LOC102549899 (uncharacterized LOC102549899) - Rat Genome Database

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Gene: LOC102549899 (uncharacterized LOC102549899) Rattus norvegicus
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Symbol: LOC102549899
Name: uncharacterized LOC102549899
RGD ID: 7640679
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: LOC102550202; uncharacterized LOC102550202
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8524,232,270 - 24,244,524 (-)NCBIGRCr8
mRatBN7.2519,435,653 - 19,454,889 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0519,417,458 - 19,436,320 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0524,202,336 - 24,220,099 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera518,736,537 - 18,755,399 (-)NCBICelera
Cytogenetic Map5q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102549899
155 total Variants

1 to 10 of 15 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat

1 to 10 of 15 rows






RefSeq Acc Id: XR_005504590
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8524,232,270 - 24,242,735 (-)NCBI
mRatBN7.2519,435,683 - 19,454,888 (-)NCBI
RefSeq Acc Id: XR_010051697
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8524,232,270 - 24,244,524 (-)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-42073 BioCyc
NCBI Gene LOC102549899 ENTREZGENE
PhenoGen LOC102549899 PhenoGen
RNAcentral URS0000CCE19F RNACentral
  URS0000CCE70D RNACentral
  URS0000CCE8A8 RNACentral
  URS0000CCF3E1 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 LOC102549899  uncharacterized LOC102549899  LOC102550202  uncharacterized LOC102550202  Data merged from RGD:7673624 737654 PROVISIONAL
2013-12-18 LOC102549899  uncharacterized LOC102549899      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-12-18 LOC102550202  uncharacterized LOC102550202      Symbol and Name status set to provisional 70820 PROVISIONAL