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Gene: Zup1 (zinc finger containing ubiquitin peptidase 1) Chinchilla lanigera

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Symbol:

Zup1

Name:

zinc finger containing ubiquitin peptidase 1

RGD ID:

8800379

Description:

ASSOCIATED WITH body dysmorphic disorder (ortholog); congenital disorder of glycosylation Iaa (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc finger with UFM1 specific peptidase domain; zinc finger with UFM1-specific peptidase domain; Zufsp

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	2,057 - 33,251 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955436	1,001 - 28,469 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zup1	Chinchilla	body dysmorphic disorder		ISO	RGD:1316997	8554872	ClinVar Annotator: match by term: Dysmorphic features	ClinVar	PMID:24824130
Zup1	Chinchilla	congenital disorder of glycosylation Iaa		ISO	RGD:1316997	8554872	ClinVar Annotator: match by term: Congenital disorder of glycosylation, type IAA	ClinVar	PMID:28492532\|PMID:29100083\|PMID:31273557
Zup1	Chinchilla	intellectual disability		ISO	RGD:1316997	8554872	ClinVar Annotator: match by term: Intellectual functioning disability	ClinVar	PMID:24824130
Zup1	Chinchilla	microcephaly		ISO	RGD:1316997	8554872	ClinVar Annotator: match by term: Microcephaly	ClinVar	PMID:24824130
Zup1	Chinchilla	primary ciliary dyskinesia		ISO	RGD:1316997	8554872	ClinVar Annotator: match by term: Primary ciliary dyskinesia	ClinVar	PMID:28492532
Zup1	Chinchilla	Tremor		ISO	RGD:1316997	8554872	ClinVar Annotator: match by term: Tremor	ClinVar	PMID:24824130

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zup1	Chinchilla	cytosol	located_in	ISO	RGD:1316997	9068941		HPA	GO_REF:0000052
Zup1	Chinchilla	nucleoplasm	located_in	ISO	RGD:1316997	9068941		HPA	GO_REF:0000052

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Zup1	Chinchilla	protein binding	enables	ISO	UniProtKB:Q8WVC2	9068941	PMID:25416956	IntAct	PMID:25416956
Zup1	Chinchilla	protein binding	enables	ISO	UniProtKB:P50281\|UniProtKB:Q92619	9068941	PMID:32296183	IntAct	PMID:32296183

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Zup1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	2,057 - 33,251 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955436	1,001 - 28,469 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZUP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	116,635,618 - 116,668,766 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	116,635,618 - 116,668,794 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	116,956,781 - 116,989,929 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	117,063,474 - 117,096,652 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	117,063,473 - 117,096,650	NCBI
Celera	6	117,699,849 - 117,733,039 (-)	NCBI		Celera
Cytogenetic Map	6	q22.1	NCBI
HuRef	6	114,536,357 - 114,569,549 (-)	NCBI		HuRef
CHM1_1	6	117,220,405 - 117,253,587 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	117,819,329 - 117,852,469 (-)	NCBI		T2T-CHM13v2.0

Zup1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	33,795,138 - 33,827,316 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	33,795,138 - 33,827,265 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	33,919,142 - 33,951,294 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	33,919,142 - 33,951,269 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	33,646,742 - 33,671,018 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	33,616,352 - 33,648,207 (-)	NCBI		MGSCv36	mm8
Celera	10	34,837,312 - 34,861,586 (-)	NCBI		Celera
Cytogenetic Map	10	B1	NCBI
cM Map	10	18.85	NCBI

Zup1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	31,327,939 - 31,358,088 (-)	NCBI		GRCr8
mRatBN7.2	20	30,785,226 - 30,815,377 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	30,785,227 - 30,815,306 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	31,796,148 - 31,826,237 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	31,187,068 - 31,217,157 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	31,923,787 - 31,953,877 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	32,471,670 - 32,501,693 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	32,471,672 - 32,501,722 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	34,255,576 - 34,285,599 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	30,096,106 - 30,126,201 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	30,109,906 - 30,140,001 (-)	NCBI
Celera	20	32,202,226 - 32,232,242 (-)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

ZUP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	136,649,403 - 136,682,936 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	134,542,421 - 134,575,953 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	114,443,844 - 114,477,220 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	118,588,455 - 118,621,123 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	118,598,031 - 118,621,081 (-)	Ensembl	panpan1.1		panPan2

