Csnk1g2 (casein kinase 1, gamma 2) - Rat Genome Database

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Gene: Csnk1g2 (casein kinase 1, gamma 2) Mus musculus
Analyze
Symbol: Csnk1g2
Name: casein kinase 1, gamma 2
RGD ID: 734369
MGI Page MGI
Description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in endocytosis; positive regulation of canonical Wnt signaling pathway; and signal transduction. Predicted to be located in cell cortex. Predicted to be active in cytoplasm; nucleus; and plasma membrane. Is expressed in brain; genitourinary system; and skin. Orthologous to human CSNK1G2 (casein kinase 1 gamma 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2810429I12Rik; AI463719; casein kinase I; casein kinase I isoform gamma-2; CKI-gamma 2; RIKEN cDNA 2810429I12 gene
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,458,465 - 80,476,605 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,458,672 - 80,476,583 (+)EnsemblGRCm39 Ensembl
GRCm381080,622,676 - 80,640,771 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1080,622,838 - 80,640,749 (+)EnsemblGRCm38mm10GRCm38
MGSCv371080,085,525 - 80,103,516 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361080,025,967 - 80,043,870 (+)NCBIMGSCv36mm8
Celera1081,640,604 - 81,658,595 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15077195   PMID:15782199   PMID:15840001   PMID:16141072  
PMID:16141073   PMID:18287559   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24952961   PMID:33206046   PMID:38355793  


Genomics

Comparative Map Data
Csnk1g2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,458,465 - 80,476,605 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,458,672 - 80,476,583 (+)EnsemblGRCm39 Ensembl
GRCm381080,622,676 - 80,640,771 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1080,622,838 - 80,640,749 (+)EnsemblGRCm38mm10GRCm38
MGSCv371080,085,525 - 80,103,516 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361080,025,967 - 80,043,870 (+)NCBIMGSCv36mm8
Celera1081,640,604 - 81,658,595 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
CSNK1G2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38191,941,172 - 1,981,338 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl191,941,172 - 1,981,338 (+)EnsemblGRCh38hg38GRCh38
GRCh37191,941,171 - 1,981,337 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36191,892,161 - 1,932,337 (+)NCBINCBI36Build 36hg18NCBI36
Build 34191,920,718 - 1,932,334NCBI
Celera191,875,252 - 1,915,336 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef191,713,063 - 1,753,602 (+)NCBIHuRef
CHM1_1191,940,768 - 1,980,926 (+)NCBICHM1_1
T2T-CHM13v2.0191,912,501 - 1,953,837 (+)NCBIT2T-CHM13v2.0
Csnk1g2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr879,727,430 - 9,746,341 (-)NCBIGRCr8
mRatBN7.279,076,739 - 9,095,082 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl79,076,740 - 9,095,052 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx711,954,932 - 11,973,278 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0713,830,444 - 13,848,790 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0711,696,523 - 11,714,865 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0711,944,957 - 11,963,268 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,944,958 - 11,963,268 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0712,112,482 - 12,130,793 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,587,247 - 10,620,696 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1710,587,649 - 10,593,409 (-)NCBI
Celera77,259,087 - 7,265,303 (-)NCBICelera
Cytogenetic Map7q11NCBI
Csnk1g2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554956,087,159 - 6,103,412 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554956,087,159 - 6,103,413 (-)NCBIChiLan1.0ChiLan1.0
CSNK1G2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2206,312,024 - 6,357,864 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1195,542,970 - 5,588,268 (+)NCBINHGRI_mPanPan1
PanPan1.1191,959,324 - 1,961,718 (+)NCBIpanpan1.1PanPan1.1panPan2
CSNK1G2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12057,015,019 - 57,042,269 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2057,015,614 - 57,040,694 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2056,809,430 - 56,835,434 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02057,747,258 - 57,773,360 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2057,747,260 - 57,762,467 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12056,804,410 - 56,830,373 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02057,284,242 - 57,310,243 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02057,485,156 - 57,511,202 (-)NCBIUU_Cfam_GSD_1.0
Csnk1g2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118216,686,519 - 216,700,060 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365881,140,619 - 1,147,282 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365881,140,332 - 1,148,265 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CSNK1G2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl276,573,987 - 76,609,384 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1276,573,979 - 76,609,631 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2277,279,223 - 77,303,826 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CSNK1G2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.161,743,018 - 1,781,844 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl61,743,061 - 1,783,406 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660816,988,618 - 7,045,396 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Csnk1g2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248286,833,114 - 6,839,914 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248286,832,157 - 6,859,244 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Csnk1g2
396 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:410
Count of miRNA genes:175
Interacting mature miRNAs:186
Transcripts:ENSMUST00000079773, ENSMUST00000085435
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106684818792258673Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75338568109338767Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073506901107507047Mouse
4142107Obrq12_mobesity resistance QTL 12 (mouse)Not determined7398721682491121Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106549093899491121Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078381268112381268Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106549093899491121Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067335830111735905Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075338568109338767Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
1301737Insq9_minsulin QTL 9 (mouse)Not determined106549093899491121Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075338568109338767Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse

Markers in Region
AI463719  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381080,640,319 - 80,640,493UniSTSGRCm38
MGSCv371080,103,064 - 80,103,238UniSTSGRCm37
Celera1081,658,143 - 81,658,317UniSTS
Cytogenetic Map10C1UniSTS
Whitehead/MRC_RH10913.35UniSTS
Csnk1g2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381080,640,069 - 80,640,684UniSTSGRCm38
Celera1081,657,893 - 81,658,508UniSTS
Cytogenetic Map10C1UniSTS
cM Map1039.72UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_134002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001779401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003948572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_380333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC152058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC152410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC128313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF612914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000079773   ⟹   ENSMUSP00000078706
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,458,672 - 80,476,575 (+)Ensembl
GRCm38.p6 Ensembl1080,622,838 - 80,640,741 (+)Ensembl
Ensembl Acc Id: ENSMUST00000085435   ⟹   ENSMUSP00000082560
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,465,490 - 80,476,171 (+)Ensembl
GRCm38.p6 Ensembl1080,629,656 - 80,640,337 (+)Ensembl
Ensembl Acc Id: ENSMUST00000217902
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,471,999 - 80,476,583 (+)Ensembl
GRCm38.p6 Ensembl1080,636,165 - 80,640,749 (+)Ensembl
Ensembl Acc Id: ENSMUST00000218093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,474,104 - 80,474,785 (+)Ensembl
GRCm38.p6 Ensembl1080,638,270 - 80,638,951 (+)Ensembl
Ensembl Acc Id: ENSMUST00000219814
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,470,229 - 80,474,112 (+)Ensembl
GRCm38.p6 Ensembl1080,634,395 - 80,638,278 (+)Ensembl
Ensembl Acc Id: ENSMUST00000220025
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,475,230 - 80,476,104 (+)Ensembl
GRCm38.p6 Ensembl1080,639,396 - 80,640,270 (+)Ensembl
Ensembl Acc Id: ENSMUST00000220163   ⟹   ENSMUSP00000151911
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,474,995 - 80,475,988 (+)Ensembl
GRCm38.p6 Ensembl1080,639,161 - 80,640,154 (+)Ensembl
Ensembl Acc Id: ENSMUST00000220431
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,475,473 - 80,476,092 (+)Ensembl
GRCm38.p6 Ensembl1080,639,639 - 80,640,258 (+)Ensembl
RefSeq Acc Id: NM_001159591   ⟹   NP_001153063
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,465,490 - 80,476,605 (+)NCBI
GRCm381080,629,656 - 80,640,771 (+)NCBI
MGSCv371080,085,525 - 80,103,516 (+)RGD
Celera1081,640,604 - 81,658,595 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_134002   ⟹   NP_598763
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,458,614 - 80,476,605 (+)NCBI
GRCm381080,622,780 - 80,640,771 (+)NCBI
MGSCv371080,085,525 - 80,103,516 (+)RGD
Celera1081,640,604 - 81,658,595 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006513011   ⟹   XP_006513074
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,458,465 - 80,476,580 (+)NCBI
GRCm381080,622,676 - 80,640,749 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001779401
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,458,548 - 80,476,577 (+)NCBI
GRCm381080,622,705 - 80,640,746 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003948572
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,465,512 - 80,476,580 (+)NCBI
GRCm381080,629,679 - 80,640,746 (+)NCBI
Sequence:
RefSeq Acc Id: XR_380333
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,458,693 - 80,476,577 (+)NCBI
GRCm381080,622,859 - 80,640,744 (+)NCBI
Sequence:
RefSeq Acc Id: NP_598763   ⟸   NM_134002
- Peptide Label: isoform 1
- UniProtKB: Q99K78 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153063   ⟸   NM_001159591
- Peptide Label: isoform 2
- UniProtKB: Q8BVP5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006513074   ⟸   XM_006513011
- Peptide Label: isoform X1
- UniProtKB: Q8BVP5 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000078706   ⟸   ENSMUST00000079773
Ensembl Acc Id: ENSMUSP00000082560   ⟸   ENSMUST00000085435
Ensembl Acc Id: ENSMUSP00000151911   ⟸   ENSMUST00000220163
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BVP5-F1-model_v2 AlphaFold Q8BVP5 1-415 view protein structure

