Fcrlb (Fc receptor like B) - Rat Genome Database

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Gene: Fcrlb (Fc receptor like B) Heterocephalus glaber
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Symbol: Fcrlb
Name: Fc receptor like B
RGD ID: 18933572
Description: INVOLVED IN negative regulation of immune response (ortholog); ASSOCIATED WITH autoimmune interstitial lung, joint, and kidney disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fc receptor-like B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624826143,247 - 147,526 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624826141,409 - 147,668 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Fcrlb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624826143,247 - 147,526 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624826141,409 - 147,668 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FCRLB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,721,544 - 161,728,143 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1161,721,544 - 161,728,143 (+)EnsemblGRCh38hg38GRCh38
GRCh371161,691,334 - 161,697,933 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361159,959,081 - 159,964,557 (+)NCBINCBI36Build 36hg18NCBI36
Celera1134,795,903 - 134,801,378 (+)NCBICelera
Cytogenetic Map1q23.3NCBI
HuRef1132,936,998 - 132,942,472 (+)NCBIHuRef
CHM1_11163,114,257 - 163,119,734 (+)NCBICHM1_1
T2T-CHM13v2.01161,065,867 - 161,072,464 (+)NCBIT2T-CHM13v2.0
Fcrlb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,734,284 - 170,741,396 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,734,842 - 170,740,510 (-)EnsemblGRCm39 Ensembl
GRCm381170,906,715 - 170,913,829 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,907,273 - 170,912,941 (-)EnsemblGRCm38mm10GRCm38
MGSCv371172,837,404 - 172,843,072 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361172,743,948 - 172,749,616 (-)NCBIMGSCv36mm8
Celera1173,355,542 - 173,361,196 (-)NCBICelera
Cytogenetic Map1H3NCBI
cM Map177.56NCBI
Fcrlb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81385,681,403 - 85,689,880 (-)NCBIGRCr8
mRatBN7.21383,148,685 - 83,157,157 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1383,149,751 - 83,155,957 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1385,769,635 - 85,775,146 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01387,063,103 - 87,068,617 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01384,300,968 - 84,306,440 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01389,284,801 - 89,293,266 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1389,285,998 - 89,291,371 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01393,897,175 - 93,904,551 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41386,764,537 - 86,770,041 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1382,802,640 - 82,808,144 (-)NCBICelera
Cytogenetic Map13q24NCBI
Fcrlb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546214,591,877 - 14,596,418 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546214,591,367 - 14,597,183 (-)NCBIChiLan1.0ChiLan1.0
FCRLB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2188,058,650 - 88,064,537 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1187,726,984 - 87,732,036 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01137,134,362 - 137,140,232 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11140,933,226 - 140,939,805 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1140,934,358 - 140,939,324 (+)Ensemblpanpan1.1panPan2
FCRLB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13820,943,351 - 20,950,836 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3820,995,264 - 21,001,636 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03821,026,203 - 21,032,614 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3821,026,194 - 21,032,593 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13820,998,202 - 21,004,571 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03821,351,224 - 21,357,594 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03821,627,399 - 21,633,773 (-)NCBIUU_Cfam_GSD_1.0
Fcrlb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050587,608,819 - 7,613,625 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004937131128,260 - 132,589 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004937131128,256 - 132,577 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FCRLB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl488,833,651 - 88,839,308 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1488,832,726 - 88,839,308 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2496,850,087 - 96,856,376 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FCRLB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1202,344,021 - 2,351,838 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl202,344,502 - 2,349,502 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660381,386,705 - 1,392,809 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004865153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01082355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSHGLT00000027812   ⟹   ENSHGLP00000027569
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624826143,247 - 147,526 (+)Ensembl
RefSeq Acc Id: XM_004865153   ⟹   XP_004865210
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624826141,409 - 147,668 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004865210 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000027569
RefSeq Acc Id: XP_004865210   ⟸   XM_004865153
- UniProtKB: A0AAX6Q4G8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000027569   ⟸   ENSHGLT00000027812


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000019604 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000027812 ENTREZGENE
NCBI Gene Fcrlb ENTREZGENE
UniProt A0AAX6Q4G8 ENTREZGENE, UniProtKB/TrEMBL