ZUP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	57,076,730 - 57,108,527 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	57,067,005 - 57,106,837 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	57,875,202 - 57,903,637 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	57,261,956 - 57,290,387 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	57,261,962 - 57,290,365 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	57,156,332 - 57,184,769 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	57,004,493 - 57,032,925 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	57,633,012 - 57,661,676 (-)	NCBI		UU_Cfam_GSD_1.0

Zup1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	107,802,407 - 107,823,359 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004937068	21,276 - 42,264 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004937068	21,312 - 42,266 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZUP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	44,939,951 - 44,961,145 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	44,939,914 - 45,013,764 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	50,212,885 - 50,235,181 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZUP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	57,146,150 - 57,172,473 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	57,146,172 - 57,177,127 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	29,480,575 - 29,506,919 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zup1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624798	12,991,865 - 13,021,268 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624798	12,992,315 - 13,021,450 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005389112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005389113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005389114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01033529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01033530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01087215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000011571 ⟹ ENSCLAP00000011434

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955436	2,057 - 33,251 (+)	Ensembl

RefSeq Acc Id:

XM_005389112 ⟹ XP_005389169

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955436	1,001 - 28,469 (+)	NCBI

Sequence:

show sequence

CCCTAACGGAAGGCGGGCGAGCGCGCCGCCGGGACCGCGCCTCTTCCGGGCGCGCGGCTGTGGACCTGCTGCCGGGACGGGGGCGGTCCTTGGCGTCTCCGCGGCTTTTCTGGGTGCACTGTGCCGCT
GCGATAGGTGGCGAGCCCGGCTGTAGCCTTCCCGGCGGGGAGAGACGCTCCGCCCCGCACAGTGCTGGCCTGCGGGACGCCCGGCTCTCGGGCGGAGGAGCCGAGCGGAAGGAGGAAGCCGGGCTGGC
GGCGGCCGGCTCTCGGCCGATTTTGGAGTATTTGCACATGCGGAATGAGATACCATGAGGATGGGACCCAAGCATAAACATGAAATTCATTTGTTTCATTTACAGTTGATACACATAGCCTGAAGCTA
CCAATCTTACCATGCTTCCCTGTGATATTTGTGGTGAAATGGTAACCTCAGAATCGGATATGAAGACTCACCTCTTAATTGTTCACATGGAAAATGAAGTTGTATGTCCATTTTGCAAGTTGTCAGGT
GTCAATTATGATGAAATGTGCTTTCACATTGAAACTGCTCATTTTGAGCAGAATACTCTAGAAAGAAACTTTGAGAGGGTGAACCCAATGCAGTATGGAACTTCAGATAACAAGGACAGCACTCTGCA
GACTACGATGGAAGCTTGTGCATCTAGTCATCCAAAATGTTCAGCTCAAAGCCTTCCTACAGATGGTACTTTAAAACATGAAGTCTTTTATTCAGAGAACTTAACTGGACCTAGAAAATTCCTGAAAA
GTAGGGAAAACCAGTCTGACTTATTTGAAACAAAAGAATCAATTTATGACACAATGTATAGTCCTCCTGAATGTCCATTCTGTGGAAAGATAGAAGAATGTAGTCAAGATATGGAAAATCATGTGAAA
ACAAAGCATGTCAGTCTTTTAGACCCACCATTAGAAGACTGTGATCAAGCATTGTATGACTGCCCTATGTGTGGGCTCGTCTGTACAAACTACCATATTCTCCAGGAACATGTTGACTTGCATTTAGA
AGAAAGGAGCTTTCAACAAGGCATGGATAGAATTCAGTGTTCTGCTGATCTAGAATTGGCTCACCAGCTTCAGCAGGAAGAAGATCGGAAGCAATCTGAGGAATCAAGACAAGAAATGCAGGAATTCC
AGCAGCTGCAGCAACAATATGGTTTAGATGGGTCTGGAGGATATAAACAACACCAACTGCGAAATATGGAAATAGAAGTAAATAGAGGAAGAATGCACCCGACTGAGTTTCACAGGAGAAAAGCTGAC
CTTATGGAATCCCTAGCTGTTGGTATTGATGATGGAAAAACAAAAACTTCTGGAATTATTGAAGCACTTCATAGATACTATCAGAGTACTGCCACAGATGTGAGGCGTGTGTGGCTTTCTGCAGTGGT
AGATCACTTTCATTCCTCTCTAGGTGACAAAGGTTGGGGTTGTGGTTACAGAAATTTCCAAATGCTACTTTCATCATTATTACAGAATGAGGCTTATGATGATTGCTTGAAAGGTATGTCAGTTCCTT
GTATTCCAAAAATTCAGTCTATGATTGAAGATGCATGGAAAGAAGGTTTTGACCCTCAGGGGGCCTCTCAACTTAATAACAGGTTACAGGGAACAAAAGCCTGGATTGGAGCATGTGAAGTATTTACC
CTCCTGACTTCCCTGAGGGTCAAGTGCCGTATTGTTGATTTTCACAAGGCAACTGGTCCTTCGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATTACTCTTCAGAGCAGGAAGGGAATGC
AAAGGTAGTATGCACATCCAAACCTCCTATCTATCTCCAGCATCAAGGTCATAGTCGAACAGTTGTTGGAATTGAAGAGAGAAAAAACAGAACATTATGTTTACTAATATTTGATCCTGGATGTCCTT
CCCGAGAAGTGCAGAAACTGTTAAAACAAGACCTTGAGGCGAGTAGTCTCAAGCAACTTAGGAAATTCGTGGGGAATCTAAAACATAAGCAATACCAGATAGTGGCAATAGAGGGTGCTCTTTCTCCA
GAGGAGAAAGCGGCCAGGAGACAAGCTTCTCAAGTCTTTACAGCGGAGAAGATTCCTTGAAGAATTAAGCTTTTTGGTGATTATGGCATTGCCCTTTGTTTTCCAAACTCTGATATGGAACTCTTTAA
TACAACTTAAGAATCTGCAAATTCTCTTAAGTGCTCAACATGTTTGCCTACATTACATTTTACCTTAAAAAAAAATTAAACCTTTAGTGCTTTATTATCTACTAATTGTTTCAATAAAATATTTTCTT
TGCACTGAAA

