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Gene: Slc9a9 (solute carrier family 9 member A9) Chinchilla lanigera

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Symbol:

Slc9a9

Name:

solute carrier family 9 member A9

RGD ID:

8825644

Description:

ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); phagosome maturation (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); colorectal cancer (ortholog); FOUND IN early endosome (ortholog); early phagosome (ortholog); phagocytic vesicle membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

sodium/hydrogen exchanger 9; solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955508	2,090,609 - 2,670,240 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955508	2,060,078 - 2,671,792 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

colorectal cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

defense response to bacterium (ISO)

phagosome maturation (ISO)

potassium ion transmembrane transport (ISO)

regulation of intracellular pH (ISO)

sodium ion transmembrane transport (ISO)

Cellular Component

early endosome (ISO)

early phagosome (ISO)

phagocytic vesicle membrane (ISO)

plasma membrane (ISO)

recycling endosome (ISO)

recycling endosome membrane (ISO)

Molecular Function

potassium:proton antiporter activity (ISO)

protein binding (ISO)

sodium:proton antiporter activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Slc9a9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955508	2,090,609 - 2,670,240 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955508	2,060,078 - 2,671,792 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC9A9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	143,265,222 - 143,848,468 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	143,265,222 - 143,848,485 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	142,984,064 - 143,567,310 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	144,466,754 - 145,049,979 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	144,466,762 - 145,049,987	NCBI
Celera	3	141,407,434 - 141,990,172 (-)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI
HuRef	3	140,356,277 - 140,939,100 (-)	NCBI		HuRef
CHM1_1	3	142,947,047 - 143,530,815 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	146,012,562 - 146,595,091 (-)	NCBI		T2T-CHM13v2.0

Slc9a9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	94,551,945 - 95,112,505 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	94,551,962 - 95,112,498 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	94,669,557 - 95,230,453 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	94,669,909 - 95,230,445 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	94,570,311 - 95,130,871 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	94,479,270 - 95,039,797 (+)	NCBI		MGSCv36	mm8
Celera	9	94,219,657 - 94,782,256 (+)	NCBI		Celera
Cytogenetic Map	9	E3.3	NCBI
cM Map	9	49.22	NCBI

Slc9a9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	104,112,279 - 104,675,944 (+)	NCBI		GRCr8
mRatBN7.2	8	95,232,889 - 95,797,262 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	95,232,905 - 95,796,318 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	100,894,442 - 101,454,588 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	99,093,744 - 99,653,850 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	96,937,860 - 97,492,801 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	102,304,095 - 103,022,619 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	102,304,095 - 103,022,619 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	101,786,869 - 101,923,361 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	8	102,104,238 - 102,486,426 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	99,736,831 - 100,324,858 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	99,756,279 - 99,825,026 (+)	NCBI
Celera	8	94,706,240 - 95,249,454 (+)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

SLC9A9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	141,169,708 - 141,752,339 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	141,174,439 - 141,755,370 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	140,292,336 - 140,875,991 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	147,882,700 - 148,466,360 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	147,980,965 - 148,466,151 (-)	Ensembl	panpan1.1		panPan2

SLC9A9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	38,816,387 - 39,471,678 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	38,817,875 - 39,355,217 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	38,779,301 - 39,215,254 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	39,347,537 - 39,885,943 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	39,347,545 - 39,883,515 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	39,031,380 - 39,569,460 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	39,112,236 - 39,650,331 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	39,350,485 - 39,888,833 (-)	NCBI		UU_Cfam_GSD_1.0

Slc9a9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	78,104,005 - 78,644,561 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936540	4,845,212 - 5,384,170 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936540	4,843,798 - 5,384,305 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC9A9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	83,962,618 - 84,502,327 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	83,962,613 - 84,636,878 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	91,734,511 - 92,260,592 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC9A9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	46,781,220 - 47,362,031 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	46,781,271 - 47,360,525 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	19,706,019 - 20,293,405 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc9a9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	19,902,620 - 20,514,160 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	19,902,504 - 20,514,138 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005407728	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005407729	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005407730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01065779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01065791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01114325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000001580 ⟹ ENSCLAP00000001537

