Supt4h1-ps2 (SPT4 homolog, DSIF elongation factor subunit, pseudogene 2) - Rat Genome Database

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Gene: Supt4h1-ps2 (SPT4 homolog, DSIF elongation factor subunit, pseudogene 2) Rattus norvegicus
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Symbol: Supt4h1-ps2
Name: SPT4 homolog, DSIF elongation factor subunit, pseudogene 2
RGD ID: 2319013
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical LOC100365467; LOC100365467
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8465,062,094 - 65,063,141 (+)NCBIGRCr8
mRatBN7.2464,094,662 - 64,097,040 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0462,948,673 - 62,950,357 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0462,670,700 - 62,671,376 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera459,141,960 - 59,143,676 (+)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Supt4h1-ps2
23 total Variants

1 to 10 of 54 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711470578881294Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)43950527573892441Rat

1 to 10 of 54 rows
D4Rat119  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8465,060,960 - 65,061,193 (+)Marker Load Pipeline
Rnor_6.0462,947,687 - 62,947,927NCBIRnor6.0
RGSC_v3.4462,832,009 - 62,832,241UniSTSRGSC3.4
RGSC_v3.4462,832,008 - 62,832,241RGDRGSC3.4
RGSC_v3.1463,108,139 - 63,108,371RGD
Celera459,141,073 - 59,141,305UniSTS
RH 3.4 Map4371.7RGD
RH 3.4 Map4371.7UniSTS
SHRSP x BN Map432.92UniSTS
SHRSP x BN Map432.92RGD






GenBank Nucleotide JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-45242 BioCyc
NCBI Gene 100365467 ENTREZGENE
PhenoGen Supt4h1-ps2 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Supt4h1-ps2  SPT4 homolog, DSIF elongation factor subunit, pseudogene 2  LOC100365467  hypothetical LOC100365467  Symbol and Name Changed 1299863 APPROVED
2010-05-05 LOC100365467  hypothetical LOC100365467      Symbol and Name status set to provisional 70820 PROVISIONAL