hide sequence

RefSeq Acc Id:

XM_005389113 ⟹ XP_005389170

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955436	1,001 - 28,469 (+)	NCBI

Sequence:

show sequence

CCCTAACGGAAGGCGGGCGAGCGCGCCGCCGGGACCGCGCCTCTTCCGGGCGCGCGGCTGTGGA
CCTGCTGCCGGGACGGGGGCGGTCCTTGGCGTCTCCGCGGCTTTTCTGGGTGCACTGTGCCGCTGCGATAGGTGGCGAGCCCGGCTGTAGCCTTCCCGGCGGGGAGAGACGCTCCGCCCCGCACAGTG
CTGGCCTGCGGGACGCCCGGCTCTCGGGCGGAGGAGCCGAGCGGAAGGAGGAAGCCGGGCTGGCGGCGGCCGGCTCTCGGCCGATTTTTTTCAGATTTTGGAGTATTTGCACATGCGGAATGAGATAC
CATGAGGATGGGACCCAAGCATAAACATGAAATTCATTTGTTTCATTTACAGTTGATACACATAGCCTGAAGCTACCAATCTTACCATGCTTCCCTGTGATATTTGTGGTGAAATGGTAACCTCAGAA
TCGGATATGAAGACTCACCTCTTAATTGTTCACATGGAAAATGAAGTTGTATGTCCATTTTGCAAGTTGTCAGGTGTCAATTATGATGAAATGTGCTTTCACATTGAAACTGCTCATTTTGAGCAGAA
TACTCTAGAAAGAAACTTTGAGAGGGTGAACCCAATGCAGTATGGAACTTCAGATAACAAGGACAGCACTCTGCAGACTACGATGGAAGCTTGTGCATCTAGTCATCCAAAATGTTCAGCTCAAAGCC
TTCCTACAGATGGTACTTTAAAACATGAAGTCTTTTATTCAGAGAACTTAACTGGACCTAGAAAATTCCTGAAAAGTAGGGAAAACCAGTCTGACTTATTTGAAACAAAAGAATCAATTTATGACACA
ATGTATAGTCCTCCTGAATGTCCATTCTGTGGAAAGATAGAAGAATGTAGTCAAGATATGGAAAATCATGTGAAAACAAAGCATGTCAGTCTTTTAGACCCACCATTAGAAGACTGTGATCAAGCATT
GTATGACTGCCCTATGTGTGGGCTCGTCTGTACAAACTACCATATTCTCCAGGAACATGTTGACTTGCATTTAGAAGAAAGGAGCTTTCAACAAGGCATGGATAGAATTCAGTGTTCTGCTGATCTAG
AATTGGCTCACCAGCTTCAGCAGGAAGAAGATCGGAAGCAATCTGAGGAATCAAGACAAGAAATGCAGGAATTCCAGCAGCTGCAGCAACAATATGGTTTAGATGGGTCTGGAGGATATAAACAACAC
CAACTGCGAAATATGGAAATAGAAGTAAATAGAGGAAGAATGCACCCGACTGAGTTTCACAGGAGAAAAGCTGACCTTATGGAATCCCTAGCTGTTGGTATTGATGATGGAAAAACAAAAACTTCTGG
AATTATTGAAGCACTTCATAGATACTATCAGAGTACTGCCACAGATGTGAGGCGTGTGTGGCTTTCTGCAGTGGTAGATCACTTTCATTCCTCTCTAGGTGACAAAGGTTGGGGTTGTGGTTACAGAA
ATTTCCAAATGCTACTTTCATCATTATTACAGAATGAGGCTTATGATGATTGCTTGAAAGGTATGTCAGTTCCTTGTATTCCAAAAATTCAGTCTATGATTGAAGATGCATGGAAAGAAGGTTTTGAC
CCTCAGGGGGCCTCTCAACTTAATAACAGGTTACAGGGAACAAAAGCCTGGATTGGAGCATGTGAAGTATTTACCCTCCTGACTTCCCTGAGGGTCAAGTGCCGTATTGTTGATTTTCACAAGGCAAC
TGGTCCTTCGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATTACTCTTCAGAGCAGGAAGGGAATGCAAAGGTAGTATGCACATCCAAACCTCCTATCTATCTCCAGCATCAAGGTCATA
GTCGAACAGTTGTTGGAATTGAAGAGAGAAAAAACAGAACATTATGTTTACTAATATTTGATCCTGGATGTCCTTCCCGAGAAGTGCAGAAACTGTTAAAACAAGACCTTGAGGCGAGTAGTCTCAAG
CAACTTAGGAAATTCGTGGGGAATCTAAAACATAAGCAATACCAGATAGTGGCAATAGAGGGTGCTCTTTCTCCAGAGGAGAAAGCGGCCAGGAGACAAGCTTCTCAAGTCTTTACAGCGGAGAAGAT
TCCTTGAAGAATTAAGCTTTTTGGTGATTATGGCATTGCCCTTTGTTTTCCAAACTCTGATATGGAACTCTTTAATACAACTTAAGAATCTGCAAATTCTCTTAAGTGCTCAACATGTTTGCCTACAT
TACATTTTACCTTAAAAAAAAATTAAACCTTTAGTGCTTTATTATCTACTAATTGTTTCAATAAAATATTTTCTTTGCACTGAAA

hide sequence

RefSeq Acc Id:

XM_005389114 ⟹ XP_005389171

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955436	1,001 - 28,469 (+)	NCBI

Sequence:

show sequence

CCCTAACGGAAGGCGGGCGAGCGCGCCGCCGGGACCGCGCCTCTTCCGGGCGCGCGGCTGTGGACCTGCTGCCGGGACGGGGGCGGTCCTTGGCGTCTCCGCGGCTTTTCTGGGTGCACTGTGCCGCT
GCGATAGGTGGCGAGCCCGGCTGTAGCCTTCCCGGCGGGGAGAGACGCTCCGCCCCGCACAGTGCTGGCCTGCGGGACGCCCGGCTCTCGGGCGGAGGAGCCGAGCGGAAGGAGGAAGCCGGGCTGGC
GGCGGCCGGCTCTCGGCCGCTACCAATCTTACCATGCTTCCCTGTGATATTTGTGGTGAAATGGTAACCTCAGAATCGGATATGAAGACTCACCTCTTAATTGTTCACATGGAAAATGAAGTTGTATG
TCCATTTTGCAAGTTGTCAGGTGTCAATTATGATGAAATGTGCTTTCACATTGAAACTGCTCATTTTGAGCAGAATACTCTAGAAAGAAACTTTGAGAGGGTGAACCCAATGCAGTATGGAACTTCAG
ATAACAAGGACAGCACTCTGCAGACTACGATGGAAGCTTGTGCATCTAGTCATCCAAAATGTTCAGCTCAAAGCCTTCCTACAGATGGTACTTTAAAACATGAAGTCTTTTATTCAGAGAACTTAACT
GGACCTAGAAAATTCCTGAAAAGTAGGGAAAACCAGTCTGACTTATTTGAAACAAAAGAATCAATTTATGACACAATGTATAGTCCTCCTGAATGTCCATTCTGTGGAAAGATAGAAGAATGTAGTCA
AGATATGGAAAATCATGTGAAAACAAAGCATGTCAGTCTTTTAGACCCACCATTAGAAGACTGTGATCAAGCATTGTATGACTGCCCTATGTGTGGGCTCGTCTGTACAAACTACCATATTCTCCAGG
AACATGTTGACTTGCATTTAGAAGAAAGGAGCTTTCAACAAGGCATGGATAGAATTCAGTGTTCTGCTGATCTAGAATTGGCTCACCAGCTTCAGCAGGAAGAAGATCGGAAGCAATCTGAGGAATCA
AGACAAGAAATGCAGGAATTCCAGCAGCTGCAGCAACAATATGGTTTAGATGGGTCTGGAGGATATAAACAACACCAACTGCGAAATATGGAAATAGAAGTAAATAGAGGAAGAATGCACCCGACTGA
GTTTCACAGGAGAAAAGCTGACCTTATGGAATCCCTAGCTGTTGGTATTGATGATGGAAAAACAAAAACTTCTGGAATTATTGAAGCACTTCATAGATACTATCAGAGTACTGCCACAGATGTGAGGC
GTGTGTGGCTTTCTGCAGTGGTAGATCACTTTCATTCCTCTCTAGGTGACAAAGGTTGGGGTTGTGGTTACAGAAATTTCCAAATGCTACTTTCATCATTATTACAGAATGAGGCTTATGATGATTGC
TTGAAAGGTATGTCAGTTCCTTGTATTCCAAAAATTCAGTCTATGATTGAAGATGCATGGAAAGAAGGTTTTGACCCTCAGGGGGCCTCTCAACTTAATAACAGGTTACAGGGAACAAAAGCCTGGAT