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955508	2,090,609 - 2,670,240 (+)	Ensembl

RefSeq Acc Id:

XM_005407728 ⟹ XP_005407785

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955508	2,090,382 - 2,671,792 (+)	NCBI

Sequence:

show sequence

ACCACGCTCTGGAGTTCGAAAAGAGACGTGGCTGCTTTAAGAGAGAAACAGGAAGTTGTAACTG
GAAGCCGGCTGAATGCTAAACCAGGGTAGAATGCTTGTGAAGTAGCAAGTAAAGTAGCAGTGTT
TATTCTGTAATCCTCAGGCAGCCGGACTGTCTTGGGCAAATCTTGATAAAATAGCCTTCATCCA
GGATTTTATCTAAGGAATCCCAAGAAGACGCGAGAATGGAGGGACAACAAAGGTTTATGTCAGA
GAAGGATGGGTATCACTTTCAACATCAGGGAGCCGTGGAGCTGCTCGTCTTTAATTTTTTGCTC
ATCCTTACCATTCTGACAATCTGGTTATTTAAAAACCATCGATTCCGCTTCTTGCACGAAACTG
GAGGAGCGATGGTGTATGGTCTTGTCATGGGATTGATTCTACGATATGCTACAGCACCAACTGA
TATTGAAAGTGGAACTGTCTATGACTGTGGGAAACTGAACTTCAGTCCATCAACTCTTCTGGTT
AATATTACTGATCAAGTTTATGAATATAAATATAAGAGGGAAATAAGCCAGCACAATGTCAGTC
CTCACCAGGGCAATCCCTTACTTGAAAAGATGACATTTGATCCAGAAATCTTCTTCAATGTTTT
ATTGCCACCAATTATATTTCATGCAGGATACAGTCTAAAGAAGAGACACTTTTTTCAAAACTTA
GGATCTATTTTAACATATGCCTTCTTGGGAACTGCCATCTCCTGTATCGTCATAGGGTTAATTG
TATATGGTTTTGTGAAGGCTATGATATATGCTGGTCAGCTGAAAAATGGAGACTTTCATTTTAC
TGACTGTTTATTTTTTGGTTCACTGATGTCAGCTACAGATCCAGTGACAGTGCTGGCCATTTTC
CATGAATTGCACGTCGACCCTGACCTGTATACACTTTTGTTCGGGGAGAGTGTGTTGAATGATG
CAGTGGCCATAGTCCTCACATATTCTATATCCATTTACAGTCCCAAGGAGAATCCGAATGCATT
CGACACTGCAGCATTCTTCCAGTCTGCGGGGAATTTCCTGGGGATCTTCACTGGCTCCTTTGCG
ATGGGGTCCGCGTATGCAGTCGTCACAGCGCTGCTGACCAAATTCACCAAGCTCTGTGAGTTCC
CGATGCTGGAAACAGGCTTGTTTTTCCTGCTTTCTTGGAGTGCCTTCCTGTCTGCTGAGGCAGC
CGGCCTAACAGGAATAGTTGCTGTCCTCTTCTGCGGAGTTACACAGGCGCATTACACCTACAAC
AATCTGTCGTCGGATTCCAAAGTGAGGACGAAACAGTTGTTCGAATTTATGAACTTCTTGGCTG
AGAATGTCATCTTCTGTTACATGGGCCTGGCGCTGTTCACCTTCCAGAACCATATTTTTAATGC
TCTTTTTATACTTGGAGCCTTTCTAGCAATTTTTGTGGCCAGAGCGTGTAACATATATCCCCTC
TCCTTCCTCCTGAATCTGGGACGAACACAGAGGATCCCGTGGAATTTTCAGCACATGATGATGT
TCTCAGGTCTGAGGGGAGCAATCGCATTTGCCTTAGCTATTCGGAACACAGAATCTCAGCCCAA
ACAGATGATGTTTACAACCACGCTGCTCCTGGTATTCTTTACTGTCTGGGTGTTCGGAGGAGGG
ACGACCCCTATGCTTGCTTGGCTTCAGATCAGAGTTGGTGTGGACCTGGAGGAAAATCTGAAGG
