATGAAGTTAAAGATGGAGATTGTAAAAAACTTACTTCAGAAATTTTTGCA
GAGATAGAGACCTGTCTGAATGAAGTCAGAGATGAAATTTTTACTAAACTTCAGCCCCAGCTTAGATGCACATTAGGTGAGAGAGAAAGCCCTGTGTTTGCATTTCCTCTGCTCTTAAGAATAGAAGA
CCCCATTGGAAAGCTCTTCACGTATTCTTTTTCCTGGAACTTTGAATGTTCACAGTGTGGGCACCGATACCAAAACAGATGTGTGAAGAATCTCGTCACCTTTACAAATGTCATCCCCGGGTGGCACC
CGCTTAATGCTGCCCATTTCGGCCCGTGCAACAGTTGCAACAGTAGATCACAAATAAGAAAGATGGTGTTGGAAAAAGTGTCTCCCATATTCATGCTGCACTTCGTAGAAGGGTTACCGCGGAATGAC
TTGCAGCACTACTCGTTTCATTTTGGAGGCTGTCTTTATCAAGTAACAGCCATAATTCAGTACCAAGCCAATGACCATTTCATAACGTGGATTTTACATGCAGATGGTAGTTGGCTGGAATGTGACGA
CCTAAAGGGTTTGTGTGCGCAAAGGCATGAGAAATTTGCAGTTCCCGCTTCAGAGATACATATTGTTATTTGGGAAAGAAAAACATCCCAAGCAACAGATGAAGAAGCTGCCTGCCCTCCACTTAAGA
AGACTAATGATCAGCATGCTTCCGGGGAAGAGAGACCAGCAACTCCAGCATCGCGTCCTCCGGCCCGGGCTGCCTCAGCAGAGACGTCTTCACTCACTCTCCCCACGTCTGCGGCCCCTGCTCCTCAT
AGCCTCCCACAGGACAGAGCTGTGGCTCAGGAAGATCACAGACATTCAGATCCAAGAGTTTTGGCTGACAGTAATGTTTTACCTCTGACACTTGAAGGCTCTGTCTGGAAGACTGCCTCAGTTTTTCA
GGTTACCACTGAAGCATTCCTACCCCAAAACACACCTGTGGCAGAAAATACAGGGCTTATCAAAACAAACACTTTGCAATTGCAGGAATCACCAGTGGGTTCTTCAGTGTCAGCTCCATGTAAAGAAA
AACTTACCCAAGCCCAGCTTGTGGGCTTAAGTTTCCCATTGCAAGTTGTAAACACAAACACACAGTTGGAACTGCTGAATACAGAACATGCTGCAATTACTCAGCCTGTGAATAACGCGCAGGCTGCT
GGTCTTGTCCAGGGAGTAAAGTCAGGAGAAGTTGCAAAGGACCCTGAGTTAAAACAGACCCTTTCATGGAAAACTGAGAAATTAAAACCAGAAACACCTTCTGTATCTCAGGTATCGAATTTGAAGAA
AAAAGCCACAGCAGATCCACAGTCTGTGACCGCCACATCATCACAGAATCAGCCCCCAAAAGAAAATCAGAAGAAACCATTTGTGGGCAGTTGGGTTAAAGGCCTGCTAAGCAGGGGTGCTTCTTTTA
TGCCCTCCTGTGTTTCGGCTAATAATAGAAACACTATAACTGATTTGCAGCCTTCAGTTAAAGGGGCGCGTAATTTTGGTGGCTTTAAAACTAAAGGTACAAAGCAAAAGGCCAGCCACATATCAAAG
AAAGCCCGCAGATGTGCAGATCAGCTTCCTGCAGTCCGCAACCCCCAACCAGATCTTCCACCTTCAGGGAATACAGCTGCTTCTCCACGCACAAGTGAGAATACCGCTTCAGAACCTCCGCTGGAGCT
GGACAGGGCCTCACGTGGAGCTCACCTCAGTCACCCTTCTCCCGGAAGGGAAAATGGGGTTTCTTCAGCAAACCATGGGGACTTGGCTGAAGGTCAGATTCATAAGCTTCGTCTGAAACTTCTTAGAA
AACTAAAGGCAAAAAAGAAGAAGTTAGCTGCCCTCATGGCTGCCTCTCAATGTGGAGGAATTCCTAGTGAAAATTTAGAAAATGGGCCCCAGTGTGAGTCTCCAAATGATTGTGAATCAATAGAAGAC
TTGTTAAGTGAACTGCAGTATCATATTGATGTTGCAGACAGTAAATCTGGAGGTACCAGTGTTTCCTCATGCAATCAAATGCATGAAGAAATTTTAGCAGAATTATTGTCTCCAGGTATTTCAACGGA
GCTCTCAGAAACTGGGGAGGCCGATGTGAAGTATTTGGAAATGGGAGACAACCATGATCCAGCCCCAGAACCCACTGAATTAACTAATGATCCCCAGAACATACATCTGAAACAGGAGCACAATTATT
GCAGCCCGACCAAGAGGAGCCAGTGTGACGCTCAGGCAGTCCTACAGATAAACAATGCCTGCATCAGGACATTAAACTTGGAGAGCCCCGTGAAGACTGATATGTTTGATGAGTTTTTTCCTACTGCG
TTAACTTTGGCAAATGACACCTTCGACTTAACTCATTTTGATGAGTATCTGTTTGAGAATTATTGAATATTTGTAAACTCTTTAATATTTATTATTGCTGTTAGAAAAACTTAACTGCGTTTTCAGGT
ATACACTGTCCTTGTAATAATCATGAATGAAATTTAAGCTGCTGAAAGTTTTACCTTTGGTCCTGCCCCTGAAGCATGTAACCTGTTATACAAATTAAAATCATTAGGAATTGTT