TGGAGCATGTGAAGTATTTACCCTCCTGACTTCCCTGAGGGTCAAGTGCCGTATTGTTGATTTTCACAAGGCAACTGGTCCTTCGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATTACT
CTTCAGAGCAGGAAGGGAATGCAAAGGTAGTATGCACATCCAAACCTCCTATCTATCTCCAGCATCAAGGTCATAGTCGAACAGTTGTTGGAATTGAAGAGAGAAAAAACAGAACATTATGTTTACTA
ATATTTGATCCTGGATGTCCTTCCCGAGAAGTGCAGAAACTGTTAAAACAAGACCTTGAGGCGAGTAGTCTCAAGCAACTTAGGAAATTCGTGGGGAATCTAAAACATAAGCAATACCAGATAGTGGC
AATAGAGGGTGCTCTTTCTCCAGAGGAGAAAGCGGCCAGGAGACAAGCTTCTCAAGTCTTTACAGCGGAGAAGATTCCTTGAAGAATTAAGCTTTTTGGTGATTATGGCATTGCCCTTTGTTTTCCAA
ACTCTGATATGGAACTCTTTAATACAACTTAAGAATCTGCAAATTCTCTTAAGTGCTCAACATGTTTGCCTACATTACATTTTACCTTAAAAAAAAATTAAACCTTTAGTGCTTTATTATCTACTAAT
TGTTTCAATAAAATATTTTCTTTGCACTGAAA

hide sequence


Protein RefSeqs	XP_005389169	(Get FASTA)	NCBI Sequence Viewer
	XP_005389170	(Get FASTA)	NCBI Sequence Viewer
	XP_005389171	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000011434
	ENSCLAP00000011434.1

RefSeq Acc Id:

XP_005389170 ⟸ XM_005389113

- UniProtKB:

A0A8C2V7H1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLPCDICGEMVTSESDMKTHLLIVHMENEVVCPFCKLSGVNYDEMCFHIETAHFEQNTLERNFERVNPMQYGTSDNKDSTLQTTMEACASSHPKCSAQSLPTDGTLKHEVFYSENLTGPRKFLKSREN
QSDLFETKESIYDTMYSPPECPFCGKIEECSQDMENHVKTKHVSLLDPPLEDCDQALYDCPMCGLVCTNYHILQEHVDLHLEERSFQQGMDRIQCSADLELAHQLQQEEDRKQSEESRQEMQEFQQLQ
QQYGLDGSGGYKQHQLRNMEIEVNRGRMHPTEFHRRKADLMESLAVGIDDGKTKTSGIIEALHRYYQSTATDVRRVWLSAVVDHFHSSLGDKGWGCGYRNFQMLLSSLLQNEAYDDCLKGMSVPCIPK
IQSMIEDAWKEGFDPQGASQLNNRLQGTKAWIGACEVFTLLTSLRVKCRIVDFHKATGPSGTHPRLFEWILNYYSSEQEGNAKVVCTSKPPIYLQHQGHSRTVVGIEERKNRTLCLLIFDPGCPSREV
QKLLKQDLEASSLKQLRKFVGNLKHKQYQIVAIEGALSPEEKAARRQASQVFTAEKIP

hide sequence

RefSeq Acc Id:

