Kyat3 (kynurenine aminotransferase 3) - Rat Genome Database

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Gene: Kyat3 (kynurenine aminotransferase 3) Heterocephalus glaber
Analyze
Symbol: Kyat3
Name: kynurenine aminotransferase 3
RGD ID: 18935345
Description: ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); amino acid metabolic process (ortholog); kynurenine metabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; FOUND IN cytoplasm (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CCBL2; kynurenine--oxoglutarate transaminase 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247428,599,862 - 8,659,110 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
mitochondrion  (IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kyat3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247428,599,862 - 8,659,110 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
KYAT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38188,921,044 - 88,992,960 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl188,935,773 - 88,992,953 (-)EnsemblGRCh38hg38GRCh38
GRCh37189,386,727 - 89,458,643 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36189,174,044 - 89,231,104 (-)NCBINCBI36Build 36hg18NCBI36
Celera187,647,258 - 87,704,434 (-)NCBICelera
Cytogenetic Map1p22.2NCBI
HuRef187,518,867 - 87,576,019 (-)NCBIHuRef
CHM1_1189,516,514 - 89,573,685 (-)NCBICHM1_1
T2T-CHM13v2.0188,764,436 - 88,836,357 (-)NCBIT2T-CHM13v2.0
Kyat3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393142,406,780 - 142,450,672 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3142,406,812 - 142,452,631 (+)EnsemblGRCm39 Ensembl
GRCm383142,701,019 - 142,744,911 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3142,701,051 - 142,746,870 (+)EnsemblGRCm38mm10GRCm38
MGSCv373142,364,044 - 142,407,874 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363142,638,466 - 142,682,296 (+)NCBIMGSCv36mm8
Celera3149,133,370 - 149,177,239 (+)NCBICelera
Cytogenetic Map3H1NCBI
cM Map366.69NCBI
Kyat3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82234,362,306 - 234,407,646 (+)NCBIGRCr8
mRatBN7.22231,701,881 - 231,747,462 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2231,701,963 - 231,747,227 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2239,481,372 - 239,526,444 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02237,375,666 - 237,420,734 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02232,239,045 - 232,284,099 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02248,644,473 - 248,690,289 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2248,649,441 - 248,690,089 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02267,169,695 - 267,220,549 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42240,849,349 - 240,857,337 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12240,829,675 - 240,844,071 (+)NCBI
Celera2223,713,699 - 223,757,924 (+)NCBICelera
Cytogenetic Map2q44NCBI
Kyat3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554235,344,562 - 5,391,518 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554235,340,863 - 5,388,460 (+)NCBIChiLan1.0ChiLan1.0
KYAT3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21137,971,448 - 138,049,428 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11137,132,877 - 137,205,094 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0191,636,681 - 91,708,859 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1190,403,072 - 90,460,426 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl190,403,072 - 90,460,426 (-)Ensemblpanpan1.1panPan2
KYAT3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1659,409,715 - 59,473,238 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl659,416,191 - 59,473,232 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha662,118,320 - 62,181,537 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0659,920,984 - 59,984,529 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl659,921,026 - 59,984,531 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1659,486,769 - 59,550,195 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0659,441,849 - 59,505,435 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0659,927,659 - 59,991,112 (+)NCBIUU_Cfam_GSD_1.0
Kyat3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505899,313,496 - 99,361,813 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493673277,427 - 125,816 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KYAT3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4127,451,516 - 127,507,759 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14127,451,475 - 127,507,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24139,676,619 - 139,732,902 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KYAT3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12044,416,179 - 44,488,388 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2044,419,712 - 44,488,491 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603373,428,283 - 73,491,315 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_013070898   ⟹   XP_012926352
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,599,862 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_013070899   ⟹   XP_012926353
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,600,105 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_013070905   ⟹   XP_012926359
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,605,748 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_013070907   ⟹   XP_012926361
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,599,862 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_013070909   ⟹   XP_012926363
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,599,862 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_021255419   ⟹   XP_021111078
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,605,748 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_021255420   ⟹   XP_021111079
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,605,748 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_021255421   ⟹   XP_021111080
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,602,452 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_021255422   ⟹   XP_021111081
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,605,748 - 8,659,110 (+)NCBI
RefSeq Acc Id: XM_021255423   ⟹   XP_021111082
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,605,748 - 8,659,110 (+)NCBI
RefSeq Acc Id: XP_012926352   ⟸   XM_013070898
- Peptide Label: isoform X1
- UniProtKB: A0AAX6QUU3 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012926361   ⟸   XM_013070907
- Peptide Label: isoform X4
- UniProtKB: A0AAX6QVJ0 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012926363   ⟸   XM_013070909
- Peptide Label: isoform X4
- UniProtKB: A0AAX6QVJ0 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012926353   ⟸   XM_013070899
- Peptide Label: isoform X1
- UniProtKB: A0AAX6QUU3 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021111080   ⟸   XM_021255421
- Peptide Label: isoform X4
- UniProtKB: A0AAX6QVJ0 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012926359   ⟸   XM_013070905
- Peptide Label: isoform X4
- UniProtKB: A0AAX6QVJ0 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021111078   ⟸   XM_021255419
- Peptide Label: isoform X2
- UniProtKB: A0AAX6SR09 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021111079   ⟸   XM_021255420
- Peptide Label: isoform X3
- UniProtKB: A0AAX6SQI2 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021111081   ⟸   XM_021255422
- Peptide Label: isoform X5
- UniProtKB: A0A0P6JVN5 (UniProtKB/TrEMBL),   G5BGF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021111082   ⟸   XM_021255423
- Peptide Label: isoform X6
- UniProtKB: A0AAX6SSX1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH 3.40.640.10 UniProtKB/TrEMBL
  3.90.1150.10 UniProtKB/TrEMBL
InterPro Aminotransferase_I/II UniProtKB/TrEMBL
  Kynurenine-oxoglutarate_AT UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_major UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_small UniProtKB/TrEMBL
KEGG Report hgl:101701445 UniProtKB/TrEMBL
NCBI Gene Kyat3 ENTREZGENE
PANTHER FI04487P UniProtKB/TrEMBL
  PTHR43807:SF6 UniProtKB/TrEMBL
Pfam Aminotran_1_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53383 UniProtKB/TrEMBL
UniProt A0A0P6JVN5 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6QUU3 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6QVJ0 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SQI2 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SR09 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6SSX1 ENTREZGENE, UniProtKB/TrEMBL
  G5BGF8 ENTREZGENE, UniProtKB/TrEMBL