AGGAGCCCGCCTCACACCAGGAAGTGAATAACTTGGATAAAAACGTGACCAAAGCAGAGAGCGC
TCGGCTCTTCAGGATGTGGTATGGCTTTGACCACAAATATCTGAAACCAATTTTAACCCACGCT
GGCCCTCCACTGACCACCACACTACCGGAATGGTGTGGGCCAATTTCCAGGCTGCTGACCAGTC
CTCAGGCTTATGGGGAACAGTTAAAAGAGGAGGATGTGGACTGCATTGTAAATCAGGATGAACT
AGCCATGACTTATCAGGAGCAAACCTCCTCCCCCTGCAGTCCTCCGCCAGGGCCAGACGCGGAC
CAGAAAGCTTCACCCCAGACTCCAAGCAAGGAGAACATCTATGAGGGAGACCTGGGCCTAGGAA
GCTATGAACTCAAGCTTGAGCAGACTCTGGGGCAATCCCAGATGAATTAATTGGCATGAAGAGT
GCAGATGTAATCACAAGGAAGGCAAGGCTCCCTGAGGACCACAAGCCAAGATGATGACACTGTA
CAGGGGAGAGGCTGGAAAATGTATTAAGAGCATAAATTGGAGATGATCAAAACCTTGTCTGGTG
CCTGCAGAAATGAGAATTTATTATCAGTGCTCTATATTATGCAACTGAACTTAATTGTTTATCA
GCAGCCAGTTTTACTTGTAGACTGGGTGGGATGTGGGAAGGGGGAATCAGGAACCAAATGTACT
GGGTCTGAGGGGCATATCTATTCTGTGGACAAGTCTCCGGGCCCTTCACTTGCATTTTATTCCC
TTCCTTAAATAGAGTTAAAAACAAGGAAAAGAGCTTCTGAGTGTAAGCATGCTTTGCCTAAATT
GAAGGGAATGTCCAGTTGTTTAGTAAGTGAGAAGTTCTGTATTTGTAGAACTTGCCCCTGGGAC
TGTGTGCAGATCCAGGGAGGCATTCAGCACCCACCTCTGATGGCCTCATAGAACCCGCACGGAG
TTGGGAGCCTACTGTTCTGGTTGGCATCCTTGCCGTGCTGCTTCTGCCCTTGGTCGAAGGGATC
ATGCACAGCAGGGTGTGCTAATGCTAAATGCAGTGTCGCTTTCTGGCTACATAGGACCCCTTGC
AGGGAAAGCTTGTTTTCCTTTCTAATATGATGTTTTACCCGCAGAGTGAGCCTTGCTTGCTTGC
TTGTTTGCATGCACTTCTGGGCTCTGCAGTAGGGCCCCTCTACATGTGGGGTAATAATATTTCA
CAGCACAAGTTGCTCTCCACATGGCAGGAGACTGTGCAGGAACCCCAGTCTGGTCCCCAGTTCA
GCACTCACAGCTGGTTAACAGCACAGAAGCAGCTGCTAATGAGTGGGTCATGATAAGGAACCAG
GGACAAGACATCACAACTGCCTCTTACCAGTCATGGCTCACGGCCCATGTTAGAGAGACCAACA
CAATAATTCTGCTTTTAATTCTGCTGCATGACCTGTGCCTTTGAAGCCAGAAGATACCTCAAGC
CTAAGTTCTCTTGAAACACAGATGTTAATAGTAGACTCCAGACCAGGCATGGTGGTACATGCTT
GTAATCCCAGTACTCAGGAGGCTGAGGCAGGAGAATCGTCACAATTTCCAGGCCAGTCGGGGCT
ACAGAGTGAGTTCAAGACCAGCCTGAACTATGGCGAGACTCTGTTTCAAAAAAAAATAGTAGAC
TCCAAAAAGCAAGCTCCAGGCCTACATGCCAGGTTCTGCTGAGCCTCCACCTGAGGGAGGCAGA
GCAAGATGTCTTCCTCAAGCCCAGTATTTAAACTAATGTATGCTTTGCATACCACTTGTTAGGC
CTTAAACATTAGGTGTGGTGGCATAGGGAATAATTCTGTATGCATTTCTTTTCTTGCTTTCCAA
ATAGGAGATTCTGGGGGAATAAATTATTTTATACTCAATTTACAATCTTGTCATTCCAGGTAAA
AATGACAAGTGGAGAAGCATGATGTTTTCTAATTTCACTTCATCCTAATAAAATTTTGTTATCA
AG

hide sequence

RefSeq Acc Id:

XM_005407729 ⟹ XP_005407786

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955508	2,102,383 - 2,671,792 (+)	NCBI

Sequence:

show sequence

GGCGTCTGGATGTAACAACCAGTGCATGAAGAAGCCGAGGTTTGCCCACTGACCTTCACAAGCT
GCCAAGACCCCATGCAGATACTACCTTGGGCTTCTTCTCCTTGCATCTCACTTGGGTCTTGTCA
TGGGATTGATTCTACGATATGCTACAGCACCAACTGATATTGAAAGTGGAACTGTCTATGACTG
TGGGAAACTGAACTTCAGTCCATCAACTCTTCTGGTTAATATTACTGATCAAGTTTATGAATAT
AAATATAAGAGGGAAATAAGCCAGCACAATGTCAGTCCTCACCAGGGCAATCCCTTACTTGAAA
AGATGACATTTGATCCAGAAATCTTCTTCAATGTTTTATTGCCACCAATTATATTTCATGCAGG
ATACAGTCTAAAGAAGAGACACTTTTTTCAAAACTTAGGATCTATTTTAACATATGCCTTCTTG
GGAACTGCCATCTCCTGTATCGTCATAGGGTTAATTGTATATGGTTTTGTGAAGGCTATGATAT
ATGCTGGTCAGCTGAAAAATGGAGACTTTCATTTTACTGACTGTTTATTTTTTGGTTCACTGAT
GTCAGCTACAGATCCAGTGACAGTGCTGGCCATTTTCCATGAATTGCACGTCGACCCTGACCTG
TATACACTTTTGTTCGGGGAGAGTGTGTTGAATGATGCAGTGGCCATAGTCCTCACATATTCTA
TATCCATTTACAGTCCCAAGGAGAATCCGAATGCATTCGACACTGCAGCATTCTTCCAGTCTGC
GGGGAATTTCCTGGGGATCTTCACTGGCTCCTTTGCGATGGGGTCCGCGTATGCAGTCGTCACA
GCGCTGCTGACCAAATTCACCAAGCTCTGTGAGTTCCCGATGCTGGAAACAGGCTTGTTTTTCC
TGCTTTCTTGGAGTGCCTTCCTGTCTGCTGAGGCAGCCGGCCTAACAGGAATAGTTGCTGTCCT
CTTCTGCGGAGTTACACAGGCGCATTACACCTACAACAATCTGTCGTCGGATTCCAAAGTGAGG
ACGAAACAGTTGTTCGAATTTATGAACTTCTTGGCTGAGAATGTCATCTTCTGTTACATGGGCC
TGGCGCTGTTCACCTTCCAGAACCATATTTTTAATGCTCTTTTTATACTTGGAGCCTTTCTAGC
AATTTTTGTGGCCAGAGCGTGTAACATATATCCCCTCTCCTTCCTCCTGAATCTGGGACGAACA
CAGAGGATCCCGTGGAATTTTCAGCACATGATGATGTTCTCAGGTCTGAGGGGAGCAATCGCAT
TTGCCTTAGCTATTCGGAACACAGAATCTCAGCCCAAACAGATGATGTTTACAACCACGCTGCT
CCTGGTATTCTTTACTGTCTGGGTGTTCGGAGGAGGGACGACCCCTATGCTTGCTTGGCTTCAG
ATCAGAGTTGGTGTGGACCTGGAGGAAAATCTGAAGGAGGAGCCCGCCTCACACCAGGAAGTGA
ATAACTTGGATAAAAACGTGACCAAAGCAGAGAGCGCTCGGCTCTTCAGGATGTGGTATGGCTT
TGACCACAAATATCTGAAACCAATTTTAACCCACGCTGGCCCTCCACTGACCACCACACTACCG
GAATGGTGTGGGCCAATTTCCAGGCTGCTGACCAGTCCTCAGGCTTATGGGGAACAGTTAAAAG