hide sequence

RefSeq Acc Id:

XM_013515877 ⟹ XP_013371331

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	15,173,448 - 15,212,440 (-)	NCBI

Sequence:

show sequence

CCGGAAGTTGCTTTCCTGGCCGAGCGGCGGTGAGGGAGGAGTAGTGCGCGCGGAACGTGGGTTGAACGTTGCGATTTGGTGTGGCGCGCAAGCTGGAACAGGAGTTCGGACCGGCCCGGTACGAAGAA
GGGGAGTGCTCGGGGCAGAATTATGATTCAGCTAAAGTTACATCAGATGGATATTGTCCTGCTTGTAGAGAGAAGGGAAAGTTAAAAGCATTAAAGACTTACCGAATTAGTTTTCAAGAATCTATCTT
TTTGTGTGAGGATCTGCAGCCTTCAACGCGATTCAGTTGGGACAGCTGATGCCTTGGGACAGAATGAGACTTCGGCAACTGATAATGTTGATATGGCTACTGAAGAGCCCGCCACAGTTGATGTTTCT
GGAACTGGGGAAATTTCTTCTCGAAGTGAAGGATGTTCATCTGAATGTGAAACGCCACTGGAGAGAACATACTCACTGTGCCAGACTTCATGTGTCCAGTGGAGAAATGCTAATGCGCTGTGCTGGTT
AGATTCTATCCTGTCAGTTTTGGTGCACTTGGAAGCCTTGAAGAACATTGTGACTGAATTGTGTTCTAAGGACTCTGTATTTTGGCGGTTGTTTGAGAAATATAATCAAGCAAATAAGCTCCTGTACA
CCAGTCAGTTGGATGAAGTTAAAGATGGAGATTGTAAAAAACTTACTTCAGAAATTTTTGCAGAGATAGAGACCTGTCTGAATGAAGTCAGAGATGAAATTTTTACTAAACTTCAGCCCCAGCTTAGA
TGCACATTAGGTGAGAGAGAAAGCCCTGTGTTTGCATTTCCTCTGCTCTTAAGAATAGAAGACCCCATTGGAAAGCTCTTCACGTATTCTTTTTCCTGGAACTTTGAATGTTCACAGTGTGGGCACCG
ATACCAAAACAGATGTGTGAAGAATCTCGTCACCTTTACAAATGTCATCCCCGGGTGGCACCCGCTTAATGCTGCCCATTTCGGCCCGTGCAACAGTTGCAACAGTAGATCACAAATAAGAAAGATGG
TGTTGGAAAAAGTGTCTCCCATATTCATGCTGCACTTCGTAGAAGGGTTACCGCGGAATGACTTGCAGCACTACTCGTTTCATTTTGGAGGCTGTCTTTATCAAGTAACAGCCATAATTCAGTACCAA
GCCAATGACCATTTCATAACGTGGATTTTACATGCAGATGGTAGTTGGCTGGAATGTGACGACCTAAAGGGTTTGTGTGCGCAAAGGCATGAGAAATTTGCAGTTCCCGCTTCAGAGATACATATTGT
TATTTGGGAAAGAAAAACATCCCAAGCAACAGATGAAGAAGCTGCCTGCCCTCCACTTAAGAAGACTAATGATCAGCATGCTTCCGGGGAAGAGAGACCAGCAACTCCAGCATCGCGTCCTCCGGCCC
GGGCTGCCTCAGCAGAGACGTCTTCACTCACTCTCCCCACGTCTGCGGCCCCTGCTCCTCATAGCCTCCCACAGGACAGAGCTGTGGCTCAGGAAGATCACAGACATTCAGATCCAAGAGTTTTGGCT
