Gnpnat1 (glucosamine-phosphate N-acetyltransferase 1) - Rat Genome Database

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Gene: Gnpnat1 (glucosamine-phosphate N-acetyltransferase 1) Heterocephalus glaber
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Symbol: Gnpnat1
Name: glucosamine-phosphate N-acetyltransferase 1
RGD ID: 18933750
Description: ENCODES a protein that exhibits glucosamine 6-phosphate N-acetyltransferase activity (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glucosamine metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); RHIZOMELIC DYSPLASIA, AIN-NAZ TYPE (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); late endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glucosamine 6-phosphate N-acetyltransferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,334,344 - 16,346,107 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,334,347 - 16,346,107 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Gnpnat1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,334,344 - 16,346,107 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,334,347 - 16,346,107 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GNPNAT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,775,193 - 52,791,607 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1452,775,193 - 52,791,668 (-)EnsemblGRCh38hg38GRCh38
GRCh371453,241,911 - 53,258,325 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361452,311,661 - 52,328,133 (-)NCBINCBI36Build 36hg18NCBI36
Build 341452,311,661 - 52,328,133NCBI
Celera1433,291,588 - 33,308,063 (-)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1433,402,899 - 33,420,411 (-)NCBIHuRef
CHM1_11453,180,808 - 53,197,284 (-)NCBICHM1_1
T2T-CHM13v2.01446,982,987 - 46,999,449 (-)NCBIT2T-CHM13v2.0
Gnpnat1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,613,897 - 45,626,972 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,613,791 - 45,642,370 (-)EnsemblGRCm39 Ensembl
GRCm381445,376,421 - 45,388,987 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,376,334 - 45,404,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv371445,996,096 - 46,008,471 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361444,298,298 - 44,310,673 (-)NCBIMGSCv36mm8
Celera1441,556,350 - 41,568,784 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.92NCBI
Gnpnat1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81521,076,129 - 21,088,526 (-)NCBIGRCr8
mRatBN7.21518,596,180 - 18,608,854 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,596,442 - 18,608,739 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,391,243 - 21,403,537 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,348,201 - 22,360,495 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,604,775 - 20,617,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,721,292 - 19,734,032 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,721,293 - 19,733,967 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,685,448 - 23,698,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,272,165 - 21,284,459 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1519,024,815 - 19,037,109 (-)NCBICelera
Cytogenetic Map15p14NCBI
Gnpnat1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,406,723 - 10,424,431 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,406,248 - 10,424,431 (+)NCBIChiLan1.0ChiLan1.0
GNPNAT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21553,906,123 - 53,922,628 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11453,122,633 - 53,139,135 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01433,371,603 - 33,388,098 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11451,655,182 - 51,671,617 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,655,182 - 51,671,619 (-)Ensemblpanpan1.1panPan2
GNPNAT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1828,992,173 - 29,005,511 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl828,993,227 - 29,005,435 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha828,736,462 - 28,749,813 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0829,158,602 - 29,171,970 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl829,158,609 - 29,171,982 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1828,832,502 - 28,845,853 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0828,904,894 - 28,918,244 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0829,233,507 - 29,247,101 (-)NCBIUU_Cfam_GSD_1.0
Gnpnat1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,301,693 - 76,312,369 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366972,079,470 - 2,086,877 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366972,079,396 - 2,087,602 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNPNAT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,407,229 - 182,423,441 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,404,460 - 182,423,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,680,394 - 202,694,010 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GNPNAT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,862,903 - 29,878,050 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,863,956 - 29,878,135 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605318,134,030 - 18,149,747 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000020652   ⟹   ENSHGLP00000020450
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473116,334,344 - 16,346,107 (+)Ensembl
RefSeq Acc Id: XM_004835526   ⟹   XP_004835583
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,334,347 - 16,346,107 (+)NCBI
RefSeq Acc Id: XM_004835527   ⟹   XP_004835584
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,334,347 - 16,346,107 (+)NCBI
RefSeq Acc Id: XM_004835528   ⟹   XP_004835585
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,334,702 - 16,346,107 (+)NCBI
RefSeq Acc Id: XM_021262221   ⟹   XP_021117880
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,334,543 - 16,346,107 (+)NCBI
RefSeq Acc Id: XM_021262225   ⟹   XP_021117884
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,334,965 - 16,346,107 (+)NCBI
RefSeq Acc Id: XP_004835583   ⟸   XM_004835526
- UniProtKB: A0A0P6J7F0 (UniProtKB/TrEMBL),   G5AXX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004835584   ⟸   XM_004835527
- UniProtKB: A0A0P6J7F0 (UniProtKB/TrEMBL),   G5AXX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021117880   ⟸   XM_021262221
- UniProtKB: A0A0P6J7F0 (UniProtKB/TrEMBL),   G5AXX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004835585   ⟸   XM_004835528
- UniProtKB: A0A0P6J7F0 (UniProtKB/TrEMBL),   G5AXX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021117884   ⟸   XM_021262225
- UniProtKB: A0A0P6J7F0 (UniProtKB/TrEMBL),   G5AXX5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000020450   ⟸   ENSHGLT00000020652


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014618 Ensembl, ENTREZGENE
  ENSHGLG00100001948 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000020652 ENTREZGENE
  ENSHGLT00100002555 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
  GNPNAT1 UniProtKB/TrEMBL
KEGG Report hgl:101715482 UniProtKB/TrEMBL
NCBI Gene Gnpnat1 ENTREZGENE
PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE UniProtKB/TrEMBL
  PTHR13355 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A0P6J7F0 ENTREZGENE, UniProtKB/TrEMBL
  G5AXX5 ENTREZGENE, UniProtKB/TrEMBL