AGGAGGATGTGGACTGCATTGTAAATCAGGATGAACTAGCCATGACTTATCAGGAGCAAACCTC
CTCCCCCTGCAGTCCTCCGCCAGGGCCAGACGCGGACCAGAAAGCTTCACCCCAGACTCCAAGC
AAGGAGAACATCTATGAGGGAGACCTGGGCCTAGGAAGCTATGAACTCAAGCTTGAGCAGACTC
TGGGGCAATCCCAGATGAATTAATTGGCATGAAGAGTGCAGATGTAATCACAAGGAAGGCAAGG
CTCCCTGAGGACCACAAGCCAAGATGATGACACTGTACAGGGGAGAGGCTGGAAAATGTATTAA
GAGCATAAATTGGAGATGATCAAAACCTTGTCTGGTGCCTGCAGAAATGAGAATTTATTATCAG
TGCTCTATATTATGCAACTGAACTTAATTGTTTATCAGCAGCCAGTTTTACTTGTAGACTGGGT
GGGATGTGGGAAGGGGGAATCAGGAACCAAATGTACTGGGTCTGAGGGGCATATCTATTCTGTG
GACAAGTCTCCGGGCCCTTCACTTGCATTTTATTCCCTTCCTTAAATAGAGTTAAAAACAAGGA
AAAGAGCTTCTGAGTGTAAGCATGCTTTGCCTAAATTGAAGGGAATGTCCAGTTGTTTAGTAAG
TGAGAAGTTCTGTATTTGTAGAACTTGCCCCTGGGACTGTGTGCAGATCCAGGGAGGCATTCAG
CACCCACCTCTGATGGCCTCATAGAACCCGCACGGAGTTGGGAGCCTACTGTTCTGGTTGGCAT
CCTTGCCGTGCTGCTTCTGCCCTTGGTCGAAGGGATCATGCACAGCAGGGTGTGCTAATGCTAA
ATGCAGTGTCGCTTTCTGGCTACATAGGACCCCTTGCAGGGAAAGCTTGTTTTCCTTTCTAATA
TGATGTTTTACCCGCAGAGTGAGCCTTGCTTGCTTGCTTGTTTGCATGCACTTCTGGGCTCTGC
AGTAGGGCCCCTCTACATGTGGGGTAATAATATTTCACAGCACAAGTTGCTCTCCACATGGCAG
GAGACTGTGCAGGAACCCCAGTCTGGTCCCCAGTTCAGCACTCACAGCTGGTTAACAGCACAGA
AGCAGCTGCTAATGAGTGGGTCATGATAAGGAACCAGGGACAAGACATCACAACTGCCTCTTAC
CAGTCATGGCTCACGGCCCATGTTAGAGAGACCAACACAATAATTCTGCTTTTAATTCTGCTGC
ATGACCTGTGCCTTTGAAGCCAGAAGATACCTCAAGCCTAAGTTCTCTTGAAACACAGATGTTA
ATAGTAGACTCCAGACCAGGCATGGTGGTACATGCTTGTAATCCCAGTACTCAGGAGGCTGAGG
CAGGAGAATCGTCACAATTTCCAGGCCAGTCGGGGCTACAGAGTGAGTTCAAGACCAGCCTGAA
CTATGGCGAGACTCTGTTTCAAAAAAAAATAGTAGACTCCAAAAAGCAAGCTCCAGGCCTACAT
GCCAGGTTCTGCTGAGCCTCCACCTGAGGGAGGCAGAGCAAGATGTCTTCCTCAAGCCCAGTAT
TTAAACTAATGTATGCTTTGCATACCACTTGTTAGGCCTTAAACATTAGGTGTGGTGGCATAGG
GAATAATTCTGTATGCATTTCTTTTCTTGCTTTCCAAATAGGAGATTCTGGGGGAATAAATTAT
TTTATACTCAATTTACAATCTTGTCATTCCAGGTAAAAATGACAAGTGGAGAAGCATGATGTTT
TCTAATTTCACTTCATCCTAATAAAATTTTGTTATCAAG

hide sequence

RefSeq Acc Id:

XM_005407730 ⟹ XP_005407787

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955508	2,060,078 - 2,671,792 (+)	NCBI

Sequence:

show sequence

CTTTCTTTGCTTGTTGCCTCCCTGCTGGATTTTCAGAGTGAAGTCAGACCCAATTCTCTGTGGG
GCTGAAATTTCACCAGGGGTCTTGTCATGGGATTGATTCTACGATATGCTACAGCACCAACTGA
TATTGAAAGTGGAACTGTCTATGACTGTGGGAAACTGAACTTCAGTCCATCAACTCTTCTGGTT
AATATTACTGATCAAGTTTATGAATATAAATATAAGAGGGAAATAAGCCAGCACAATGTCAGTC
CTCACCAGGGCAATCCCTTACTTGAAAAGATGACATTTGATCCAGAAATCTTCTTCAATGTTTT
ATTGCCACCAATTATATTTCATGCAGGATACAGTCTAAAGAAGAGACACTTTTTTCAAAACTTA
GGATCTATTTTAACATATGCCTTCTTGGGAACTGCCATCTCCTGTATCGTCATAGGGTTAATTG
TATATGGTTTTGTGAAGGCTATGATATATGCTGGTCAGCTGAAAAATGGAGACTTTCATTTTAC
TGACTGTTTATTTTTTGGTTCACTGATGTCAGCTACAGATCCAGTGACAGTGCTGGCCATTTTC
CATGAATTGCACGTCGACCCTGACCTGTATACACTTTTGTTCGGGGAGAGTGTGTTGAATGATG
CAGTGGCCATAGTCCTCACATATTCTATATCCATTTACAGTCCCAAGGAGAATCCGAATGCATT
CGACACTGCAGCATTCTTCCAGTCTGCGGGGAATTTCCTGGGGATCTTCACTGGCTCCTTTGCG
ATGGGGTCCGCGTATGCAGTCGTCACAGCGCTGCTGACCAAATTCACCAAGCTCTGTGAGTTCC
CGATGCTGGAAACAGGCTTGTTTTTCCTGCTTTCTTGGAGTGCCTTCCTGTCTGCTGAGGCAGC
CGGCCTAACAGGAATAGTTGCTGTCCTCTTCTGCGGAGTTACACAGGCGCATTACACCTACAAC
AATCTGTCGTCGGATTCCAAAGTGAGGACGAAACAGTTGTTCGAATTTATGAACTTCTTGGCTG
AGAATGTCATCTTCTGTTACATGGGCCTGGCGCTGTTCACCTTCCAGAACCATATTTTTAATGC
TCTTTTTATACTTGGAGCCTTTCTAGCAATTTTTGTGGCCAGAGCGTGTAACATATATCCCCTC
TCCTTCCTCCTGAATCTGGGACGAACACAGAGGATCCCGTGGAATTTTCAGCACATGATGATGT
TCTCAGGTCTGAGGGGAGCAATCGCATTTGCCTTAGCTATTCGGAACACAGAATCTCAGCCCAA
ACAGATGATGTTTACAACCACGCTGCTCCTGGTATTCTTTACTGTCTGGGTGTTCGGAGGAGGG
ACGACCCCTATGCTTGCTTGGCTTCAGATCAGAGTTGGTGTGGACCTGGAGGAAAATCTGAAGG
AGGAGCCCGCCTCACACCAGGAAGTGAATAACTTGGATAAAAACGTGACCAAAGCAGAGAGCGC
TCGGCTCTTCAGGATGTGGTATGGCTTTGACCACAAATATCTGAAACCAATTTTAACCCACGCT
GGCCCTCCACTGACCACCACACTACCGGAATGGTGTGGGCCAATTTCCAGGCTGCTGACCAGTC
CTCAGGCTTATGGGGAACAGTTAAAAGAGGAGGATGTGGACTGCATTGTAAATCAGGATGAACT
AGCCATGACTTATCAGGAGCAAACCTCCTCCCCCTGCAGTCCTCCGCCAGGGCCAGACGCGGAC
CAGAAAGCTTCACCCCAGACTCCAAGCAAGGAGAACATCTATGAGGGAGACCTGGGCCTAGGAA
GCTATGAACTCAAGCTTGAGCAGACTCTGGGGCAATCCCAGATGAATTAATTGGCATGAAGAGT
GCAGATGTAATCACAAGGAAGGCAAGGCTCCCTGAGGACCACAAGCCAAGATGATGACACTGTA
CAGGGGAGAGGCTGGAAAATGTATTAAGAGCATAAATTGGAGATGATCAAAACCTTGTCTGGTG
CCTGCAGAAATGAGAATTTATTATCAGTGCTCTATATTATGCAACTGAACTTAATTGTTTATCA
GCAGCCAGTTTTACTTGTAGACTGGGTGGGATGTGGGAAGGGGGAATCAGGAACCAAATGTACT
GGGTCTGAGGGGCATATCTATTCTGTGGACAAGTCTCCGGGCCCTTCACTTGCATTTTATTCCC
TTCCTTAAATAGAGTTAAAAACAAGGAAAAGAGCTTCTGAGTGTAAGCATGCTTTGCCTAAATT
GAAGGGAATGTCCAGTTGTTTAGTAAGTGAGAAGTTCTGTATTTGTAGAACTTGCCCCTGGGAC
TGTGTGCAGATCCAGGGAGGCATTCAGCACCCACCTCTGATGGCCTCATAGAACCCGCACGGAG
TTGGGAGCCTACTGTTCTGGTTGGCATCCTTGCCGTGCTGCTTCTGCCCTTGGTCGAAGGGATC
ATGCACAGCAGGGTGTGCTAATGCTAAATGCAGTGTCGCTTTCTGGCTACATAGGACCCCTTGC
AGGGAAAGCTTGTTTTCCTTTCTAATATGATGTTTTACCCGCAGAGTGAGCCTTGCTTGCTTGC
TTGTTTGCATGCACTTCTGGGCTCTGCAGTAGGGCCCCTCTACATGTGGGGTAATAATATTTCA
CAGCACAAGTTGCTCTCCACATGGCAGGAGACTGTGCAGGAACCCCAGTCTGGTCCCCAGTTCA
GCACTCACAGCTGGTTAACAGCACAGAAGCAGCTGCTAATGAGTGGGTCATGATAAGGAACCAG
GGACAAGACATCACAACTGCCTCTTACCAGTCATGGCTCACGGCCCATGTTAGAGAGACCAACA
CAATAATTCTGCTTTTAATTCTGCTGCATGACCTGTGCCTTTGAAGCCAGAAGATACCTCAAGC
CTAAGTTCTCTTGAAACACAGATGTTAATAGTAGACTCCAGACCAGGCATGGTGGTACATGCTT
GTAATCCCAGTACTCAGGAGGCTGAGGCAGGAGAATCGTCACAATTTCCAGGCCAGTCGGGGCT
ACAGAGTGAGTTCAAGACCAGCCTGAACTATGGCGAGACTCTGTTTCAAAAAAAAATAGTAGAC
TCCAAAAAGCAAGCTCCAGGCCTACATGCCAGGTTCTGCTGAGCCTCCACCTGAGGGAGGCAGA
GCAAGATGTCTTCCTCAAGCCCAGTATTTAAACTAATGTATGCTTTGCATACCACTTGTTAGGC
CTTAAACATTAGGTGTGGTGGCATAGGGAATAATTCTGTATGCATTTCTTTTCTTGCTTTCCAA
ATAGGAGATTCTGGGGGAATAAATTATTTTATACTCAATTTACAATCTTGTCATTCCAGGTAAA
AATGACAAGTGGAGAAGCATGATGTTTTCTAATTTCACTTCATCCTAATAAAATTTTGTTATCA
AG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005407785	(Get FASTA)	NCBI Sequence Viewer
	XP_005407786	(Get FASTA)	NCBI Sequence Viewer
	XP_005407787	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000001537
	ENSCLAP00000001537.1

