Diaph2 (diaphanous related formin 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Diaph2 (diaphanous related formin 2) Heterocephalus glaber
Analyze
Symbol: Diaph2
Name: diaphanous related formin 2
RGD ID: 18936428
Description: ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); axon midline choice point recognition (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); FOUND IN endoplasmic reticulum (ortholog); intracellular membrane-bounded organelle (ortholog); nucleolus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: diaphanous-like protein 2; protein diaphanous homolog 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248513,291,888 - 4,329,285 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Diaph2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248513,291,888 - 4,329,285 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
DIAPH2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X96,684,842 - 97,604,997 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX96,684,712 - 97,604,997 (+)EnsemblGRCh38hg38GRCh38
GRCh37X95,939,841 - 96,859,996 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X95,826,365 - 96,746,652 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X95,745,855 - 96,666,137NCBI
CeleraX96,458,012 - 97,373,277 (+)NCBICelera
Cytogenetic MapXq21.33NCBI
HuRefX85,739,952 - 86,659,936 (+)NCBIHuRef
CHM1_1X95,832,371 - 96,748,951 (+)NCBICHM1_1
T2T-CHM13v2.0X95,124,162 - 96,044,467 (+)NCBIT2T-CHM13v2.0
Diaph2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X128,650,409 - 129,366,583 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX128,650,491 - 129,366,583 (+)EnsemblGRCm39 Ensembl
GRCm38X129,749,668 - 130,465,834 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX129,749,742 - 130,465,834 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X126,284,278 - 126,995,733 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X125,096,143 - 125,675,204 (+)NCBIMGSCv36mm8
CeleraX112,642,958 - 113,350,873 (+)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX52.36NCBI
Diaph2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X96,700,535 - 97,528,080 (+)NCBIGRCr8
mRatBN7.2X92,395,189 - 93,234,521 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX92,395,251 - 93,229,869 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X99,722,910 - 100,363,228 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX99,852,198 - 100,057,439 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0X99,553,986 - 100,197,417 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X116,641,770 - 117,258,314 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX93,552,263 - 94,180,770 (+)NCBICelera
Cytogenetic MapXq31NCBI
Diaph2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555032,325,103 - 2,835,656 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555032,324,934 - 3,132,466 (+)NCBIChiLan1.0ChiLan1.0
DIAPH2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X96,304,030 - 97,225,531 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X96,307,680 - 97,224,783 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X85,916,356 - 86,837,858 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X96,067,252 - 96,979,830 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX96,066,870 - 96,979,462 (+)Ensemblpanpan1.1panPan2
DIAPH2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X69,994,674 - 71,044,178 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX69,994,650 - 71,043,198 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX60,804,704 - 61,857,429 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X71,343,583 - 72,392,960 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X69,016,716 - 70,066,386 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X70,624,006 - 71,673,290 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X70,255,069 - 71,304,928 (+)NCBIUU_Cfam_GSD_1.0
Diaph2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X66,474,564 - 67,266,088 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365842,287,288 - 3,076,788 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365842,286,919 - 3,081,652 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIAPH2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX78,602,390 - 79,520,428 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X78,602,385 - 79,520,441 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X85,891,093 - 85,978,699 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DIAPH2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X85,130,928 - 86,035,944 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606510,174,929 - 10,906,218 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021247646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021247647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021247648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01090157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01090233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH166522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_021247646   ⟹   XP_021103305
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248513,291,888 - 4,329,285 (+)NCBI
RefSeq Acc Id: XM_021247647   ⟹   XP_021103306
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248513,291,888 - 4,329,285 (+)NCBI
RefSeq Acc Id: XM_021247648   ⟹   XP_021103307
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248513,291,888 - 4,329,285 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021103305 (Get FASTA)   NCBI Sequence Viewer  
  XP_021103306 (Get FASTA)   NCBI Sequence Viewer  
  XP_021103307 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHA99507 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021103305   ⟸   XM_021247646
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021103306   ⟸   XM_021247647
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021103307   ⟸   XM_021247648
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
NCBI Gene Diaph2 ENTREZGENE