LOC102553636 (uncharacterized LOC102553636) - Rat Genome Database

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Gene: LOC102553636 (uncharacterized LOC102553636) Rattus norvegicus
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Symbol: LOC102553636
Name: uncharacterized LOC102553636
RGD ID: 7702915
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,064,532 - 159,078,821 (-)NCBIGRCr8
mRatBN7.24157,375,080 - 157,391,503 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.04157,091,445 - 157,100,430 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04224,110,004 - 224,118,872 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera4146,118,129 - 146,127,144 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102553636
193 total Variants

1 to 10 of 39 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat

1 to 10 of 39 rows





RefSeq Transcripts XR_346090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_353602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_353602
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84159,064,532 - 159,078,821 (-)NCBI
mRatBN7.24157,375,080 - 157,391,503 (-)NCBI
Rnor_6.04157,091,445 - 157,100,430 (-)NCBI
Rnor_5.04224,110,004 - 224,118,872 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-43105 BioCyc
NCBI Gene LOC102553636 ENTREZGENE
PhenoGen LOC102553636 PhenoGen
RNAcentral URS0000CD087C RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102553636  uncharacterized LOC102553636      Symbol and Name status set to provisional 70820 PROVISIONAL