RefSeq Acc Id:

XP_005407787 ⟸ XM_005407730

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGLILRYATAPTDIESGTVYDCGKLNFSPSTLLVNITDQVYEYKYKREISQHNVSPHQGNPLLE
KMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCIVIGLIVYGFVKAMI
YAGQLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYS
ISIYSPKENPNAFDTAAFFQSAGNFLGIFTGSFAMGSAYAVVTALLTKFTKLCEFPMLETGLFF
LLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKVRTKQLFEFMNFLAENVIFCYMG
LALFTFQNHIFNALFILGAFLAIFVARACNIYPLSFLLNLGRTQRIPWNFQHMMMFSGLRGAIA
FALAIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLAWLQIRVGVDLEENLKEEPASHQEV
NNLDKNVTKAESARLFRMWYGFDHKYLKPILTHAGPPLTTTLPEWCGPISRLLTSPQAYGEQLK
EEDVDCIVNQDELAMTYQEQTSSPCSPPPGPDADQKASPQTPSKENIYEGDLGLGSYELKLEQT
LGQSQMN

hide sequence

RefSeq Acc Id:	XP_005407785 ⟸ XM_005407728
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJN6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGQQRFMSEKDGYHFQHQGAVELLVFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLVMGL ILRYATAPTDIESGTVYDCGKLNFSPSTLLVNITDQVYEYKYKREISQHNVSPHQGNPLLEKMT FDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCIVIGLIVYGFVKAMIYAG QLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSISI YSPKENPNAFDTAAFFQSAGNFLGIFTGSFAMGSAYAVVTALLTKFTKLCEFPMLETGLFFLLS WSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKVRTKQLFEFMNFLAENVIFCYMGLAL FTFQNHIFNALFILGAFLAIFVARACNIYPLSFLLNLGRTQRIPWNFQHMMMFSGLRGAIAFAL AIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLAWLQIRVGVDLEENLKEEPASHQEVNNL DKNVTKAESARLFRMWYGFDHKYLKPILTHAGPPLTTTLPEWCGPISRLLTSPQAYGEQLKEED VDCIVNQDELAMTYQEQTSSPCSPPPGPDADQKASPQTPSKENIYEGDLGLGSYELKLEQTLGQ SQMN hide sequence

RefSeq Acc Id:

XP_005407786 ⟸ XM_005407729

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGLILRYATAPTDIESGTVYDCGKLNFSPSTLLVNITDQVYEYKYKREISQHNVSPHQGNPLLE
KMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCIVIGLIVYGFVKAMI
YAGQLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYS
ISIYSPKENPNAFDTAAFFQSAGNFLGIFTGSFAMGSAYAVVTALLTKFTKLCEFPMLETGLFF
LLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKVRTKQLFEFMNFLAENVIFCYMG
LALFTFQNHIFNALFILGAFLAIFVARACNIYPLSFLLNLGRTQRIPWNFQHMMMFSGLRGAIA
FALAIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLAWLQIRVGVDLEENLKEEPASHQEV
NNLDKNVTKAESARLFRMWYGFDHKYLKPILTHAGPPLTTTLPEWCGPISRLLTSPQAYGEQLK
EEDVDCIVNQDELAMTYQEQTSSPCSPPPGPDADQKASPQTPSKENIYEGDLGLGSYELKLEQT
LGQSQMN

hide sequence

Ensembl Acc Id:

ENSCLAP00000001537 ⟸ ENSCLAT00000001580

Protein Domains

Cation/H+ exchanger

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000001151	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000001580	ENTREZGENE
	ENSCLAT00000001580.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.1330	UniProtKB/TrEMBL
InterPro	Cation/H_exchanger	UniProtKB/TrEMBL
	Cation/H_exchanger_CPA1	UniProtKB/TrEMBL
	NaH_exchanger	UniProtKB/TrEMBL
	NHE6_7_9	UniProtKB/TrEMBL
NCBI Gene	Slc9a9	ENTREZGENE
PANTHER	PTHR10110	UniProtKB/TrEMBL
	PTHR10110:SF61	UniProtKB/TrEMBL
Pfam	Na_H_Exchanger	UniProtKB/TrEMBL
PRINTS	NAHEXCHNGR	UniProtKB/TrEMBL
	NAHEXCHNGR6	UniProtKB/TrEMBL
UniProt	A0A8C2UJN6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Slc9a9	solute carrier family 9 member A9		solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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