GACAGTAATGTTTTACCTCTGACACTTGAAGGCTCTGTCTGGAAGACTGCCTCAGTTTTTCAGGTTACCACTGAAGCATTCCTACCCCAAAACACACCTGTGGCAGAAAATACAGGGCTTATCAAAAC
AAACACTTTGCAATTGCAGGAATCACCAGTGGGTTCTTCAGTGTCAGCTCCATGTAAAGAAAAACTTACCCAAGCCCAGCTTGTGGGCTTAAGTTTCCCATTGCAAGTTGTAAACACAAACACACAGT
TGGAACTGCTGAATACAGAACATGCTGCAATTACTCAGCCTGTGAATAACGCGCAGGCTGCTGGTCTTGTCCAGGGAGTAAAGTCAGGAGAAGTTGCAAAGGACCCTGAGTTAAAACAGACCCTTTCA
TGGAAAACTGAGAAATTAAAACCAGAAACACCTTCTGTATCTCAGGTATCGAATTTGAAGAAAAAAGCCACAGCAGATCCACAGTCTGTGACCGCCACATCATCACAGAATCAGCCCCCAAAAGAAAA
TCAGAAGAAACCATTTGTGGGCAGTTGGGTTAAAGGCCTGCTAAGCAGGGGTGCTTCTTTTATGCCCTCCTGTGTTTCGGCTAATAATAGAAACACTATAACTGATTTGCAGCCTTCAGTTAAAGGGG
CGCGTAATTTTGGTGGCTTTAAAACTAAAGGTACAAAGCAAAAGGCCAGCCACATATCAAAGAAAGCCCGCAGATGTGCAGATCAGCTTCCTGCAGTCCGCAACCCCCAACCAGATCTTCCACCTTCA
GGGAATACAGCTGCTTCTCCACGCACAAGTGAGAATACCGCTTCAGAACCTCCGCTGGAGCTGGACAGGGCCTCACGTGGAGCTCACCTCAGTCACCCTTCTCCCGGAAGGGAAAATGGGGTTTCTTC
AGCAAACCATGGGGACTTGGCTGAAGGTCAGATTCATAAGCTTCGTCTGAAACTTCTTAGAAAACTAAAGGCAAAAAAGAAGAAGTTAGCTGCCCTCATGGCTGCCTCTCAATGTGGAGGAATTCCTA
GTGAAAATTTAGAAAATGGGCCCCAGTGTGAGTCTCCAAATGATTGTGAATCAATAGAAGACTTGTTAAGTGAACTGCAGTATCATATTGATGTTGCAGACAGTAAATCTGGAGGTACCAGTGTTTCC
TCATGCAATCAAATGCATGAAGAAATTTTAGCAGAATTATTGTCTCCAGGTATTTCAACGGAGCTCTCAGAAACTGGGGAGGCCGATGTGAAGTATTTGGAAATGGGAGACAACCATGATCCAGCCCC
AGAACCCACTGAATTAACTAATGATCCCCAGAACATACATCTGAAACAGGAGCACAATTATTGCAGCCCGACCAAGAGGAGCCAGTGTGACGCTCAGGCAGTCCTACAGATAAACAATGCCTGCATCA
GGACATTAAACTTGGAGAGCCCCGTGAAGACTGATATGTTTGATGAGTTTTTTCCTACTGCGTTAACTTTGGCAAATGACACCTTCGACTTAACTCATTTTGATGAGTATCTGTTTGAGAATTATTGA
ATATTTGTAAACTCTTTAATATTTATTATTGCTGTTAGAAAAACTTAACTGCGTTTTCAGGTATACACTGTCCTTGTAATAATCATGAATGAAATTTAAGCTGCTGAAAGTTTTACCTTTGGTCCTGC
CCCTGAAGCATGTAACCTGTTATACAAATTAAAATCATTAGGAATTGTT

