Eef1akmt3 (EEF1A lysine methyltransferase 3) - Rat Genome Database

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Gene: Eef1akmt3 (EEF1A lysine methyltransferase 3) Heterocephalus glaber
Analyze
Symbol: Eef1akmt3
Name: EEF1A lysine methyltransferase 3
RGD ID: 18929933
Description: ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN methylation (inferred); ASSOCIATED WITH familial melanoma (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: methyltransferase like 21B; methyltransferase-like protein 21B; Mettl21b; Protein FAM119B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,164,844 - 10,171,639 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,163,086 - 10,171,665 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
methylation  (IEA)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Eef1akmt3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,164,844 - 10,171,639 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,163,086 - 10,171,665 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
EEF1AKMT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,772,614 - 57,782,541 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,771,492 - 57,782,541 (+)EnsemblGRCh38hg38GRCh38
GRCh371258,166,397 - 58,176,324 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,452,650 - 56,462,591 (+)NCBINCBI36Build 36hg18NCBI36
Celera1257,823,978 - 57,833,935 (+)NCBICelera
Cytogenetic Map12q14.1NCBI
HuRef1255,203,222 - 55,213,181 (+)NCBIHuRef
CHM1_11258,134,187 - 58,144,130 (+)NCBICHM1_1
T2T-CHM13v2.01257,740,963 - 57,750,909 (+)NCBIT2T-CHM13v2.0
Eef1akmt3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910126,868,654 - 126,877,883 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10126,866,873 - 126,877,382 (-)EnsemblGRCm39 Ensembl
GRCm3810127,032,806 - 127,042,014 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,031,004 - 127,041,513 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710126,469,961 - 126,478,450 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,435,854 - 126,444,884 (-)NCBIMGSCv36mm8
Celera10129,424,819 - 129,433,293 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
Eef1akmt3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8764,738,726 - 64,749,904 (-)NCBIGRCr8
mRatBN7.2762,853,304 - 62,864,558 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl762,854,899 - 62,864,617 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0770,320,845 - 70,328,452 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,321,077 - 70,328,148 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,496,662 - 70,506,136 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera759,998,896 - 60,007,857 (-)NCBICelera
Cytogenetic Map7q22NCBI
Eef1akmt3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,482,548 - 5,487,615 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,482,524 - 5,488,040 (+)NCBIChiLan1.0ChiLan1.0
TSFM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,536,392 - 36,558,355 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,534,418 - 36,565,211 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,123,500 - 31,154,310 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,404,044 - 31,414,606 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,404,783 - 31,415,595 (-)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl1231,379,302 - 31,404,578 (-)Ensemblpanpan1.1panPan2
Eef1akmt3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494556,952,832 - 56,961,638 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,908,619 - 1,917,330 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,908,581 - 1,917,376 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EEF1AKMT3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl523,063,109 - 23,072,849 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1523,063,114 - 23,087,009 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
EEF1AKMT3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,685,432 - 53,695,666 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,686,085 - 53,693,779 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,265,808 - 192,276,043 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000019796   ⟹   ENSHGLP00000019600
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462480210,164,844 - 10,171,639 (-)Ensembl
RefSeq Acc Id: XM_004861166   ⟹   XP_004861223
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462480210,163,086 - 10,171,665 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004861223 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB07625 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000019600
GenBank Protein JAN99056 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004861223   ⟸   XM_004861166
- UniProtKB: G5BEB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000019600   ⟸   ENSHGLT00000019796


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014041 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000019796 ENTREZGENE
Gene3D-CATH 3.40.50.150 UniProtKB/TrEMBL
InterPro Methyltransf_16 UniProtKB/TrEMBL
  SAM-dependent_MTases UniProtKB/TrEMBL
KEGG Report hgl:101699642 UniProtKB/TrEMBL
NCBI Gene Eef1akmt3 ENTREZGENE
PANTHER EEF1A LYSINE METHYLTRANSFERASE 3 UniProtKB/TrEMBL
  PTHR14614 UniProtKB/TrEMBL
Pfam Methyltransf_16 UniProtKB/TrEMBL
Superfamily-SCOP SSF53335 UniProtKB/TrEMBL
UniProt G5BEB4 ENTREZGENE, UniProtKB/TrEMBL