XP_005389169 ⟸ XM_005389112

- UniProtKB:

A0A8C2V7H1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLPCDICGEMVTSESDMKTHLLIVHMENEVVCPFCKLSGVNYDEMCFHIETAHFEQNTLERNFE
RVNPMQYGTSDNKDSTLQTTMEACASSHPKCSAQSLPTDGTLKHEVFYSENLTGPRKFLKSRENQSDLFETKESIYDTMYSPPECPFCGKIEECSQDMENHVKTKHVSLLDPPLEDCDQALYDCPMCG
LVCTNYHILQEHVDLHLEERSFQQGMDRIQCSADLELAHQLQQEEDRKQSEESRQEMQEFQQLQQQYGLDGSGGYKQHQLRNMEIEVNRGRMHPTEFHRRKADLMESLAVGIDDGKTKTSGIIEALHR
YYQSTATDVRRVWLSAVVDHFHSSLGDKGWGCGYRNFQMLLSSLLQNEAYDDCLKGMSVPCIPKIQSMIEDAWKEGFDPQGASQLNNRLQGTKAWIGACEVFTLLTSLRVKCRIVDFHKATGPSGTHP
RLFEWILNYYSSEQEGNAKVVCTSKPPIYLQHQGHSRTVVGIEERKNRTLCLLIFDPGCPSREVQKLLKQDLEASSLKQLRKFVGNLKHKQYQIVAIEGALSPEEKAARRQASQVFTAEKIP

hide sequence

RefSeq Acc Id:

XP_005389171 ⟸ XM_005389114

- UniProtKB:

A0A8C2V7H1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLPCDICGEMVTSESDMKTHLLIVHMENEVVCPFCKLSGVNYDEMCFHIETAHFEQNTLERNFERVNPMQYGTSDNKDSTLQTTMEACASSHPKCSAQSLPTDGTLKHEVFYSENLTGPRKFLKSREN
QSDLFETKESIYDTMYSPPECPFCGKIEECSQDMENHVKTKHVSLLDPPLEDCDQALYDCPMCGLVCTNYHILQEHVDLHLEERSFQQGMDRIQCSADLELAHQLQQEEDRKQSEESRQEMQEFQQLQ
QQYGLDGSGGYKQHQLRNMEIEVNRGRMHPTEFHRRKADLMESLAVGIDDGKTKTSGIIEALHRYYQSTATDVRRVWLSAVVDHFHSSLGDKGWGCGYRNFQMLLSSLLQNEAYDDCLKGMSVPCIPK
IQSMIEDAWKEGFDPQGASQLNNRLQGTKAWIGACEVFTLLTSLRVKCRIVDFHKATGPSGTHPRLFEWILNYYSSEQEGNAKVVCTSKPPIYLQHQGHSRTVVGIEERKNRTLCLLIFDPGCPSREV
QKLLKQDLEASSLKQLRKFVGNLKHKQYQIVAIEGALSPEEKAARRQASQVFTAEKIP

hide sequence

Ensembl Acc Id:

ENSCLAP00000011434 ⟸ ENSCLAT00000011571

Protein Domains

C2H2-type

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000007886	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000011571	ENTREZGENE
	ENSCLAT00000011571.1	UniProtKB/TrEMBL
Gene3D-CATH	3.90.70.130	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Peptidase_C78_UfSP1/2	UniProtKB/TrEMBL
	Zinc_finger/UBP_domain	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	Zufsp	ENTREZGENE
PANTHER	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER-CONTAINING UBIQUITIN PEPTIDASE 1	UniProtKB/TrEMBL
Pfam	Peptidase_C78	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
UniProt	A0A8C2V7H1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-02-20	Zup1	zinc finger containing ubiquitin peptidase 1	Zufsp	zinc finger with UFM1 specific peptidase domain	Symbol and/or name change	5135510	APPROVED
2016-08-03	Zufsp	zinc finger with UFM1 specific peptidase domain		zinc finger with UFM1-specific peptidase domain	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar