Plin3 (perilipin 3) - Rat Genome Database

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Gene: Plin3 (perilipin 3) Heterocephalus glaber
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Symbol: Plin3
Name: perilipin 3
RGD ID: 18932357
Description: INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN lipid droplet (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: perilipin-3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248284,950,718 - 4,961,177 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248284,949,913 - 4,961,529 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Plin3Naked Mole-RatExperimental Liver Cirrhosis  ISOPLIN3 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:25380136


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Plin3Naked Mole-Ratcellular response to glucose starvation involved_inISOPLIN3 (Homo sapiens)9068941 PMID:34077757UniProtPMID:34077757
Plin3Naked Mole-Ratlipid droplet disassembly involved_inISOPLIN3 (Homo sapiens)9068941 PMID:34077757UniProtPMID:34077757
Plin3Naked Mole-Ratlipid storage involved_inIEAPANTHER:PTN000361439 and PANTHER:PTN000361440150520179 TreeGrafterGO_REF:0000118
Plin3Naked Mole-Ratpositive regulation of triglyceride storage involved_inIEAPANTHER:PTN000361439 and PANTHER:PTN000361440150520179 TreeGrafterGO_REF:0000118

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Plin3Naked Mole-Ratcytosol located_inIEAPANTHER:PTN000361439 and PANTHER:PTN000361440150520179 TreeGrafterGO_REF:0000118
Plin3Naked Mole-Ratlipid droplet located_inIEAUniProtKB-SubCell:SL-0154150520179 UniProtGO_REF:0000044
Plin3Naked Mole-Ratlipid droplet located_inIEAPANTHER:PTN000361439 and PANTHER:PTN000361440150520179 TreeGrafterGO_REF:0000118
Plin3Naked Mole-Ratlipid droplet located_inIEAUniProtKB-KW:KW-0551150520179 UniProtGO_REF:0000043
Plin3Naked Mole-Ratlipid droplet part_ofISOPLIN3 (Homo sapiens)9068941 PMID:34077757UniProtPMID:34077757

Molecular Function

  

PMID:30032202  



Plin3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248284,950,718 - 4,961,177 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248284,949,913 - 4,961,529 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PLIN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38194,838,341 - 4,867,667 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl194,838,341 - 4,867,694 (-)EnsemblGRCh38hg38GRCh38
GRCh37194,838,353 - 4,867,679 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36194,789,346 - 4,818,676 (-)NCBINCBI36Build 36hg18NCBI36
Build 34194,789,345 - 4,818,676NCBI
Celera194,776,278 - 4,805,688 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef194,600,618 - 4,630,086 (-)NCBIHuRef
CHM1_1194,837,970 - 4,867,350 (-)NCBICHM1_1
T2T-CHM13v2.0194,823,835 - 4,853,154 (-)NCBIT2T-CHM13v2.0
Plin3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391756,585,962 - 56,597,511 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1756,584,476 - 56,599,873 (-)EnsemblGRCm39 Ensembl
GRCm381756,278,962 - 56,290,511 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1756,277,476 - 56,292,873 (-)EnsemblGRCm38mm10GRCm38
MGSCv371756,418,385 - 56,429,934 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361755,912,671 - 55,924,220 (-)NCBIMGSCv36mm8
Celera1760,640,285 - 60,644,348 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.25NCBI
Plin3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr891,198,336 - 1,210,212 (-)NCBIGRCr8
mRatBN7.291,111,178 - 1,123,057 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,102,366 - 1,123,147 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx91,556,854 - 1,568,721 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.096,904,847 - 6,916,723 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.095,861,896 - 5,873,763 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0910,769,739 - 10,781,659 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,773,901 - 10,781,109 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,761,407 - 9,773,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,386,939 - 7,398,847 (+)NCBICelera
Cytogenetic Map9q11NCBI
Plin3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554954,177,906 - 4,193,299 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554954,177,701 - 4,190,052 (+)NCBIChiLan1.0ChiLan1.0
PLIN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2209,232,586 - 9,262,057 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1198,461,880 - 8,491,353 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0193,857,506 - 3,886,274 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,808,510 - 4,835,180 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl194,808,512 - 4,835,180 (-)Ensemblpanpan1.1panPan2
PLIN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12054,919,034 - 54,938,665 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2054,924,149 - 54,938,167 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2054,643,558 - 54,663,086 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02055,573,514 - 55,593,014 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2055,573,654 - 55,593,905 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12054,634,911 - 54,654,418 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02055,115,470 - 55,134,989 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02055,313,396 - 55,332,913 (+)NCBIUU_Cfam_GSD_1.0
Plin3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118214,992,322 - 215,005,247 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365882,829,282 - 2,842,501 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365882,829,536 - 2,842,427 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLIN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl273,969,862 - 73,995,529 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1273,970,149 - 73,995,314 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Pig Cytomap2q22-q23NCBI
PLIN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.164,538,877 - 4,565,595 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660813,581,430 - 3,610,593 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Ensembl Acc Id: ENSHGLT00000024407   ⟹   ENSHGLP00000024188
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248284,950,718 - 4,961,177 (+)Ensembl
RefSeq Acc Id: XM_021245060   ⟹   XP_021100719
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248284,949,913 - 4,961,529 (+)NCBI
Protein RefSeqs XP_021100719 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000024188
GenBank Protein JAO02381 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021100719   ⟸   XM_021245060
- UniProtKB: A0AAX6RW70 (UniProtKB/TrEMBL),   A0A0P6JE98 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000024188   ⟸   ENSHGLT00000024407



1 to 13 of 13 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSHGLG00000017239 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000024407 ENTREZGENE
Gene3D-CATH Flagellar protein FliS UniProtKB/TrEMBL
  Perilipin, alpha-beta domain UniProtKB/TrEMBL
InterPro Perilipin UniProtKB/TrEMBL
NCBI Gene Plin3 ENTREZGENE
PANTHER PERILIPIN UniProtKB/TrEMBL
  PERILIPIN-3 UniProtKB/TrEMBL
Pfam Perilipin UniProtKB/TrEMBL
PIRSF PAT UniProtKB/TrEMBL
Superfamily-SCOP Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain UniProtKB/TrEMBL
UniProt A0A0P6JE98 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6RW70 ENTREZGENE, UniProtKB/TrEMBL
1 to 13 of 13 rows