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Gene: Il20rb (interleukin 20 receptor subunit beta) Rattus rattus

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Symbol:

Il20rb

Name:

interleukin 20 receptor subunit beta

RGD ID:

626048292

Description:

ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-20 binding (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); immune response-inhibiting signal transduction (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); toxic shock syndrome (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

interleukin-20 receptor subunit beta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Rrattus_CSIRO_v1 - Rrattus_CSIRO_v1 Assembly

Position:

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	91,756,521 - 91,787,106 (-)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

ovarian cancer (ISO)

Thyroid Carcinoma, Nonmedullary 1 (ISO)

toxic shock syndrome (ISO)

urinary bladder cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

homeostasis of number of cells within a tissue (ISO)

immune response-inhibiting signal transduction (ISO)

inflammatory response to antigenic stimulus (ISO)

interleukin-19-mediated signaling pathway (ISO)

negative regulation of interleukin-2 production (ISO)

negative regulation of T cell proliferation (ISO)

negative regulation of type II interferon production (ISO)

negative regulation of type IV hypersensitivity (ISO)

positive regulation of interleukin-10 production (ISO)

positive regulation of interleukin-4 production (ISO)

regulation of T cell activation (ISO)

Cellular Component

interleukin-20 receptor complex (ISO)

signaling receptor complex (ISO)

Molecular Function

cytokine receptor activity (ISO)

interleukin-20 binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Il20rb
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	91,756,521 - 91,787,106 (-)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

IL20RB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	136,957,983 - 137,011,085 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	136,946,230 - 137,011,085 (+)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	3	136,676,825 - 136,729,927 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	138,159,397 - 138,212,610 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	3	135,102,983 - 135,156,200 (+)	NCBI		Celera
Cytogenetic Map	3	q22.3	NCBI
HuRef	3	134,052,492 - 134,105,781 (+)	NCBI		HuRef
CHM1_1	3	136,640,346 - 136,693,509 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	139,698,644 - 139,751,732 (+)	NCBI		T2T-CHM13v2.0

Il20rb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	100,339,772 - 100,368,526 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	100,338,496 - 100,368,841 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	100,457,719 - 100,486,473 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	100,457,719 - 100,486,788 (-)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	9	100,358,138 - 100,386,892 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	100,267,073 - 100,295,737 (-)	NCBI		MGSCv36	mm8
Celera	9	99,996,528 - 100,025,243 (-)	NCBI		Celera
Cytogenetic Map	9	E3.3	NCBI
cM Map	9	52.66	NCBI

Il20rb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	109,858,108 - 109,896,066 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	109,854,012 - 109,889,363 (-)	Ensembl				GRCr8
mRatBN7.2	8	100,979,085 - 101,010,829 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	100,980,383 - 101,009,942 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	106,651,028 - 106,680,558 (-)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	104,850,343 - 104,879,875 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	102,692,883 - 102,722,416 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	8	110,772,856 - 110,802,455 (-)	NCBI
Lyon_Normotensive	8	112,877,651 - 112,907,250 (-)	NCBI
Lyon_Hypertensive	8	111,366,909 - 111,396,506 (-)	NCBI
F344_StmMcwi	8	102,776,754 - 102,806,352 (-)	NCBI
Rnor_6.0	8	108,745,906 - 108,778,561 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	108,747,204 - 108,777,717 (-)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	8	108,165,070 - 108,194,857 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	105,305,597 - 105,337,224 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	100,377,810 - 100,407,239 (-)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

Il20rb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955501	1,826,687 - 1,863,261 (-)	NCBI	ChiLan1.0	ChiLan1.0

IL20RB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	134,875,083 - 134,922,138 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	134,879,969 - 134,926,871 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	133,995,863 - 134,045,206 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	141,457,692 - 141,504,744 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	141,474,161 - 141,504,744 (+)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

IL20RB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	33,384,057 - 33,421,619 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	33,384,486 - 33,420,016 (+)	Ensembl		CanFam3.1 Ensembl	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	33,368,707 - 33,406,006 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	33,914,041 - 33,951,404 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	33,914,195 - 33,950,582 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	33,596,433 - 33,633,821 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	33,661,858 - 33,699,150 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	33,906,877 - 33,944,149 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Il20rb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	3	83,817,868 - 83,858,122 (+)	NCBI		mIctTri1.hap1

IL20RB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	77,952,336 - 77,986,155 (+)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	13	77,946,356 - 77,986,158 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	85,591,946 - 85,626,043 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IL20RB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	15	53,971,716 - 54,018,760 (-)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666041	26,489,282 - 26,536,106 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	15	53,446,410 - 53,493,827 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	53,448,034 - 53,493,618 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

Il20rb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624730	13,371,898 - 13,408,927 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624730	13,378,478 - 13,409,676 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl	8	33,829,613 - 33,861,314 (-)	Ensembl

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_032911323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAAIVD010000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_032911323 ⟹ XP_032767214

Type:

CODING

Position:

Black Rat Assembly	Chr	Position (strand)	Source
Rrattus_CSIRO_v1	8	91,756,521 - 91,787,106 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_032767214	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_032767214 ⟸ XM_032911323

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	Il20rb	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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