Promoters
RGD ID:6819138
Promoter ID:MM_KWN:4894
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000019676,   ENSMUST00000085435,   NM_134002
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,084,676 - 80,085,787 (+)MPROMDB
RGD ID:6819139
Promoter ID:MM_KWN:4895
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:NM_001159591
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,091,681 - 80,092,181 (+)MPROMDB
RGD ID:6846710
Promoter ID:MM_ACW:5379
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:CSNK1G2.ESEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,097,026 - 80,097,526 (+)MPROMDB
RGD ID:6846714
Promoter ID:MM_ACW:5382
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Spleen
Transcripts:CSNK1G2.GSEP07,   CSNK1G2.HSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,101,066 - 80,101,566 (+)MPROMDB
RGD ID:6846712
Promoter ID:MM_ACW:5381
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:CSNK1G2.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,101,121 - 80,101,621 (+)MPROMDB
RGD ID:8672686
Promoter ID:EPDNEW_M14374
Type:initiation region
Name:Csnk1g2_1
Description:Mus musculus casein kinase 1, gamma 2 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14375  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381080,622,718 - 80,622,778EPDNEW
RGD ID:8672688
Promoter ID:EPDNEW_M14375
Type:multiple initiation site
Name:Csnk1g2_2
Description:Mus musculus casein kinase 1, gamma 2 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14374  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381080,629,677 - 80,629,737EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1920014 AgrOrtholog
Ensembl Genes ENSMUSG00000003345 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000079773 ENTREZGENE
  ENSMUST00000079773.14 UniProtKB/TrEMBL
  ENSMUST00000085435 ENTREZGENE
  ENSMUST00000085435.7 UniProtKB/Swiss-Prot
  ENSMUST00000220163.2 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Casein_kinase-1_gamma_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CK1_Ser-Thr_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:103236 UniProtKB/Swiss-Prot
MGD MGI:1920014 ENTREZGENE
NCBI Gene Csnk1g2 ENTREZGENE
PANTHER CASEIN KINASE I ISOFORM GAMMA-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CASEIN KINASE-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CK1gamma_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Csnk1g2 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1W2P817_MOUSE UniProtKB/TrEMBL
  KC1G2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q99JQ5_MOUSE UniProtKB/TrEMBL
  Q99K78 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Csnk1g2  casein kinase 1, gamma 2  2810429I12Rik  RIKEN cDNA 2810429I12 gene  Symbol and/or name change 5135510 APPROVED
2024-08-21 2810429I12Rik  RIKEN cDNA 2810429I12 gene  Csnk1g2  casein kinase 1, gamma 2  Symbol and/or name change 5135510 APPROVED