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Protein RefSeqs	XP_005387799	(Get FASTA)	NCBI Sequence Viewer
	XP_013371330	(Get FASTA)	NCBI Sequence Viewer
	XP_013371331	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004406
	ENSCLAP00000004406.1

RefSeq Acc Id:	XP_005387799 ⟸ XM_005387742
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2URE0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMDSSKIGNGLPVIGQGPDIGISSLPMVGYLGKNYDSAKVTSDGYCPACREKGKLKALKTYRISFQESIFLCEDLQCIYPLGSKSLNNLISPDSEDCHTPDKPQKRKILETSCKDLSVLSNSKKTRTH IFTGDKQILNREHNGEVCTELSSDSLPGSLQRDSVGTADALGQNETSATDNVDMATEEPATVDVSGTGEISSRSEGCSSECETPLERTYSLCQTSCVQWRNANALCWLDSILSVLVHLEALKNIVTEL CSKDSVFWRLFEKYNQANKLLYTSQLDEVKDGDCKKLTSEIFAEIETCLNEVRDEIFTKLQPQLRCTLGERESPVFAFPLLLRIEDPIGKLFTYSFSWNFECSQCGHRYQNRCVKNLVTFTNVIPGWH PLNAAHFGPCNSCNSRSQIRKMVLEKVSPIFMLHFVEGLPRNDLQHYSFHFGGCLYQVTAIIQYQANDHFITWILHADGSWLECDDLKGLCAQRHEKFAVPASEIHIVIWERKTSQATDEEAACPPLK KTNDQHASGEERPATPASRPPARAASAETSSLTLPTSAAPAPHSLPQDRAVAQEDHRHSDPRVLADSNVLPLTLEGSVWKTASVFQVTTEAFLPQNTPVAENTGLIKTNTLQLQESPVGSSVSAPCKE KLTQAQLVGLSFPLQVVNTNTQLELLNTEHAAITQPVNNAQAAGLVQGVKSGEVAKDPELKQTLSWKTEKLKPETPSVSQVSNLKKKATADPQSVTATSSQNQPPKENQKKPFVGSWVKGLLSRGASF MPSCVSANNRNTITDLQPSVKGARNFGGFKTKGTKQKASHISKKARRCADQLPAVRNPQPDLPPSGNTAASPRTSENTASEPPLELDRASRGAHLSHPSPGRENGVSSANHGDLAEGQIHKLRLKLLR KLKAKKKKLAALMAASQCGGIPSENLENGPQCESPNDCESIEDLLSELQYHIDVADSKSGGTSVSSCNQMHEEILAELLSPGISTELSETGEADVKYLEMGDNHDPAPEPTELTNDPQNIHLKQEHNY CSPTKRSQCDAQAVLQINNACIRTLNLESPVKTDMFDEFFPTALTLANDTFDLTHFDEYLFENY hide sequence

RefSeq Acc Id:

XP_013371331 ⟸ XM_013515877

- Peptide Label:

isoform X3

- Sequence:

show sequence

MATEEPATVDVSGTGEISSRSEGCSSECETPLERTYSLCQTSCVQWRNANALCWLDSILSVLVH
LEALKNIVTELCSKDSVFWRLFEKYNQANKLLYTSQLDEVKDGDCKKLTSEIFAEIETCLNEVRDEIFTKLQPQLRCTLGERESPVFAFPLLLRIEDPIGKLFTYSFSWNFECSQCGHRYQNRCVKNL
VTFTNVIPGWHPLNAAHFGPCNSCNSRSQIRKMVLEKVSPIFMLHFVEGLPRNDLQHYSFHFGGCLYQVTAIIQYQANDHFITWILHADGSWLECDDLKGLCAQRHEKFAVPASEIHIVIWERKTSQA
TDEEAACPPLKKTNDQHASGEERPATPASRPPARAASAETSSLTLPTSAAPAPHSLPQDRAVAQEDHRHSDPRVLADSNVLPLTLEGSVWKTASVFQVTTEAFLPQNTPVAENTGLIKTNTLQLQESP
VGSSVSAPCKEKLTQAQLVGLSFPLQVVNTNTQLELLNTEHAAITQPVNNAQAAGLVQGVKSGEVAKDPELKQTLSWKTEKLKPETPSVSQVSNLKKKATADPQSVTATSSQNQPPKENQKKPFVGSW
VKGLLSRGASFMPSCVSANNRNTITDLQPSVKGARNFGGFKTKGTKQKASHISKKARRCADQLPAVRNPQPDLPPSGNTAASPRTSENTASEPPLELDRASRGAHLSHPSPGRENGVSSANHGDLAEG
QIHKLRLKLLRKLKAKKKKLAALMAASQCGGIPSENLENGPQCESPNDCESIEDLLSELQYHIDVADSKSGGTSVSSCNQMHEEILAELLSPGISTELSETGEADVKYLEMGDNHDPAPEPTELTNDP
QNIHLKQEHNYCSPTKRSQCDAQAVLQINNACIRTLNLESPVKTDMFDEFFPTALTLANDTFDLTHFDEYLFENY

