Pccb (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 110,470,197 - 110,520,222 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 101,591,218 - 101,641,213 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 101,590,737 - 101,641,234 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 107,253,215 - 107,303,289 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 105,452,530 - 105,502,604 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 103,295,053 - 103,345,127 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 109,368,887 - 109,418,871 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 109,368,624 - 109,418,872 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 108,785,668 - 108,836,131 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 105,946,482 - 105,996,472 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 105,965,673 - 106,015,928 (-) | NCBI | | | | | Celera | 8 | 100,982,344 - 101,032,252 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q31 | NCBI | | | | |
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PCCB (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 136,250,340 - 136,330,169 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 136,250,340 - 136,337,896 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 135,969,182 - 136,049,011 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 137,451,857 - 137,531,701 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 137,451,845 - 137,531,703 | NCBI | | | | | Celera | 3 | 134,394,227 - 134,474,215 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q22.3 | NCBI | | | | | HuRef | 3 | 133,346,299 - 133,425,999 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 135,932,709 - 136,012,564 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 138,996,153 - 139,070,827 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pccb (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 100,864,085 - 100,916,993 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 100,864,085 - 100,916,951 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 100,982,032 - 101,034,940 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 100,982,032 - 101,034,898 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 100,882,457 - 100,935,294 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 100,791,390 - 100,844,227 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 100,520,833 - 100,575,235 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | E4 | NCBI | | | | | cM Map | 9 | 53.09 | NCBI | | | | |
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Pccb (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955501 | 2,474,330 - 2,563,837 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955501 | 2,474,330 - 2,563,107 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PCCB (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 134,181,366 - 134,259,516 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 134,186,097 - 134,264,246 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 133,304,472 - 133,382,664 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 140,768,319 - 140,845,972 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 140,768,319 - 140,849,270 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PCCB (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 23 | 32,689,732 - 32,782,204 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 32,687,839 - 32,836,366 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 32,674,600 - 32,767,066 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 33,218,542 - 33,311,304 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 33,218,274 - 33,331,089 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 32,901,613 - 32,994,062 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 32,968,904 - 33,061,334 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 33,212,801 - 33,305,014 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pccb (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 72,346,028 - 72,405,814 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936529 | 9,106,496 - 9,176,394 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936529 | 9,106,525 - 9,166,311 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PCCB (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 77,217,428 - 77,316,568 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 77,217,481 - 77,314,779 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 84,587,489 - 84,684,642 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PCCB (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 15 | 54,110,014 - 54,198,405 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 54,108,389 - 54,198,329 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 27,159,277 - 27,253,677 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pccb (Heterocephalus glaber - naked mole-rat) |
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