Symbol:
Vps37d
Name:
VPS37D subunit of ESCRT-I
RGD ID:
18934521
Description:
INVOLVED IN catabolic process (inferred); protein targeting to membrane (inferred); protein targeting to vacuole (inferred); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); basal cell carcinoma (ortholog); FOUND IN endosome (inferred); ESCRT I complex (inferred); late endosome membrane (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
vacuolar protein sorting-associated protein 37D; VPS37D, ESCRT-I subunit
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Vps37d
VPS37D Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 73,665,347 - 73,672,110 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 73,667,831 - 73,672,112 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 73,082,161 - 73,086,440 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 72,720,110 - 72,724,376 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 7 68,560,386 - 68,564,652 (+) NCBI Celera Cytogenetic Map 7 q11.23 NCBI HuRef 7 68,964,585 - 68,968,851 (+) NCBI HuRef CHM1_1 7 73,227,882 - 73,232,148 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 74,866,261 - 74,873,025 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 72,415,246 - 72,419,512 (+) NCBI
Vps37d Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 135,101,751 - 135,107,197 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 135,101,754 - 135,107,120 (-) Ensembl GRCm39 Ensembl GRCm38 5 135,072,899 - 135,078,326 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 135,072,900 - 135,078,266 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 135,548,771 - 135,554,136 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 135,357,528 - 135,362,893 (-) NCBI MGSCv36 mm8 Celera 5 132,083,230 - 132,088,596 (-) NCBI Celera Cytogenetic Map 5 G2 NCBI cM Map 5 74.98 NCBI
Vps37d Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 27,245,755 - 27,251,214 (+) NCBI GRCr8 mRatBN7.2 12 21,609,210 - 21,614,669 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 21,609,182 - 21,614,659 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 22,751,393 - 22,756,872 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 23,363,710 - 23,369,189 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 22,430,392 - 22,435,893 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 24,651,342 - 24,656,793 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 24,651,314 - 24,656,793 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 26,650,992 - 26,656,900 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Celera 12 23,372,828 - 23,378,264 (+) NCBI Celera Cytogenetic Map 12 q12 NCBI
Vps37d Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955456 14,064,197 - 14,067,571 (-) NCBI ChiLan1.0 ChiLan1.0
VPS37D Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 91,229,744 - 91,234,098 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 139,494,375 - 139,498,731 (-) NCBI NHGRI_mPanPan1 PanPan1.1 7 80,798,226 - 80,824,883 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 80,798,226 - 80,824,883 (+) Ensembl panpan1.1 panPan2
VPS37D Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 6,602,905 - 6,606,781 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 6,603,627 - 6,607,029 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 8,300,297 - 8,304,136 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 6,417,931 - 6,421,771 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 6,417,934 - 6,421,783 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 6,407,426 - 6,411,265 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 6,355,166 - 6,359,002 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 6,518,879 - 6,522,719 (-) NCBI UU_Cfam_GSD_1.0
Vps37d Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409344 131,145,659 - 131,148,853 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936543 2,887,708 - 2,890,946 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936543 2,887,723 - 2,890,907 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
VPS37D Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 10,947,403 - 10,951,273 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 10,947,403 - 10,951,271 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 10,645,945 - 10,649,803 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
VPS37D Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 28 9,393,163 - 9,398,387 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 28 9,393,354 - 9,398,378 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666070 7,104,401 - 7,108,754 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSHGLT00000026785 ⟹ ENSHGLP00000026549
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624740 14,136,775 - 14,142,569 (-) Ensembl
Ensembl Acc Id:
ENSHGLT00000026786 ⟹ ENSHGLP00000026550
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624740 14,139,219 - 14,142,182 (-) Ensembl
RefSeq Acc Id:
XM_004840065 ⟹ XP_004840122
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624740 14,137,087 - 14,142,211 (-) NCBI
RefSeq Acc Id:
XP_004840122 ⟸ XM_004840065
- UniProtKB:
A0AAX6NZ60 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSHGLP00000026550 ⟸ ENSHGLT00000026786
Ensembl Acc Id:
ENSHGLP00000026549 ⟸ ENSHGLT00000026785