hide sequence

RefSeq Acc Id:

XP_013371330 ⟸ XM_013515876

- Peptide Label:

isoform X2

- Sequence:

show sequence

MMQSLQRDSVGTADALGQNETSATDNVDMATEEPATVDVSGTGEISSRSEGCSSECETPLERTYSLCQTSCVQWRNANALCWLDSILSVLVHLEALKNIVTELCSKDSVFWRLFEKYNQANKLLYTSQ
LDEVKDGDCKKLTSEIFAEIETCLNEVRDEIFTKLQPQLRCTLGERESPVFAFPLLLRIEDPIGKLFTYSFSWNFECSQCGHRYQNRCVKNLVTFTNVIPGWHPLNAAHFGPCNSCNSRSQIRKMVLE
KVSPIFMLHFVEGLPRNDLQHYSFHFGGCLYQVTAIIQYQANDHFITWILHADGSWLECDDLKGLCAQRHEKFAVPASEIHIVIWERKTSQATDEEAACPPLKKTNDQHASGEERPATPASRPPARAA
SAETSSLTLPTSAAPAPHSLPQDRAVAQEDHRHSDPRVLADSNVLPLTLEGSVWKTASVFQVTTEAFLPQNTPVAENTGLIKTNTLQLQESPVGSSVSAPCKEKLTQAQLVGLSFPLQVVNTNTQLEL
LNTEHAAITQPVNNAQAAGLVQGVKSGEVAKDPELKQTLSWKTEKLKPETPSVSQVSNLKKKATADPQSVTATSSQNQPPKENQKKPFVGSWVKGLLSRGASFMPSCVSANNRNTITDLQPSVKGARN
FGGFKTKGTKQKASHISKKARRCADQLPAVRNPQPDLPPSGNTAASPRTSENTASEPPLELDRASRGAHLSHPSPGRENGVSSANHGDLAEGQIHKLRLKLLRKLKAKKKKLAALMAASQCGGIPSEN
LENGPQCESPNDCESIEDLLSELQYHIDVADSKSGGTSVSSCNQMHEEILAELLSPGISTELSETGEADVKYLEMGDNHDPAPEPTELTNDPQNIHLKQEHNYCSPTKRSQCDAQAVLQINNACIRTL
NLESPVKTDMFDEFFPTALTLANDTFDLTHFDEYLFENY

hide sequence

Ensembl Acc Id:

ENSCLAP00000004406 ⟸ ENSCLAT00000004489

Protein Domains

USP

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003130	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004489	ENTREZGENE
	ENSCLAT00000004489.1	UniProtKB/TrEMBL
InterPro	DUF4650	UniProtKB/TrEMBL
	Papain-like_cys_pep_sf	UniProtKB/TrEMBL
	Peptidase_C98	UniProtKB/TrEMBL
	USP_dom	UniProtKB/TrEMBL
	USPL1	UniProtKB/TrEMBL
NCBI Gene	Uspl1	ENTREZGENE
PANTHER	PTHR15294	UniProtKB/TrEMBL
	SUMO-SPECIFIC ISOPEPTIDASE USPL1	UniProtKB/TrEMBL
Pfam	DUF4650	UniProtKB/TrEMBL
	Peptidase_C98	UniProtKB/TrEMBL
PROSITE	USP_3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54001	UniProtKB/TrEMBL
UniProt	A0A8C2URE0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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